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<h3>This tool, named “CARE” - Chassis Assessment & Risk Evaluation <br> includes information of more than 20+ microorganisms:</h3> | <h3>This tool, named “CARE” - Chassis Assessment & Risk Evaluation <br> includes information of more than 20+ microorganisms:</h3> | ||
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− | <p style="font-size: 14px"> <b>● The microorganisms from the Edinburgh OG 2016 iGEM team: the cyanobacterium <i>Synechosistis sp.</i> PCC 6803, the bacterium <i>Rhodococcus jostii</i> RHA1 and the fungus <i>Penicillium roquefortii</i>. | + | <p style="font-size: 14px"> <br><b>● The microorganisms from the Edinburgh OG 2016 iGEM team: the cyanobacterium <i>Synechosistis sp.</i> PCC 6803, the bacterium <i>Rhodococcus jostii</i> RHA1 and the fungus <i>Penicillium roquefortii</i>. |
<br><br>● The non-model organisms used by iGEM teams based in North America in 2014 and 2015 (as documented by the Yale 2015 iGEM team): <i>Chlamydomonas reinhardtii, Chlorella kessleri, Chlorella vulgaris, Flavobacterium psychrophilum, Gilliamella apicola, Lactococcus lactis, Rhizobium tropici</i> CIAT 899, <i>Snodgrassella alvi</i> and <i>Synechococcus sp.</i> PCC 7002. | <br><br>● The non-model organisms used by iGEM teams based in North America in 2014 and 2015 (as documented by the Yale 2015 iGEM team): <i>Chlamydomonas reinhardtii, Chlorella kessleri, Chlorella vulgaris, Flavobacterium psychrophilum, Gilliamella apicola, Lactococcus lactis, Rhizobium tropici</i> CIAT 899, <i>Snodgrassella alvi</i> and <i>Synechococcus sp.</i> PCC 7002. | ||
<br><br>● The industrially relevant <i>Shewanella oneidensis, Saccharopolyspora erythraea, Myxococcus xanthus, Cupriavidus necator, Chromobacterium violaceum, Carnobacterium maltaromaticum, Sorangium cellulosum</i> and <i>Pseudomonas fluorescens</i>. | <br><br>● The industrially relevant <i>Shewanella oneidensis, Saccharopolyspora erythraea, Myxococcus xanthus, Cupriavidus necator, Chromobacterium violaceum, Carnobacterium maltaromaticum, Sorangium cellulosum</i> and <i>Pseudomonas fluorescens</i>. | ||
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− | <p style="font-size: | + | <p style="font-size: 16px"><br> Along with these microorganisms, a database with the related secondary metabolites information (the general class of secondary metabolite, the most similar biosynthetic gene cluster (BGC) related to the secondary metabolite, its location in the genome and the percentage of gene similarity for each annotated microorganism) was constructed using the Antibiotics & Secondary Metabolite Analysis Shell (antiSMASH) software. |
<br><br>It is worth mentioning that the databases can be updated by integrating new microorganisms or editing existing ones simply by logging-in and waiting for the validation of the data by the program administrators. | <br><br>It is worth mentioning that the databases can be updated by integrating new microorganisms or editing existing ones simply by logging-in and waiting for the validation of the data by the program administrators. | ||
</div> | </div> |
Revision as of 04:04, 19 October 2016
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