Difference between revisions of "Team:Hong Kong UCCKE/Basic Part"

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<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2016.igem.org/Judging/Awards#Special_Prizes">basic part special prize</a>. </p>
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                    <h1 data-toc-skip>UCCKE / Basic Part</h1>
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                    <p>In this page, you can get an overall image of our composite parts</p>
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<p> Delete this box in order to be evaluated for this medal. See more information at <a href="https://2016.igem.org/Judging/Pages_for_Awards/Instructions"> Instructions for Pages for awards</a>.</p>
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<h2 style="margin-top:0; padding-top:0;">Introduction</h2>
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                    <p style="text-align:left !important; font-size: 15px !important;">lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum lorem ipsum <br><br></p>
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<h2 style="margin-top:0; padding-top:0;">K1889006</h2>
  
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                <p style="text-align:left !important; font-size: 15px !important;"><b>Protein Coding Sequence for Amino Acid Deaminase Gene</b><br></p>
  
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              <p style="text-align:left !important; font-size: 15px !important;">K1889007 is a gene coding for an amino acid deaminase gene. It is derived from Proteus mirabilis. It functions to turn phenylalanine into phenylpyruvic acid by removing its amino group, coming from the enzyme family that catalyzes the breakdown of amino acids into alpha-keto acids. In our experiment, this gene is used to turn phenylalanine, a naturally occurring amino acid in E. coli, into phenylpyruvic acid. The phenylpyruvic acid then acts as an attractant to C. elegans.<br><br></p>
  
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<img src="https://static.igem.org/mediawiki/parts/2/20/Team-Hong_Kong_UCCKE_2016_img24rfjui45t98u5.jpeg" style="width:100%; max-width:600px;"><br><br>
  
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              <p style="text-align:left !important; font-size: 15px !important;">The sequence of the gene was referenced from an article from Journal of Bacteriology, titled “Proteus mirabilis amino acid deaminase: cloning, nucleotide sequence, and characterization of aad.” The DNA sequence was slightly modified to allow its chemical synthesis by IDT while still retaining the original amino acid sequence.<br><br></p>
  
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              <p style="text-align:left !important; font-size: 15px !important;">Massad, G., Zhao, H., & Mobley, H. L. (1995). Proteus mirabilis amino acid deaminase: cloning, nucleotide sequence, and characterization of aad. Journal of Bacteriology, 177(20), 5878–5883.</p>
  
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A <b>basic part</b> is a functional unit of DNA that cannot be subdivided into smaller component parts. <a href="http://parts.igem.org/wiki/index.php/Part:BBa_R0051">BBa_R0051</a> is an example of a basic part, a promoter regulated by lambda cl.
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<p>Most genetically-encoded functions have not yet been converted to BioBrick parts. Thus, there are <b>many</b> opportunities to find new, cool, and important genetically encoded functions, and refine and convert the DNA encoding these functions into BioBrick standard biological parts. </p>
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<h4>Note</h4>
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<p>This page should list all the basic parts your team has made during your project. You must add all characterization information for your parts on the Registry. You should not put characterization information on this page.</p>
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Revision as of 07:56, 19 October 2016

Introduction

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K1889006

Protein Coding Sequence for Amino Acid Deaminase Gene

K1889007 is a gene coding for an amino acid deaminase gene. It is derived from Proteus mirabilis. It functions to turn phenylalanine into phenylpyruvic acid by removing its amino group, coming from the enzyme family that catalyzes the breakdown of amino acids into alpha-keto acids. In our experiment, this gene is used to turn phenylalanine, a naturally occurring amino acid in E. coli, into phenylpyruvic acid. The phenylpyruvic acid then acts as an attractant to C. elegans.



The sequence of the gene was referenced from an article from Journal of Bacteriology, titled “Proteus mirabilis amino acid deaminase: cloning, nucleotide sequence, and characterization of aad.” The DNA sequence was slightly modified to allow its chemical synthesis by IDT while still retaining the original amino acid sequence.

Massad, G., Zhao, H., & Mobley, H. L. (1995). Proteus mirabilis amino acid deaminase: cloning, nucleotide sequence, and characterization of aad. Journal of Bacteriology, 177(20), 5878–5883.