Difference between revisions of "Team:USTC-Software/NoteBook"

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<a href="https://2016.igem.org/Team:USTC-Software/Project">Project</a>
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<a href="https://2016.igem.org/Team:USTC-Software/Notebook">Notebook</a>
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<a href="#HFUT-China">HFUT-China</a>
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                    <li><a href="https://2016.igem.org/Team:USTC-Software/Members">Members</a></li>
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<a href="#USTC">USTC</a>
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<a href="#SJTU-Software">SJTU-Software</a>
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            <div id="timeline"></div>
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            <section id="section1">
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                <h2>2015.11.01</h2>
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                <p>Begin to recruit team members.</p>
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                <h2>2015.11.24</h2>
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                <p>Preliminary investigation of iGEM.</p>
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<h1><a href="#HFUT-China">HFUT-China</a></h1>
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                <img src="http://placehold.it/299x220">
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We are invited to test the front end of the project of the team HFUT-China for finding bugs and fix them. We found four bugs and design flaws.
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            <section id="section3">
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                <h2>2016.01.25</h2>
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<span style="font-weight:bold">1.</span> When we clicked the button on the 'project' page to expand the gene chain list and delete designated gene chain, it might occasionally fail to delete although a notice of successful deletion is displayed. We discovered that it was caused by transaction locks of the database, which led to a failed concurrent Ajax request. This failure cannot be detected by the program, which would not stop the front end popping a successful notice.
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                <p>Begin to learn Synthetic Biology and recommend every one to learn difference things based on their interest.</p>
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</p>
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                <p>Such as someone who want to join back end, he should learn python, github and so on.</p>
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<p>
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                <img src="http://placehold.it/299x220">
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<span style="font-weight:bold">2.</span> The dragging-up of the recommending gene chain in the 'design' page might fail occasionally and the dragging function collapsed meanwhile until we refreshed it. It was diagnosed that problems were gestated in the interaction between the action scopes of AngularJS and NG-sortable database. We fixed it once after the bug was detected.
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            <section id="section4">
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<span style="font-weight:bold">3.</span> We found that there was not a clear button for registration, which made it difficult for users to register. It might affect the user experience.
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                <h2>2016.02.28</h2>
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</p>
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                <p>First formal meeting , start to research the previous projects and set up five groups: back end, front end, biology, wiki and art.</p>
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<p>
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                <img src="http://placehold.it/299x220">
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<span style="font-weight:bold">4.</span> Expanding the relationship network in the 'gene relationship' page may lead to the overlapping of the balls of surrounding genes.
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                <div class="timeline-section"></div>
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            <section id="section5">
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We spent days on fixing bugs above and succeeded eventually. This experience contributed much on strengthening the bond between the team HFUT-China and us.
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                <h2>2016.03.09</h2>
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</p>
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                <p>Second formal meeting , we discussed lots of ideas. Such as a game that can solve biology problems, design RNA and so on.</p>
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            </section>
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<img src="https://static.igem.org/mediawiki/2016/7/75/T--USTC-Software--collaborations06.jpg" />
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                <h2>2016.03.17</h2>
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                <p>Third formal meeting. our team elected the leader and manager. Determine the members of each group.</p>
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                <img src="http://placehold.it/299x220">
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<h1><a href="#USTC">USTC</a></h1>
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                <h2>2016.03.30</h2>
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<p>
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                <p>Fourth formal meeting, start reading some papers. And determine meeting style, each meeting every group had 5-10 minutes to display what they did. Then, the group had their own meeting to discuss the problems and try to solve them.</p>
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The procedure of the team USTC involved processing images of fluorescent cells. However, it required distinguishing the part of fluorescent cells from those non-fluorescent ones and the background as the pretreatment.
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We calculated the distribution of the greyscale of images. Based on the distribution, we can determine which pixels may belong to fluorescent cells and which pixels may not.
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            <section>
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</p>
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                <h2>2016.04.10</h2>
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<p>
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                <p>Fifth formal meeting, Biological group report their research. We discussed the feasibility of each idea, and we determine several topics.</p>
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Therefore we are able to cut out the part of fluorescent cells from remainders, which helped the team USTC solve this little tiresome problem.
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<img src="https://static.igem.org/mediawiki/2016/2/26/T--USTC-Software--collaborations01.jpg" />
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                <h2>2016.04.20</h2>
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</div>
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                <p>Sixth formal meeting, continue discuss the topic of our project. And we decided to make a software based on web page. Meanwhile, We discuss the human practice of Science and Technology Week. And we designed the questionnaire.</p>
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            <section>
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<img src="https://static.igem.org/mediawiki/2016/d/df/T--USTC-Software--collaborations03.jpg" />
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                <h2>2016.05.14</h2>
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                <p>Science and Technology Week begin, we  introduced elementary knowledge of genetics to citizens by poster presentation and distribute questionnaire.</p>
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<div class="row ar2" id="SJTU-Software" data-magellan-target="SJTU-Software">
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                <h2>2016.5.28</h2>
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<h1><a href="#SJTU-Software">SJTU-Software</a></h1>
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                <p>After discuss with our PI Professor Liu Haiyan, we decided to continue the work of 2014 USTC-Software, We named our project biopano2.0. We discussed together. Front-end and Back-end groups evaluated Project group’s ideas in the possibility of technology.</p>
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<p>
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                <img src="http://placehold.it/299x220">
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We accepted the invitation from the team SJTU-Software to fill out their questionnaires. They told us that our opinions and advices on their project really mattered, which we were truly glad to see.
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</p>
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            <section>
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</div>
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                <h2>2016.6.01</h2>
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</div>
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                <p>We applied a working place in the library, the 204 room.</p>
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                <img src="http://placehold.it/299x220">
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<footer class="row ar1">
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<hr />
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                <h2>2016.6.28</h2>
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<div class="column small-12 large-2 large-offset-1 ar0">
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                <p>Summer vacation begin.Publish the standard for selecting memebers for the Giant Jambore. Every group working hard.</p>
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<img src="http://placehold.it/240x240.png" />
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<div class="column small-12 large-2 large-offset-2 ar1">
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            <section>
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                <h2>2016.7.5</h2>
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<h2>Links</h2>
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                <p>Sixth formal meeting, we decided our project should be easily extened. And we discussed more functions.</p>
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<p><a href="www.ustc.edu.cn">USTC</a></p>
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                <img src="http://placehold.it/299x220">
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<p><a href="www.ustc.edu.cn">USTC</a></p>
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                <div class="timeline-section"></div>
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<p><a href="www.ustc.edu.cn">USTC</a></p>
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<p><a href="www.ustc.edu.cn">USTC</a></p>
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            <section>
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</div>
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                <h2>2016.7.25</h2>
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                <p>Great summer.</p>
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<div class="column small-12 large-2 large-offset-1 end ar2">
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                <img src="http://placehold.it/299x220">
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<hr />
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                <div class="timeline-section"></div>
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<h2>Contact Us</h2>
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            </section>
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<p>96, Jinzhai RD.</p>
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            <section>
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<p>Baohe DST.</p>
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                <h2>2016.8.7</h2>
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<p>Hefei, Anhui, PRC</p>
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                <p>Attended Asia-Pacific iGEM Conference in Taiwan.</p>
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</div>
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<script type="text/javascript" src="https://2016.igem.org/Template:USTC-Software/js/scrollmagic?action=raw&ctype=text/javascript"></script>
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                <h2>2016.8.17</h2>
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<script type="text/javascript" src="https://2016.igem.org/Template:USTC-Software/js/wikipage?action=raw&ctype=text/javascript"></script>
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                <p>Select members for the Giant Jamboree.</p>
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            <section>
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                <h2>2016.8.26</h2>
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                <p>Went to ShangHai to apply for visas.</p>
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            <section>
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                <h2>2016.9.4</h2>
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                <p>First meeting of new semester, each group introduced their schedule, and we discussed our time table. We decided to do abacus.</p>
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            <section>
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                <h2>2016.9.30</h2>
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                <p>We introduce our software to schoolmates who major in biology. And we gain some feedback.</p>
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            <section>
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                <h2>2016.10.2</h2>
 +
                <p>we begin to make docker. Front-end and Back-end started system integration test.</p>
 +
                <img src="http://placehold.it/299x220">
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                <div class="timeline-section"></div>
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            </section>
 +
            <section>
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                <h2>2016.10.6</h2>
 +
                <p>We submit our team banner.</p>
 +
                <img src="http://placehold.it/299x220">
 +
                <div class="timeline-section"></div>
 +
            </section>
 +
            <section>
 +
                <h2>2016.10.13</h2>
 +
                <p>We finished our judging form.</p>
 +
                <img src="http://placehold.it/299x220">
 +
                <div class="timeline-section"></div>
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            </section>
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        </main>
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    </div>
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    <footer class="row ar1">
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        <div class="column small-12 large-2 large-offset-1 ar0">
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        <div class="column small-12 large-2 large-offset-2 ar1">
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            <hr />
 +
            <h2>Links</h2>
 +
            <p><a href="www.ustc.edu.cn">USTC</a></p>
 +
            <p><a href="www.ustc.edu.cn">USTC</a></p>
 +
            <p><a href="www.ustc.edu.cn">USTC</a></p>
 +
            <p><a href="www.ustc.edu.cn">USTC</a></p>
 +
        </div>
 +
        <div class="column small-12 large-2 large-offset-1 end ar2">
 +
            <hr />
 +
            <h2>Contact Us</h2>
 +
            <p>96, Jinzhai RD.</p>
 +
            <p>Baohe DST.</p>
 +
            <p>Hefei, Anhui, PRC</p>
 +
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 +
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Latest revision as of 11:04, 19 October 2016

2015.11.01

Begin to recruit team members.

2015.11.24

Preliminary investigation of iGEM.

2016.01.25

Begin to learn Synthetic Biology and recommend every one to learn difference things based on their interest.

Such as someone who want to join back end, he should learn python, github and so on.

2016.02.28

First formal meeting , start to research the previous projects and set up five groups: back end, front end, biology, wiki and art.

2016.03.09

Second formal meeting , we discussed lots of ideas. Such as a game that can solve biology problems, design RNA and so on.

2016.03.17

Third formal meeting. our team elected the leader and manager. Determine the members of each group.

2016.03.30

Fourth formal meeting, start reading some papers. And determine meeting style, each meeting every group had 5-10 minutes to display what they did. Then, the group had their own meeting to discuss the problems and try to solve them.

2016.04.10

Fifth formal meeting, Biological group report their research. We discussed the feasibility of each idea, and we determine several topics.

2016.04.20

Sixth formal meeting, continue discuss the topic of our project. And we decided to make a software based on web page. Meanwhile, We discuss the human practice of Science and Technology Week. And we designed the questionnaire.

2016.05.14

Science and Technology Week begin, we  introduced elementary knowledge of genetics to citizens by poster presentation and distribute questionnaire.

2016.5.28

After discuss with our PI Professor Liu Haiyan, we decided to continue the work of 2014 USTC-Software, We named our project biopano2.0. We discussed together. Front-end and Back-end groups evaluated Project group’s ideas in the possibility of technology.

2016.6.01

We applied a working place in the library, the 204 room.

2016.6.28

Summer vacation begin.Publish the standard for selecting memebers for the Giant Jambore. Every group working hard.

2016.7.5

Sixth formal meeting, we decided our project should be easily extened. And we discussed more functions.

2016.7.25

Great summer.

2016.8.7

Attended Asia-Pacific iGEM Conference in Taiwan.

2016.8.17

Select members for the Giant Jamboree.

2016.8.26

Went to ShangHai to apply for visas.

2016.9.4

First meeting of new semester, each group introduced their schedule, and we discussed our time table. We decided to do abacus.

2016.9.30

We introduce our software to schoolmates who major in biology. And we gain some feedback.

2016.10.2

we begin to make docker. Front-end and Back-end started system integration test.

2016.10.6

We submit our team banner.

2016.10.13

We finished our judging form.

Links

USTC

USTC

USTC

USTC

Contact Us

96, Jinzhai RD.

Baohe DST.

Hefei, Anhui, PRC