Difference between revisions of "Team:NYMU-Taipei/Demonstrate"

 
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<h1>Prototype</h1></div>
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<h1>Prototype</h1></div>
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<h1 style="margin-top:30px; margin-bottom:0px; height:50px;">Integrated Orchard Safeguard</h1></div>
 
<h1 style="margin-top:30px; margin-bottom:0px; height:50px;">Integrated Orchard Safeguard</h1></div>
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<h2 style="margin-top:20px; margin-bottom:10px;">Overview</h2><hr />
 
<h2 style="margin-top:20px; margin-bottom:10px;">Overview</h2><hr />
  
<p style="font-size:16px;">Current method of applying entomogenous fungal pesticides is to suspend fungal spores into a solution and introduced through large-scaled spraying. However, with genetically engineered fungi, the contemporary biopesticide deployment method risk damaging the eco-system from the residual fungi. Our project is divided into two main focuses. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team try to avoid the risk of large-scaled pesticide spraying by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap. </p>
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<p style="font-size:16px;">Current method of applying entomogenous fungal pesticides is large-scaled spraying fungal spore solution. However, deployment of genetically engineered fungal pesticides using contemporary methods puts the local eco-system at risk of disruption by the residual fungi.</p>
  
<p style="font-size:16px;">In modern bait traps, the bait only attract B. dorsalis. However, it is female flies that is responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection of female flies via copulation. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with a smartphone app that receives data from the IR counter.</p>
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<p style="font-size:16px;">Our project is divided into two main focuses to neutralize these risks. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team attempt introduce an alternative to large-scaled spraying of genetically modified biopesticide by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap.</p>
  
<p style="font-size:16px;">We present the Integrated Orchard Safeguard, a informative defense system that links our <font color="#FF0000"><b>bait trap, IR counter, and smartphone app.</b></font></p>
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<p style="font-size:16px;">In modern bait traps, the bait only attract male <i>B. dorsalis</i>. However, it is the females that are responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection to spread to the females via copulation with infected males. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with our smartphone app that receives data from the IR counter.</p>
  
<img src="https://static.igem.org/mediawiki/2016/a/a1/T--NYMU-Taipei--photo-OFF-related-14632532_120300000685765068_1524025076_o.png" width="100%" />
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<p style="font-size:16px;">We present the Integrated Orchard Safeguard, an information network system that connects our <font color="#FF0000"><b>bait trap, IR counter and smartphone app together.</b></font></p>
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<div align="center">
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<img src="https://static.igem.org/mediawiki/2016/c/cb/T--NYMU-Taipei--photo-OFF-related1-14795729_902665079864034_1263097426_o.png" width="80%" /></div>
  
 
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<h2 style="margin-top:30px; margin-bottom:10px;">Bait Trap</h2><hr />
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<h2 style="margin-top:30px; margin-bottom:10px;">New Generation Bait Trap</h2><hr />
  
<p style="font-size:16px;">After the bait trap receives the population size of oriental fruit fly from the IR counter, it will then <font color="#FF0000"><b>automatically regulate the frequency </b></font>of the spray of fungal spore solution and the opening duration of the door.</p>
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<p style="font-size:16px;">After the bait trap receives the population size information of <i>B. dorsalis</i> from the IR counter, it will then <font color="#FF0000"><b>automatically regulate the frequency </b></font>of the spray of fungal spore solution and the opening duration of the door.</p>
  
<div class="imageimage">
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<img src="https://static.igem.org/mediawiki/2016/9/91/T--NYMU-Taipei--photo-OFF-related-14628131_120300000688268755_160847704_n.jpg" width="100%" />
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<img src="https://static.igem.org/mediawiki/2016/3/34/T--NYMU-Taipei--%E4%B8%BB%E9%A0%81-prototype.jpg" width="50%" />
 
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</div>
  
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<h3 style="margin-top:30px; margin-bottom:10px;">Design</h3><br />
 
<h3 style="margin-top:30px; margin-bottom:10px;">Design</h3><br />
 
 
<img src="https://static.igem.org/mediawiki/2016/a/a7/T-NYMU-Taipei-photo-trap_1.png" width="100%" />
 
<img src="https://static.igem.org/mediawiki/2016/a/a7/T-NYMU-Taipei-photo-trap_1.png" width="100%" />
  
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</div>
 
</div>
  
<p style="font-size:16px;">The Arduino UNO in our design has combined with Appsduino's product, AppsBee Shield and Appsduino Shield. (The web site of Appsduino: http://appsduino.com/)</p>
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<p style="font-size:16px;">The Arduino UNO main chip in our design was combined with two additional Appsduino chips, AppsBee Shield and Appsduino Shield. (The web site of Appsduino: http://appsduino.com/)</p>
  
 
<h4 style="margin-top:30px; margin-bottom:10px;">2. The Second Layer – Motor</h4><br />
 
<h4 style="margin-top:30px; margin-bottom:10px;">2. The Second Layer – Motor</h4><br />
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<img src="https://static.igem.org/mediawiki/2016/c/c7/T-NYMU-Taipei-photo-roof.png" width="100%" /></div>
 
<img src="https://static.igem.org/mediawiki/2016/c/c7/T-NYMU-Taipei-photo-roof.png" width="100%" /></div>
 
<div style="position:relative; width:48%;">
 
<div style="position:relative; width:48%;">
<p style="font-size:16px;">We use the string attached to a ULN2003 motor to open and close the door.</p></div>
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<p style="font-size:16px;">We use the string attached to a ULN2003 stepper motor driver to open and close the door.
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</p></div>
 
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<img src="https://static.igem.org/mediawiki/2016/a/a9/T-NYMU-Taipei-photo-floor_1.png" width="100%" /></div>
 
<img src="https://static.igem.org/mediawiki/2016/a/a9/T-NYMU-Taipei-photo-floor_1.png" width="100%" /></div>
 
<div style="position:relative; width:48%;">
 
<div style="position:relative; width:48%;">
<p style="font-size:16px;">Since flying up is one of the behaviors of B. dorsalis, we set the <font color="#FF0000"><b>entrance</b></font> at the bottom of the trap to hinder the escape of trapped flies. The grower can pull out the drawer to refill the <font color="#FF0000"><b>methyl eugenol(a pheromone precursor)</b></font> to maintain the trap's attraction to male flies. The <font color="#FF0000"><b>atomization device</b></font> in the drawer sprays fungal spore solution to infect the trapped male flies.</p></div>
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<p style="font-size:16px;">Since flying up is one of the behaviors of <i>B. dorsalis</i>, we set the <font color="#FF0000"><b>entrance</b></font> at the bottom of the trap to hinder the escape of trapped flies. The grower can pull out the drawer to refill the <font color="#FF0000"><b>methyl eugenol(a pheromone precursor)</b></font> to maintain the trap's attraction to male flies. The <font color="#FF0000"><b>atomization device</b></font> in the drawer sprays fungal spore solution to infect the trapped male flies.</p></div>
 
</div>
 
</div>
  
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<h4 style="margin-top:30px; margin-bottom:10px;">1. Specificity - Methyl Eugenol</h4>
 
<h4 style="margin-top:30px; margin-bottom:10px;">1. Specificity - Methyl Eugenol</h4>
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
<font color="#FF0000"><b>Methyl Eugenol</b></font> is the <font color="#FF0000"><b>pheromone precursor</b></font> of B. dorsalis. It only attracts male flies. The male flies will fly away once they  have consumed enough Methyl Eugenol.
+
<font color="#FF0000"><b>Methyl Eugenol</b></font> is the <font color="#FF0000"><b>pheromone precursor</b></font> of <i>B. dorsalis</i>. It only attracts male flies. The male flies will fly away once they  have consumed enough Methyl Eugenol.
 
</p>
 
</p>
<h4 style="margin-top:30px; margin-bottom:10px;">2. Target main Problem – Female B. dorsalis</h4>
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<h4 style="margin-top:30px; margin-bottom:10px;">2. Target main Problem – Female <i>B. dorsalis</i></h4>
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
<font color="#FF0000"><b>female B. dorsalis</b></font> poses more threat than males.  
+
<font color="#FF0000"><b>Female <i>B. dorsalis</i></b></font> poses more threat than males.  
 
</p>
 
</p>
 
<h4 style="margin-top:30px; margin-bottom:10px;">3. Regulation – IR Counter, Trap, Phone App</h4>
 
<h4 style="margin-top:30px; margin-bottom:10px;">3. Regulation – IR Counter, Trap, Phone App</h4>
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
<font color="#FF0000"><b>Automatically regulation</b></font> of the spray frequency and door open duration depends on the data collected by the IR counter and phone APP.
+
<font color="#FF0000"><b>Automatic regulation</b></font> of the spray frequency and door opening duration depending on the data collected by the IR counter and phone APP.
 
</p>
 
</p>
 
<h4 style="margin-top:30px; margin-bottom:10px;">4. Eco-Friendly – Recycle </h4>
 
<h4 style="margin-top:30px; margin-bottom:10px;">4. Eco-Friendly – Recycle </h4>
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
Replacing the indissoluble plastic material (distributed by the government) with <font color="#FF0000"><b>recyclable wood chips</b></font>, which can reduce environmental pollution.
+
Replacing the indissoluble plastic material (distributed by the government) with <font color="#FF0000"><b>recyclable wood planks</b></font>, which can reduce environmental pollution.
 
</p>
 
</p>
  
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<div class="fund" align="center">
 
<div class="fund" align="center">
 
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<h3 style="margin-top:30px; margin-bottom:10px;">Mechanism</h3><br />
<h3 style="margin-top:30px; margin-bottom:10px;">Mechanism</h3><br>
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<img src="https://static.igem.org/mediawiki/2016/3/3d/T-NYMU-Taipei-photo-pipeline.jpg" width="60%" />
 
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<img src="https://static.igem.org/mediawiki/2016/3/3d/T-NYMU-Taipei-photo-pipeline.jpg" width="80%" />
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</div>
 
</div>
  
 
<div class="fund" align="center">
 
<div class="fund" align="center">
 
<h3 style="margin-top:30px; margin-bottom:10px;">Functionality Display Video</h3><br />
 
<h3 style="margin-top:30px; margin-bottom:10px;">Functionality Display Video</h3><br />
<iframe width="560" height="315" src="https://www.youtube.com/embed/-1yPsO4_5a4" frameborder="0" allowfullscreen ></iframe>
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<iframe width="560" height="315" src="https://www.youtube.com/embed/-1yPsO4_5a4" frameborder="0" allowfullscreen></iframe>
 
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</div>
 
</div>
  
 
<div class="fund">
 
<div class="fund">
 
<h2 style="margin-top:30px; margin-bottom:10px;">IR Counter & APP</h2><hr />
 
<h2 style="margin-top:30px; margin-bottom:10px;">IR Counter & APP</h2><hr />
 +
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
IR counter records and provides <font color="#FF0000"><b>real-time information</b></font> of the orchard : <font color="#FF0000"><b>pest group sizemeteorological data</b></font> including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.
+
IR counter records and provides <font color="#FF0000"><b>real-time information</b></font> of the orchard : <font color="#FF0000"><b>pest group size and meteorological data</b></font> including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.
 
</p>
 
</p>
<div class="imageimage">
+
 
<img src="https://static.igem.org/mediawiki/2016/6/69/T-NYMU-Taipei-photo-counter_in_field.jpg" width="100%" /></div>
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<div class="imageimage"><img src="https://static.igem.org/mediawiki/2016/6/69/T-NYMU-Taipei-photo-counter_in_field.jpg" width="100%" /></div>
 
</div>
 
</div>
  
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<img src="https://static.igem.org/mediawiki/2016/f/fe/T-NYMU-Taipei-photo-14741853_120300000623455056_66387865_n.jpg" width="80%" />
 
<img src="https://static.igem.org/mediawiki/2016/f/fe/T-NYMU-Taipei-photo-14741853_120300000623455056_66387865_n.jpg" width="80%" />
 
</div>
 
</div>
 
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<div class="fund">
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<h3 align="center" style="margin-top:30px; margin-bottom:10px;>Counter Microcontroller</h3>
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<img src="https://static.igem.org/mediawiki/2016/9/9e/14615770_902531213210754_6845015680555279181_o.jpg" width="80%" style="margin-left:10%;" />
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</div>
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<div class="fund" align="center">
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<h3 style="margin-top:30px; margin-bottom:10px;">Functionality Display Video</h3><br />
 +
<iframe width="560" height="315" src="https://www.youtube.com/embed/ceFHgCC9w7o" frameborder="0" allowfullscreen></iframe>
 
</div>
 
</div>
  
 
<div class="fund">
 
<div class="fund">
  
<h3 style="margin-top:30px; margin-bottom:10px;">Functional Test</h3>
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<h2 style="margin-top:30px; margin-bottom:10px;">Functional Test</h2><hr>
  
<div class="imageimage">
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<h3 style="margin-top:30px; margin-bottom:10px;">"Diameter of the tunnel that allows passage to one <i>B. dorsalis</i>" & IR counter</h3>
<div style="position:relative; width:48%;">
+
 
<img src="https://static.igem.org/mediawiki/2016/thumb/4/4d/T-NYMU-Taipei-photo-14647197_120300000625973835_1048154200_o.jpg/180px-T-NYMU-Taipei-photo-14647197_120300000625973835_1048154200_o.jpg" width="100%" /></div>
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<img src="https://static.igem.org/mediawiki/2016/c/c9/T-NYMU-Taipei-photo-Tunnel_experiment.JPG" width="90%" />
<div style="position:relative; width:48%;">
+
 
<p style="font-size:16px;">To <font color="#FF0000"><b>improve the accuracy</b></font> of counter, we tried to find the proper tunnel diameter allows only <font color="#FF0000"><b>one-by-one passage of B. dorsalis</b></font>. We prepared different size of straws to connect two centrifuge tubes. One contained male B. dorsalis, and the other contained the bait, methyl eugenol. </p></div>
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<p style="font-size:16px;">To <font color="#FF0000"><b>improve the accuracy</b></font> of counter, we tried to find the proper tunnel diameter allows only <font color="#FF0000"><b>one-by-one passage of <i>B. dorsalis</i></b></font>. We prepared different size of straws to connect two centrifuge tubes. One contained male <i>B. dorsalis</i>, and the other contained the bait, methyl eugenol. </p>
</div>
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</div>
 
</div>
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<div class="fund">
 
<h3 style="margin-top:30px; margin-bottom:10px;">Result</h3>
 
<h3 style="margin-top:30px; margin-bottom:10px;">Result</h3>
<p style="font-size:16px;">Results indicate that when the tunnel diameter is above <font color="#FF0000"><b>0.8 cm</b></font>, the flies can pass through.</p>
+
<p style="font-size:16px;">The results indicate that when the tunnel diameter is above <font color="#FF0000"><b>0.8 cm</b></font>, the flies can pass through.</p>
  
<table border="1" class="tablesatisfy">
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<div class="tablesatisfysp" style="overflow-x:auto;">
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<table border="1">
 
 <tr>
 
 <tr>
 
     <td>Diameter(cm)</td>
 
     <td>Diameter(cm)</td>
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 </tr>
 
 </tr>
 
</table>
 
</table>
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<div class="fund">
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<h3 style="margin-top:30px; margin-bottom:10px;">Twin Infection Rate experiments</h3>
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<p style="font-size:16px;">
 +
"Infecting <i>B. dorsalis</i> with wildtype <i>M. anisopliae</i>" and "infecting female <i>B. dorsalis</i> by copulation with infected male <i>B. dorsalis</i>" experiments link to each other. This not only confirm the fact that <i>M. anisopliae</i> can infect and eventually kill <i>B. dorsalis</i>, but also a NEW way of biological control through the use of males as infection vectors to infect the females.
 +
<br>
 +
The concentration that is the most effective in killing <i>B. dorsalis</i> is <font color="#FF0000"><b>1.6 × 10<sup>6</sup></font></b> (conidia/ ml).
 +
</p>
 +
<p style="font-size:16px;">
 +
The death rate of female <i>B. dorsalis</i> infected by <i>M. anisopliae</i> via copulation with infected males is <font color="#FF0000"><b>80%</b></font>.
 +
 +
<img src="https://static.igem.org/mediawiki/2016/c/c1/T-NYMU-Taipei-photo-Infection_experiment.JPG" width="100%" />
 +
<p style="font-size:16px;">The moment we change the day and night to the <i>B. dorsalis</i> during the infection rate experiment.</p>
  
 
<div class="tablesatisfysp" style="overflow-x:auto;">
 
<div class="tablesatisfysp" style="overflow-x:auto;">
 
<table border="1">
 
<table border="1">
 
 <tr>
 
 <tr>
     <td style="width:100px;">Diameter(cm)</td>
+
     <td>Number</td>
     <td style="width:50px;">2.00</td>
+
     <td>1</td>
     <td style="width:50px;">1.75</td>
+
     <td>2</td>
     <td style="width:50px;">1.50</td>
+
     <td>3</td>
     <td style="width:50px;">1.00</td>
+
     <td style="width:50px;">0.80</td>
+
     <td style="width:50px;">0.75</td>
+
     <td style="width:50px;">0.60</td>
+
 
 </tr>
 
 </tr>
 
 <tr>
 
 <tr>
     <td style="width:100px;">outcome</td>
+
     <td>Death rate</td>
     <td style="width:50px;">O</td>
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     <td>100%</td>
     <td style="width:50px;">O</td>
+
     <td>100%</td>
     <td style="width:50px;">O</td>
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     <td>40%</td>
     <td style="width:50px;">O</td>
+
     <td style="width:50px;">O</td>
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     <td style="width:50px;">Hardly</td>
+
     <td style="width:50px;">X</td>
+
 
 </tr>
 
 </tr>
 
</table>
 
</table>
 
</div>
 
</div>
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</div>
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<div class="fund">
  
 +
<h2 style="margin-top:30px; margin-bottom:10px;">Modeling Efficiency</h2><hr>
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<p style="font-size:16px;">A population size model of <i>B. dorsalis</i> was constructed to simulate a comparison of <i>B. dorsalis </i>population size between an IOS-protected orchard and a normal orchard. The results show <font color="#FF0000"><b>a significant decrease of 35% in <i>B. dorsalis</i> population</b></font> in an IOS-protected orchard compared to one without IOS.
 +
<br>
 +
<a href="https://2016.igem.org/Team:NYMU-Taipei/Project-Model">Link to modeling</a>
 +
</p>
 
</div>
 
</div>
  
 
<div class="fund">
 
<div class="fund">
<h2 style="margin-top:30px; margin-bottom:10px;">(尚未想好名字)</h2><hr>
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<h3 style="margin-top:30px; margin-bottom:10px;">Population size without IOS</h3><hr>
 +
<video src="https://static.igem.org/mediawiki/2016/b/bc/T-NYMU-Taipei-model-movie.mp4" controls autoplay width="100%"></video><br>
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Population size with IOS</h3><hr>
 +
<video src="https://static.igem.org/mediawiki/2016/d/d4/T-NYMU-Taipei-photo-model1mb.mp4" controls autoplay width="100%"></video<br>
 +
</div>
 +
 
 +
<div class="fund">
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<h3 style="margin-top:30px; margin-bottom:10px;">Expenditure Analysis</h3><hr>
 +
<p style="font-size:16px;">Based on our experimental deployment of counters and traps in an orchard one-hectare in size. The estimated total cost of IOS is listed below:</p>
 +
 
 +
<img src="https://static.igem.org/mediawiki/2016/d/d6/T--NYMU-Taipei--photo-media-analysis-%E5%9C%96%E7%89%871.png" width="70%">
 +
</div><br />
 +
 
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<div class="fund">
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<p style="font-size:16px;">It is estimated that orchard without any <i>B. dorsalis</i> treatment may incur lost up to 30% of fruit<sup>[1]</sup>. A few calculation was done based on the data from government, and it shows that the implementation of IOS can <font color="#FF0000"><b>reduce the agricultural loss by 25%</b></font>.  </p><br />
 +
 
 +
<img src="https://static.igem.org/mediawiki/2016/d/d0/T--NYMU-Taipei--photo-media-analysis-revenue_without_ios.png" width="70%" />
 +
<img src="https://static.igem.org/mediawiki/2016/6/60/T--NYMU-Taipei--photo-media-analysis-revenue_with_ios.png" width="70%" />
 +
<img src="https://static.igem.org/mediawiki/2016/8/81/T--NYMU-Taipei--photo-media-analysis-%E8%A1%A8%E6%A0%BC.png" width="60%" />
 +
<p style="font-size:16px;">The savings of fruit value is much greater than the cost of IOS, suggesting our IOS is really worthwhile to be implemented.</p>
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</div><br /><br />
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<div class="fund">
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<h3 style="margin-top:30px; margin-bottom:10px;">Reference:</h3><hr>
 +
 
 +
 
 +
<li style="list-style-type:decimal;"><a style="font-size:16px;" href="http://www.mdais.gov.tw/files/web_articles_files/mdares/2469/631.pdf">
 +
章加寶, 黃勝泉. "東方果實蠅寄生性天敵應用策略." 苗栗區農業專訊 44 (2008): 8-11.</a></li>
 +
 
 +
<li style="list-style-type:decimal;"><a  style="font-size:16px;"
 +
href="http://ir.tari.gov.tw:8080/bitstream/345210000/281/1/57_1_5.pdf">
 +
黃毓斌, et al. "東方果實蠅小面積區域防治模式研究 (二) 柑橘園之測試." 台灣農業研究 57.1 (2008): 63-73.</a></li>
 +
 
  
<p style="font-size:16px;">
 
(文字 – 家祥編寫中…
 
分析實際農地中配置方法 by 承勳model的結果, 成本, Z-bee收訊範圍…)
 
</p>
 
 
</div>
 
</div>
 +
 
</div>
 
</div>
  
<div class="prototypeprototypesp">
+
<div class="prototypeprototypesp"><!--smartphone-->
 +
 
 
<div class="fund">
 
<div class="fund">
<h1 style="margin-top:30px; margin-bottom:-10px; height:35px;">Integrated Orchard</h1>
+
<h1 style="margin-top:30px; margin-bottom:0px; height:65px; line-height: 36px;">Integrated Orchard Safeguard</h1></div>
<h1 style="margin-top:-10px; margin-bottom:10px; height:50px;">Safeguard</h1></div>
+
  
 
<div class="fund">
 
<div class="fund">
Line 247: Line 302:
 
<h2 style="margin-top:20px; margin-bottom:10px;">Overview</h2><hr />
 
<h2 style="margin-top:20px; margin-bottom:10px;">Overview</h2><hr />
  
<p style="font-size:16px;">Current method of applying entomogenous fungal pesticides is to suspend fungal spores into a solution and introduced through large-scaled spraying. However, with genetically engineered fungi, the contemporary biopesticide deployment method risk damaging the eco-system from the residual fungi. Our project is divided into two main focuses. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team try to avoid the risk of large-scaled pesticide spraying by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap.</p>
+
<p style="font-size:16px;">Current method of applying entomogenous fungal pesticides is large-scaled spraying fungal spore solution. However, deployment of genetically engineered fungal pesticides using contemporary methods puts the local eco-system at risk of disruption by the residual fungi. Our project is divided into two main focuses to neutralize these risks. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team attempt introduce an alternative to large-scaled spraying of genetically modified biopesticide by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap.</p>
  
<p style="font-size:16px;">In modern bait traps, the bait only attract B. dorsalis. However, it is female flies that is responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection of female flies via copulation. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with a smartphone app that receives data from the IR counter.</p>
+
<p style="font-size:16px;">In modern bait traps, the bait only attract <i>B. dorsalis</i>. However, it is female flies that is responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection of female flies via copulation. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with a smartphone app that receives data from the IR counter.</p>
  
 
<p style="font-size:16px;">We present the Integrated Orchard Safeguard, a informative defense system that links our <font color="#FF0000"><b>bait trap, IR counter, and smartphone app.</b></font></p>
 
<p style="font-size:16px;">We present the Integrated Orchard Safeguard, a informative defense system that links our <font color="#FF0000"><b>bait trap, IR counter, and smartphone app.</b></font></p>
Line 261: Line 316:
 
<h2 style="margin-top:30px; margin-bottom:10px;">Bait Trap</h2><hr />
 
<h2 style="margin-top:30px; margin-bottom:10px;">Bait Trap</h2><hr />
  
<p style="font-size:16px;">After the bait trap receives the population size of oriental fruit fly from IR counter, it will then <font color="#FF0000"><b>automatically regulate the frequency</b></font> of spraying the fungal solution and the length of the door opening time.</p>
+
<p style="font-size:16px;">After the bait trap receives the population size of oriental fruit fly from the IR counter, it will then <font color="#FF0000"><b>automatically regulate the frequency </b></font>of the spray of fungal spore solution and the opening duration of the door.</p>
  
 
<img src="https://static.igem.org/mediawiki/2016/9/91/T--NYMU-Taipei--photo-OFF-related-14628131_120300000688268755_160847704_n.jpg" width="100%" />
 
<img src="https://static.igem.org/mediawiki/2016/9/91/T--NYMU-Taipei--photo-OFF-related-14628131_120300000688268755_160847704_n.jpg" width="100%" />
 +
 +
</div>
 +
 +
<div class="fund">
  
 
<h3 style="margin-top:30px; margin-bottom:10px;">Design</h3><br />
 
<h3 style="margin-top:30px; margin-bottom:10px;">Design</h3><br />
 
 
<img src="https://static.igem.org/mediawiki/2016/a/a7/T-NYMU-Taipei-photo-trap_1.png" width="100%" />
 
<img src="https://static.igem.org/mediawiki/2016/a/a7/T-NYMU-Taipei-photo-trap_1.png" width="100%" />
  
<h4 style="margin-top:30px; margin-bottom:10px;">1. The First Layer – Microcontroller, Power</h4><br />
+
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">1. The First Layer – Microcontroller, Power</h4><br />
  
<div class="imageimage">
+
<img src="https://static.igem.org/mediawiki/2016/6/6f/T-NYMU-Taipei-photo-real_floor.png" width="90%" /><br />
<div style="position:relative; width:48%; margin-right:2%;">
+
<img src="https://static.igem.org/mediawiki/2016/6/6f/T-NYMU-Taipei-photo-real_floor.png" width="100%" /></div>
+
<div style="position:relative; width:48%; margin-left:2%;">
+
<img src="https://static.igem.org/mediawiki/2016/6/6f/T-NYMU-Taipei-photo-real_floor.png" width="100%" /></div>
+
</div>
+
  
<p style="font-size:16px;">晶片設計圖</p>
+
<img src="https://static.igem.org/mediawiki/2016/f/f3/T--NYMU-Taipei--photo-OFF-related-14725282_120300000683641886_996432644_o.png" width="90%" />
  
<h4 style="margin-top:30px; margin-bottom:10px;">2. The Second Layer – Motor</h4><br />
+
<p style="font-size:16px;">The Arduino UNO in our design has combined with Appsduino's product, AppsBee Shield and Appsduino Shield. (The web site of Appsduino: http://appsduino.com/)</p>
  
<img src="https://static.igem.org/mediawiki/2016/c/c7/T-NYMU-Taipei-photo-roof.png" width="48%" />
+
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">2. The Second Layer – Motor</h4><br />
  
<p style="font-size:16px;">We use ULN2003 motor to control the string and let the door go up or down.</p>
+
<img src="https://static.igem.org/mediawiki/2016/c/c7/T-NYMU-Taipei-photo-roof.png" width="90%" />
  
<h4 style="margin-top:30px; margin-bottom:10px;">3. Drawer – Entrance, Atomization Device</h4><br />
+
<p style="font-size:16px;">We use the string attached to a ULN2003 stepper motor driver to open and close the door.
 +
</p>
  
<img src="https://static.igem.org/mediawiki/2016/a/a9/T-NYMU-Taipei-photo-floor_1.png" width="48%" />
+
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">3. Drawer – Entrance, Atomization Device</h4><br />
  
<p style="font-size:16px;">Flying from bottom to up is one the behavior of oriental fruit fly. Thus, we set the <font color="#FF0000"><b>entrance</b></font> at the bottom of the trap make the oriental fruit fly not able to run out. The grower can pull out the drawer to supplement the <font color="#FF0000"><b>methyl eugenol(a pheromone precursor)</b></font> to maintain the attraction for oriental fruit fly. The <font color="#FF0000"><b>atomization device</b></font> in the drawer sprays fungal solution to infect the oriental fruit fly.</p>
+
<img src="https://static.igem.org/mediawiki/2016/a/a9/T-NYMU-Taipei-photo-floor_1.png" width="100%" />
 +
 
 +
<p style="font-size:16px;">Since flying up is one of the behaviors of <i>B. dorsalis</i>, we set the <font color="#FF0000"><b>entrance</b></font> at the bottom of the trap to hinder the escape of trapped flies. The grower can pull out the drawer to refill the <font color="#FF0000"><b>methyl eugenol(a pheromone precursor)</b></font> to maintain the trap's attraction to male flies. The <font color="#FF0000"><b>atomization device</b></font> in the drawer sprays fungal spore solution to infect the trapped male flies.</p>
  
 
</div>
 
</div>
Line 299: Line 355:
  
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">1. Specificity - Methyl Eugenol</h4>
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">1. Specificity - Methyl Eugenol</h4>
<p style="font-size:16px;">
+
<p style="font-size:16px;"><font color="#FF0000"><b>Methyl Eugenol</b></font> is the <font color="#FF0000"><b>pheromone precursor</b></font> of <i>B. dorsalis</i>. It only attracts male flies. The male flies will fly away once they have consumed enough Methyl Eugenol.</p>
<font color="#FF0000"><b>Methyl Eugenol</b></font> is the <font color="#FF0000"><b>pheromone precursor</b></font> of oriental fruit fly. It will only appeal to male oriental fruit fly. The male oriental fruit fly will stop and fly away once they consume enough Methyl Eugenol.
+
 
</p>
+
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">2. Target main Problem – Female <i>B. dorsalis</i></h4>
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">2. Target main Problem – Female Oriental Fruit Fly</h4>
+
<p style="font-size:16px;"><font color="#FF0000"><b>female <i>B. dorsalis</i></b></font> poses more threat than males. </p>
<p style="font-size:16px;">
+
 
<font color="#FF0000"><b>female B. dorsalis</b></font> poses more threat than male oriental fruit fly.  
+
</p>
+
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">3. Regulation – IR Counter, Trap, Phone App</h4>
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">3. Regulation – IR Counter, Trap, Phone App</h4>
<p style="font-size:16px;">
+
<p style="font-size:16px;"><font color="#FF0000"><b>Automatically regulation</b></font> of the spray frequency and door open duration depends on the data collected by the IR counter and phone APP.</p>
<font color="#FF0000"><b>Automatically regulation</b></font> of the frequency and door open duration depending on data from IR counter and phone APP.
+
 
</p>
+
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">4. Eco-Friendly – Recycle </h4>
 
<h4 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">4. Eco-Friendly – Recycle </h4>
<p style="font-size:16px;">
+
<p style="font-size:16px;">Replacing the indissoluble plastic material (distributed by the government) with <font color="#FF0000"><b>recyclable wood chips</b></font>, which can reduce environmental pollution.</p>
Replacing the indissoluble plastic material (distributed by the government) with <font color="#FF0000"><b>recyclable wood chips</b></font>. It can reduce environmental pollution.
+
</p>
+
  
 
</div>
 
</div>
  
<div class="fund">
+
<div class="fund" align="center">
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Mechanism</h3><br />
 +
<img src="https://static.igem.org/mediawiki/2016/3/3d/T-NYMU-Taipei-photo-pipeline.jpg" width="80%" />
 +
</div>
  
<h3 style="margin-top:30px; margin-bottom:10px;">Mechanism</h3><br>
+
<div class="fund" align="center">
<img src="https://static.igem.org/mediawiki/2016/3/3d/T-NYMU-Taipei-photo-pipeline.jpg" width="100%" />
+
<h3 style="margin-top:30px; margin-bottom:10px;">Functionality Display Video</h3><br />
 
+
<iframe width="100%" src="https://www.youtube.com/embed/-1yPsO4_5a4" frameborder="0" allowfullscreen ></iframe>
<h3 style="margin-top:30px; margin-bottom:10px; line-height: 24px;">Functionality Display Video</h3><br />
+
<iframe src="https://www.youtube.com/embed/-1yPsO4_5a4" frameborder="0" allowfullscreen width="100%"></iframe>
+
 
</div>
 
</div>
  
 
<div class="fund">
 
<div class="fund">
 
<h2 style="margin-top:30px; margin-bottom:10px;">IR Counter & APP</h2><hr />
 
<h2 style="margin-top:30px; margin-bottom:10px;">IR Counter & APP</h2><hr />
 +
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
IR counter records and provides <font color="#FF0000"><b>real-time information</b></font> of the orchard : <font color="#FF0000"><b>pest group size, meteorological data</b></font> including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.
+
IR counter records and provides <font color="#FF0000"><b>real-time information</b></font> of the orchard : <font color="#FF0000"><b>pest group size, meteorological data</b></font> including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.
 
</p>
 
</p>
  
 
<img src="https://static.igem.org/mediawiki/2016/6/69/T-NYMU-Taipei-photo-counter_in_field.jpg" width="100%" />
 
<img src="https://static.igem.org/mediawiki/2016/6/69/T-NYMU-Taipei-photo-counter_in_field.jpg" width="100%" />
  
 +
</div>
 +
 +
<div class="fund" align="center">
 
<h3 style="margin-top:30px; margin-bottom:10px; height:20px;">Design</h3><br />
 
<h3 style="margin-top:30px; margin-bottom:10px; height:20px;">Design</h3><br />
 +
<img src="https://static.igem.org/mediawiki/2016/f/fe/T-NYMU-Taipei-photo-14741853_120300000623455056_66387865_n.jpg" width="80%" />
 +
</div>
  
<img src="https://static.igem.org/mediawiki/2016/f/fe/T-NYMU-Taipei-photo-14741853_120300000623455056_66387865_n.jpg" width="100%" />
+
<div class="fund">
<p style="font-size:16px;">IR Counter + part文字</p>
+
<h3 align="center" style="margin-top:30px; margin-bottom:10px;>Counter Microcontroller</h3>
 +
<img src="https://static.igem.org/mediawiki/2016/9/9e/14615770_902531213210754_6845015680555279181_o.jpg" width="80%" style="margin-left:10%;" />
 +
</div>
  
<h3 style="margin-top:30px; margin-bottom:10px;">Functional Test</h3>
+
<div class="fund">
  
<img src="https://static.igem.org/mediawiki/2016/thumb/4/4d/T-NYMU-Taipei-photo-14647197_120300000625973835_1048154200_o.jpg/180px-T-NYMU-Taipei-photo-14647197_120300000625973835_1048154200_o.jpg" width="80%" />
+
<h2 style="margin-top:30px; margin-bottom:10px;">Functional Test</h2><hr>
  
<p style="font-size:16px;">To <font color="#FF0000"><b>improve the accuracy</b></font> of counter, we tried to find the proper tunnel diameter allows only <font color="#FF0000"><b>one-by-one passage of B.</b></font> dorsalis. We prepared different size of straws to connect two centrifuge tubes. One contained male B. dorsalis, and the other contained the bait, methyl eugenol.</p>
+
<h3 style="margin-top:30px; margin-bottom:10px;">"Diameter of the tunnel that allows passage to one <i>B. dorsalis</i>" & IR counter</h3>
  
 +
<img src="https://static.igem.org/mediawiki/2016/c/c9/T-NYMU-Taipei-photo-Tunnel_experiment.JPG" width="90%" />
 +
 +
<p style="font-size:16px;">To <font color="#FF0000"><b>improve the accuracy</b></font> of counter, we tried to find the proper tunnel diameter allows only <font color="#FF0000"><b>one-by-one passage of <i>B. dorsalis</i></b></font>. We prepared different size of straws to connect two centrifuge tubes. One contained male <i>B. dorsalis</i>, and the other contained the bait, methyl eugenol. </p>
  
 
</div>
 
</div>
Line 350: Line 413:
 
<div class="fund">
 
<div class="fund">
 
<h3 style="margin-top:30px; margin-bottom:10px;">Result</h3>
 
<h3 style="margin-top:30px; margin-bottom:10px;">Result</h3>
<p style="font-size:16px;">Results indicate that when the tunnel diameter is above <font color="#FF0000"><b>0.8 cm</b></font>, the flies can pass through.</p>
+
<p style="font-size:16px;">The results indicate that when the tunnel diameter is above <font color="#FF0000"><b>0.8 cm</b></font>, the flies can pass through.</p>
  
 
<div class="tablesatisfysp" style="overflow-x:auto;">
 
<div class="tablesatisfysp" style="overflow-x:auto;">
 
<table border="1">
 
<table border="1">
 
 <tr>
 
 <tr>
     <td style="width:100px;">Diameter(cm)</td>
+
     <td>Diameter(cm)</td>
     <td style="width:50px;">2.00</td>
+
     <td>2.00</td>
     <td style="width:50px;">1.75</td>
+
     <td>1.75</td>
     <td style="width:50px;">1.50</td>
+
     <td>1.50</td>
     <td style="width:50px;">1.00</td>
+
     <td>1.00</td>
     <td style="width:50px;">0.80</td>
+
     <td>0.80</td>
     <td style="width:50px;">0.75</td>
+
     <td>0.75</td>
     <td style="width:50px;">0.60</td>
+
     <td>0.60</td>
 
 </tr>
 
 </tr>
 
 <tr>
 
 <tr>
     <td style="width:100px;">outcome</td>
+
     <td>outcome</td>
     <td style="width:50px;">O</td>
+
     <td>O</td>
     <td style="width:50px;">O</td>
+
     <td>O</td>
     <td style="width:50px;">O</td>
+
     <td>O</td>
     <td style="width:50px;">O</td>
+
     <td>O</td>
     <td style="width:50px;">O</td>
+
     <td>O</td>
     <td style="width:50px;">Hardly</td>
+
     <td>Hardly</td>
     <td style="width:50px;">X</td>
+
     <td>X</td>
 
 </tr>
 
 </tr>
 
</table>
 
</table>
Line 380: Line 443:
  
 
<div class="fund">
 
<div class="fund">
<h2 style="margin-top:30px; margin-bottom:10px;">(尚未想好名字)</h2><hr>
+
 
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Twin Infection Rate experiments</h3>
  
 
<p style="font-size:16px;">
 
<p style="font-size:16px;">
(文字 – 家祥編寫中…
+
"Infecting <i>B. dorsalis</i> with non-designed <i>M. anisopliae</i>" and "infecting female <i>B. dorsalis</i> by copulation with infected male <i>B. dorsalis</i>" experiments link to each other; they not only confirm the fact that <i>M. anisopliae</i> successfully invaded and eventually caused the death of <i>B. dorsalis</i> also show the NEW way of bio-control through the interaction from the male to the FEMALE.
分析實際農地中配置方法 by 承勳model的結果, 成本, Z-bee收訊範圍…)
+
<br>
 +
The concentration that efficiently and sufficiently causing the death of <i>B. dorsalis</i> is <font color="#FF0000"><b>1.6 × 10<sup>6</sup></font></b> (conidia/ ml).
 
</p>
 
</p>
 +
<p style="font-size:16px;">
 +
The death rate of female <i>B. dorsalis</i> infected by <i>M. anisopliae</i> via copulation with infected males is <font color="#FF0000"><b>80%</b></font>.
 +
 +
<img src="https://static.igem.org/mediawiki/2016/c/c1/T-NYMU-Taipei-photo-Infection_experiment.JPG" width="100%" />
 +
<p style="font-size:16px;">The moment we change the day and night to the <i>B. dorsalis</i> during the infection rate experiment.</p>
 +
 +
<div class="tablesatisfysp" style="overflow-x:auto;">
 +
<table border="1">
 +
 <tr>
 +
     <td>Number</td>
 +
     <td>1</td>
 +
     <td>2</td>
 +
     <td>3</td>
 +
 </tr>
 +
 <tr>
 +
     <td>Death rate</td>
 +
     <td>100%</td>
 +
     <td>100%</td>
 +
     <td>40%</td>
 +
 </tr>
 +
</table>
 
</div>
 
</div>
 +
 +
 +
<h2 style="margin-top:30px; margin-bottom:10px;">Efficiency Model</h2><hr>
 +
 +
<p style="font-size:16px;">
 +
A population size model of <i>B. dorsalis</i> was constructed to simulate a comparison of <i>B. dorsalis</i> population size between an IOS-protected orchard and a normal orchard. The results show <font color="#FF0000"><b>a significant decrease of 35% in <i>B. dorsalis</i> population</b></font> in an IOS-protected orchard compared to one without IOS.
 +
<br>
 +
<a href="https://2016.igem.org/Team:NYMU-Taipei/Project-Model">Link to modeling</a>
 +
</p>
 +
</div>
 +
 +
<div class="fund">
 +
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Population size without IOS</h3><br />
 +
<video src="https://static.igem.org/mediawiki/2016/b/bc/T-NYMU-Taipei-model-movie.mp4" controls autoplay width="100%">
 +
</video><br>
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Population size with IOS</h3><br />
 +
<video src="https://static.igem.org/mediawiki/2016/d/d4/T-NYMU-Taipei-photo-model1mb.mp4" controls autoplay width="100%">
 +
</video><br>
 +
</div>
 +
 +
<div class="fund">
 +
 +
<h2 style="margin-top:30px; margin-bottom:10px;">Expenditure Analysis</h2><hr>
 +
 +
<p style="font-size:16px;">Based on our experimental deployment of counters and traps in an orchard one-hectare in size. The estimated total cost of IOS is listed below:</p>
 +
 +
<div class="tablesatisfysp" style="overflow-x:auto;">
 +
<table cellspacing="0" cellpadding="0" border="1">
 +
    <tbody>
 +
        <tr>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;"><strong> </strong></p>
 +
            </td>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;"><strong>amount</strong></p>
 +
            </td>
 +
            <td width="231" valign="top">
 +
                <p style="font-size:16px;"><strong>cost (USD)</strong></p>
 +
            </td>
 +
        </tr>
 +
        <tr>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;"><strong>trap</strong></p>
 +
            </td>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;">4</p>
 +
            </td>
 +
            <td width="231" valign="top">
 +
                <p style="font-size:16px;">60</p>
 +
            </td>
 +
        </tr>
 +
        <tr>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;"><strong>counter</strong></p>
 +
            </td>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;">3</p>
 +
            </td>
 +
            <td width="231" valign="top">
 +
                <p style="font-size:16px;">30</p>
 +
            </td>
 +
        </tr>
 +
        <tr>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;"><strong>methyl eugenol</strong></p>
 +
            </td>
 +
            <td width="230" valign="top">
 +
                <p style="font-size:16px;">100 mL</p>
 +
            </td>
 +
            <td width="231" valign="top">
 +
                <p style="font-size:16px;"> 50</p>
 +
            </td>
 +
        </tr>
 +
        <tr>
 +
            <td colspan="2" width="461" valign="top">
 +
                <p align="center" style="font-size:16px;"><strong>total cost</strong></p>
 +
            </td>
 +
            <td width="231" valign="top">
 +
                <p style="font-size:16px;">90</p>
 +
            </td>
 +
        </tr>
 +
    </tbody>
 +
</table>
 +
</div>
 +
 +
</div>
 +
 +
<div class="fund">
 +
 +
<p style="font-size:16px;">It is estimated that orchard without any <i>B. dorsalis</i> treatment may incur lost up to 30% of fruit(1). A few calculation was done based on the data from government, and it shows that the saving of fruit value due to our IOS is much greater than the cost of IOS, suggesting our IOS is really worthwhile to be implemented.</p>
 +
 +
<div align="center">
 +
<img src="https://static.igem.org/mediawiki/2016/d/d3/T-NYMU-Taipei-photo-protype_image005.png" width="100%" /></div>
 +
 +
<p style="font-size:16px;"><font color="#FF0000"><b>(cost of IOS only in low ratio compared to the total profit)</b></font></p><br />
 +
 +
<div align="center">
 +
<img src="https://static.igem.org/mediawiki/2016/0/00/T-NYMU-Taipei-photo-protype_image007.png" width="100%" /></div>
 +
 +
<p style="font-size:16px;"><font color="#FF0000"><b>(figure showing the great savings from IOS)</b></font></p><br />
 +
 +
<h3 style="margin-top:30px; margin-bottom:10px;">Reference:</h3><hr />
 +
 +
<li style="list-style-type:decimal;"><a style="font-size:16px;" href="http://www.mdais.gov.tw/files/web_articles_files/mdares/2469/631.pdf">
 +
章加寶, 黃勝泉. "東方果實蠅寄生性天敵應用策略." 苗栗區農業專訊 44 (2008): 8-11.</a></li>
 +
 +
<li style="list-style-type:decimal;"><a  style="font-size:16px;"
 +
href="http://ir.tari.gov.tw:8080/bitstream/345210000/281/1/57_1_5.pdf">
 +
黃毓斌, et al. "東方果實蠅小面積區域防治模式研究 (二) 柑橘園之測試." 台灣農業研究 57.1 (2008): 63-73.</a></li>
 +
 +
</div>
 +
 
</div>
 
</div>
  

Latest revision as of 00:58, 20 October 2016

Integrated Orchard Safeguard

Overview


Current method of applying entomogenous fungal pesticides is large-scaled spraying fungal spore solution. However, deployment of genetically engineered fungal pesticides using contemporary methods puts the local eco-system at risk of disruption by the residual fungi.

Our project is divided into two main focuses to neutralize these risks. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team attempt introduce an alternative to large-scaled spraying of genetically modified biopesticide by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap.

In modern bait traps, the bait only attract male B. dorsalis. However, it is the females that are responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection to spread to the females via copulation with infected males. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with our smartphone app that receives data from the IR counter.

We present the Integrated Orchard Safeguard, an information network system that connects our bait trap, IR counter and smartphone app together.

New Generation Bait Trap


After the bait trap receives the population size information of B. dorsalis from the IR counter, it will then automatically regulate the frequency of the spray of fungal spore solution and the opening duration of the door.

Design


1. The First Layer – Microcontroller, Power


The Arduino UNO main chip in our design was combined with two additional Appsduino chips, AppsBee Shield and Appsduino Shield. (The web site of Appsduino: http://appsduino.com/)

2. The Second Layer – Motor


We use the string attached to a ULN2003 stepper motor driver to open and close the door.

3. Drawer – Entrance, Atomization Device


Since flying up is one of the behaviors of B. dorsalis, we set the entrance at the bottom of the trap to hinder the escape of trapped flies. The grower can pull out the drawer to refill the methyl eugenol(a pheromone precursor) to maintain the trap's attraction to male flies. The atomization device in the drawer sprays fungal spore solution to infect the trapped male flies.


Features

1. Specificity - Methyl Eugenol

Methyl Eugenol is the pheromone precursor of B. dorsalis. It only attracts male flies. The male flies will fly away once they have consumed enough Methyl Eugenol.

2. Target main Problem – Female B. dorsalis

Female B. dorsalis poses more threat than males.

3. Regulation – IR Counter, Trap, Phone App

Automatic regulation of the spray frequency and door opening duration depending on the data collected by the IR counter and phone APP.

4. Eco-Friendly – Recycle

Replacing the indissoluble plastic material (distributed by the government) with recyclable wood planks, which can reduce environmental pollution.

Mechanism


Functionality Display Video


IR Counter & APP


IR counter records and provides real-time information of the orchard : pest group size and meteorological data including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.

Design


Functionality Display Video


Functional Test


"Diameter of the tunnel that allows passage to one B. dorsalis" & IR counter

To improve the accuracy of counter, we tried to find the proper tunnel diameter allows only one-by-one passage of B. dorsalis. We prepared different size of straws to connect two centrifuge tubes. One contained male B. dorsalis, and the other contained the bait, methyl eugenol.

Result

The results indicate that when the tunnel diameter is above 0.8 cm, the flies can pass through.

                                       
Diameter(cm)2.001.751.501.000.800.750.60
outcomeOOOOOHardlyX

Twin Infection Rate experiments

"Infecting B. dorsalis with wildtype M. anisopliae" and "infecting female B. dorsalis by copulation with infected male B. dorsalis" experiments link to each other. This not only confirm the fact that M. anisopliae can infect and eventually kill B. dorsalis, but also a NEW way of biological control through the use of males as infection vectors to infect the females.
The concentration that is the most effective in killing B. dorsalis is 1.6 × 106 (conidia/ ml).

The death rate of female B. dorsalis infected by M. anisopliae via copulation with infected males is 80%.

The moment we change the day and night to the B. dorsalis during the infection rate experiment.

                       
Number123
Death rate100%100%40%

Modeling Efficiency


A population size model of B. dorsalis was constructed to simulate a comparison of B. dorsalis population size between an IOS-protected orchard and a normal orchard. The results show a significant decrease of 35% in B. dorsalis population in an IOS-protected orchard compared to one without IOS.
Link to modeling

Population size without IOS



Population size with IOS


Expenditure Analysis


Based on our experimental deployment of counters and traps in an orchard one-hectare in size. The estimated total cost of IOS is listed below:


It is estimated that orchard without any B. dorsalis treatment may incur lost up to 30% of fruit[1]. A few calculation was done based on the data from government, and it shows that the implementation of IOS can reduce the agricultural loss by 25%.


The savings of fruit value is much greater than the cost of IOS, suggesting our IOS is really worthwhile to be implemented.



Integrated Orchard Safeguard

Overview


Current method of applying entomogenous fungal pesticides is large-scaled spraying fungal spore solution. However, deployment of genetically engineered fungal pesticides using contemporary methods puts the local eco-system at risk of disruption by the residual fungi. Our project is divided into two main focuses to neutralize these risks. While our team members in wet lab aim to design a killing switch circuit to decrease the environmental risk of genetically engineered fungus from within the organism. Our prototype team attempt introduce an alternative to large-scaled spraying of genetically modified biopesticide by designing and building an Integrated Orchard Safeguard system centered around our prototype bait trap.

In modern bait traps, the bait only attract B. dorsalis. However, it is female flies that is responsible for the species' high reproductiveness and destructiveness. This is why we designed the bait trap to attract, infect, and release male flies to allow M. anisopliae infection of female flies via copulation. The IR counter, another feature of our prototype, record and provide information including pest population size and meteorological data, such as temperature and humidity. Furthermore, farmers can monitor their orchards with a smartphone app that receives data from the IR counter.

We present the Integrated Orchard Safeguard, a informative defense system that links our bait trap, IR counter, and smartphone app.

Bait Trap


After the bait trap receives the population size of oriental fruit fly from the IR counter, it will then automatically regulate the frequency of the spray of fungal spore solution and the opening duration of the door.

Design


1. The First Layer – Microcontroller, Power



The Arduino UNO in our design has combined with Appsduino's product, AppsBee Shield and Appsduino Shield. (The web site of Appsduino: http://appsduino.com/)

2. The Second Layer – Motor


We use the string attached to a ULN2003 stepper motor driver to open and close the door.

3. Drawer – Entrance, Atomization Device


Since flying up is one of the behaviors of B. dorsalis, we set the entrance at the bottom of the trap to hinder the escape of trapped flies. The grower can pull out the drawer to refill the methyl eugenol(a pheromone precursor) to maintain the trap's attraction to male flies. The atomization device in the drawer sprays fungal spore solution to infect the trapped male flies.


Features

1. Specificity - Methyl Eugenol

Methyl Eugenol is the pheromone precursor of B. dorsalis. It only attracts male flies. The male flies will fly away once they have consumed enough Methyl Eugenol.

2. Target main Problem – Female B. dorsalis

female B. dorsalis poses more threat than males.

3. Regulation – IR Counter, Trap, Phone App

Automatically regulation of the spray frequency and door open duration depends on the data collected by the IR counter and phone APP.

4. Eco-Friendly – Recycle

Replacing the indissoluble plastic material (distributed by the government) with recyclable wood chips, which can reduce environmental pollution.

Mechanism


Functionality Display Video


IR Counter & APP


IR counter records and provides real-time information of the orchard : pest group size, meteorological data including temperature and humidity. With a smartphone app, the bait traps are able to inform the grower of these important information.

Design


Functional Test


"Diameter of the tunnel that allows passage to one B. dorsalis" & IR counter

To improve the accuracy of counter, we tried to find the proper tunnel diameter allows only one-by-one passage of B. dorsalis. We prepared different size of straws to connect two centrifuge tubes. One contained male B. dorsalis, and the other contained the bait, methyl eugenol.

Result

The results indicate that when the tunnel diameter is above 0.8 cm, the flies can pass through.

                                       
Diameter(cm)2.001.751.501.000.800.750.60
outcomeOOOOOHardlyX

Twin Infection Rate experiments

"Infecting B. dorsalis with non-designed M. anisopliae" and "infecting female B. dorsalis by copulation with infected male B. dorsalis" experiments link to each other; they not only confirm the fact that M. anisopliae successfully invaded and eventually caused the death of B. dorsalis also show the NEW way of bio-control through the interaction from the male to the FEMALE.
The concentration that efficiently and sufficiently causing the death of B. dorsalis is 1.6 × 106 (conidia/ ml).

The death rate of female B. dorsalis infected by M. anisopliae via copulation with infected males is 80%.

The moment we change the day and night to the B. dorsalis during the infection rate experiment.

                       
Number123
Death rate100%100%40%

Efficiency Model


A population size model of B. dorsalis was constructed to simulate a comparison of B. dorsalis population size between an IOS-protected orchard and a normal orchard. The results show a significant decrease of 35% in B. dorsalis population in an IOS-protected orchard compared to one without IOS.
Link to modeling

Population size without IOS



Population size with IOS



Expenditure Analysis


Based on our experimental deployment of counters and traps in an orchard one-hectare in size. The estimated total cost of IOS is listed below:

amount

cost (USD)

trap

4

60

counter

3

30

methyl eugenol

100 mL

50

total cost

90

It is estimated that orchard without any B. dorsalis treatment may incur lost up to 30% of fruit(1). A few calculation was done based on the data from government, and it shows that the saving of fruit value due to our IOS is much greater than the cost of IOS, suggesting our IOS is really worthwhile to be implemented.

(cost of IOS only in low ratio compared to the total profit)


(figure showing the great savings from IOS)


Reference:


  • 章加寶, 黃勝泉. "東方果實蠅寄生性天敵應用策略." 苗栗區農業專訊 44 (2008): 8-11.
  • 黃毓斌, et al. "東方果實蠅小面積區域防治模式研究 (二) 柑橘園之測試." 台灣農業研究 57.1 (2008): 63-73.