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| {{:Team:Tianjin/Templates/MaterialTheme|}} | | {{:Team:Tianjin/Templates/MaterialTheme|}} |
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− | {{:Team:Tianjin/Templates/AddCSS|:Team:Tianjin/Note/6803/camarts.css}} | + | {{:Team:Tianjin/Templates/AddCSS|:Team:Tianjin/Note/R-R/camarts.css}} |
| {{:Team:Tianjin/Templates/AddCSS|:Team:Tianjin/Experiment/css/font.css}} | | {{:Team:Tianjin/Templates/AddCSS|:Team:Tianjin/Experiment/css/font.css}} |
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| <html lang="en"> | | <html lang="en"> |
| + | <style> |
| + | #Notes{ |
| + | color: inherit; |
| + | background-color: rgba(255, 255, 255, 0.1); |
| + | } |
| + | </style> |
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| <head> | | <head> |
| <meta charset="utf-8" /> | | <meta charset="utf-8" /> |
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| <meta content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=0" name="viewport" /> | | <meta content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=0" name="viewport" /> |
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| + | |
| + | |
| + | <style> |
| + | #Notes{ |
| + | color: inherit; |
| + | background-color: rgba(255, 255, 255, 0.1); |
| + | } |
| + | </style> |
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| <!------------------------------------------- This part should be dismissed in WIKI u | | <!------------------------------------------- This part should be dismissed in WIKI u |
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| <div id="Topp"></div> | | <div id="Topp"></div> |
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| <div id="page" class="hfeed" > | | <div id="page" class="hfeed" > |
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| <div id="page-heading" class="relative"> | | <div id="page-heading" class="relative"> |
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− | <header id="main-header" role="banner">
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| + | <header id="main-header" role="banner"> |
| + | <style> |
| + | .note-content,.note-content2,.note-content3,.note-content4,.note-content5,.note-content6,.note-content7,.note-content8,.note-content9,.note-content10,.note-content li,.note-content2 li,.note-content3 li,.note-content4 li,.note-content5 li,.note-content6 li,.note-content7 li,.note-content8 li,.note-content9 li,.note-content10 li{ |
| + | font-family:Arial; |
| + | font-size:18px; |
| + | text-align:justify; |
| + | } |
| + | </style> |
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| </div> | | </div> |
| </header> | | </header> |
− |
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| <div id="main"> | | <div id="main"> |
| <div id="content" class="home blog single-author one-column content" role="main"> | | <div id="content" class="home blog single-author one-column content" role="main"> |
− |
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− | <div id="Week1"></div>
| + | <div id="Week1"></div> |
| <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> | | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| <header class="entry-header"> | | <header class="entry-header"> |
− | <div class="entry-title" align="center" >Notes</div> | + | <div class="entry-title" align="center" >Notes For Cyanobacteria</div> |
| </header><!-- .entry-header --> | | </header><!-- .entry-header --> |
− | <h1 class="entry-title">Week1(8/1/2016-8/7/2016)</h1>
| + | |
| + | |
| + | |
| + | <!------------------------------------week 1 start------------------------------------------------> |
| + | <div id="Week1"></div> |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <header class="entry-header"> |
| + | <h1 class="entry-title">Week1(7/31/2016-8/6/2016)</h1> |
| + | </header><!-- .entry-header --> |
| + | |
| <div class="entry-content"> | | <div class="entry-content"> |
| + | <div class="note-content2"> |
| | | |
| | | |
− | <p>
| |
− | <li>Cultivation: 30µL mother liquid of Synechococcus sp. PCC 7942 (wild type)were cultivated in 10 mL BG-11-media at 30°C and 140rpm.<br/></li>
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− | <li>The genome DNA of 7942 was extracted using a Genomic DNA Isolation Kit.</li>
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− | </p>
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− |
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− |
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− |
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− | <hr class="article">
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− | </article><!-- #post-4252 -->
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| + | <b><h1 style="font-size:108%"> Jul.31th</b></h1> |
| + | <div style="padding-left:32px;"><li>Cultivation: 30µL mother liquid of Synechococcus sp PCC 7942 (wild type)were cultivated in 10 mL BG-11-media at 30°C and 140rpm.</li> |
| | | |
| | | |
| + | <li>The genome DNA of 7942 was extracted using a Genomic DNA Isolation Kit.</li></div><br/> |
| | | |
− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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− | <header class="entry-header">
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− | <h1 class="entry-title">Week2(8/15/2016-8/21/2016)</h1>
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− | </header><!-- .entry-header -->
| |
| | | |
− | <div class="entry-content">
| + | </div> |
− | <p><li>Synechococcus sp PCC 7942 had no signals of life.</li><br />
| + | <div id="Week2"></div> |
| + | <a class="expand-btn2">Show More</a> |
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− | <img class="aligncenter" src="https://static.igem.org/mediawiki/2016/3/37/Igem--6803-week2.jpg" alt="IMG_2956" width="300px"> | + | |
− | </a>
| + | |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
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− | <hr class="article">
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| </article> | | </article> |
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| | | |
| + | <!------------------------------------week1 end------------------------------------------------> |
| + | |
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− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
| + | |
− | <h1 class="entry-title">Week3(8/29/2016-9/4/2016)</h1> | + | |
| + | |
| + | |
| + | |
| + | <!------------------------------------week2 start------------------------------------------------> |
| + | |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <h1 class="entry-title">Week2(8/14/2016-8/20/2016)</h1> |
| <div class="entry-content"> | | <div class="entry-content"> |
− | <p><li>pMV-G19</li>
| |
− | <li>pMV-G15</li>
| |
| | | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/6/6d/Igem-6803-week3-1.jpg" alt="IMG_2956" width="800" height="533" >
| |
− | </a>
| |
| | | |
− | <li>Colonies were used to inoculate overnight cultures.</li> | + | <div class="note-content4"> |
− | <li>Plasmids were isolated using a miniprep kit.</li>
| + | |
| | | |
− | <b>Amplification of <i>19</i> and <i>15</i> with Q5 High-Fidelity DNA Polymerase out of E.coli </b><br/>
| |
| | | |
| | | |
− | <div class="note-content">
| |
| | | |
| | | |
| | | |
− | <li><i>19</i> amplification at 65.0°C with 19.rev/fwd primes.</li> | + | <div style="padding-left:32px;"><li>Synechococcus sp PCC 7942 had no signals of life.</li></div><br/> |
− | PCR worked, positive control worked, no amplification of <i>19</i>.
| + | |
− | <li><i>15</i> amplification at 65.0°C with 15.rev/fwd primes.</li>
| + | |
− | PCR worked, positive control worked, no amplification of <i>15</i>.
| + | |
− | <li>A product length of 900 bp was expected. The gel shows that most plasmids seem to be correct.</li>
| + | |
− | <li>This result was confirmed by sequencing.</li>
| + | |
− | <li>The fragments of <i>19</i> and <i>15</i> were purified with PCR Purification Kit.</li>
| + | |
| | | |
− |
| + | |
− |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | <a href="https://static.igem.org/mediawiki/2016/3/37/Igem--6803-week2.jpg" data-lightbox="no" data-title="7942"> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/3/37/Igem--6803-week2.jpg" alt="Igem-6803-week2" width="300px"><br/><br/> |
| + | </a> |
| + | <br/> |
| | | |
| </div> | | </div> |
− | <a class="expand-btn">Show More</a>
| |
| | | |
| + | <div id="Week3"></div> |
| + | <a class="expand-btn4">Show More</a> |
| | | |
− | <b>Ligation of <i>15</i> with <i>19</i></b><br/>
| |
| | | |
− | <div class="note-content2">
| |
| | | |
| + | |
| + | |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
| + | |
| + | |
| + | </article> |
| + | |
| + | |
| + | <!------------------------------------week2 end------------------------------------------------> |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | <!------------------------------------week3 start------------------------------------------------> |
| + | |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <header class="entry-header"> |
| + | <h1 class="entry-title">Week3(8/28/2016-9/3/2016)</h1> |
| + | </header><!-- .entry-header --> |
| + | |
| + | <div class="entry-content"> |
| + | <div class="note-content4"> |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Aug.29th</b></h1> |
| + | <div style="padding-left:32px;"><li>pMV-G19 and pMV-G15 containing our target genes were received.</li><br/> |
| + | |
| + | <a href="https://static.igem.org/mediawiki/2016/6/6d/Igem-6803-week3-1.jpg" data-lightbox="no" data-title="pMV-G19 and pMV-G15"> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/6/6d/Igem-6803-week3-1.jpg" alt="Igem-6803-week3-1" width="300px" ><br/><br/> |
| + | </a> |
| + | <br/> |
| + | <li>Colonies were used to inoculate overnight cultures.</li> |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Aug.30th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids were isolated using a miniprep kit.</li> |
| + | <li>Amplification of <i>19</i> and <i>15</i> with Q5 High-Fidelity DNA Polymerase out of E.coli.</li> |
| + | <i>19</i> amplification at 65.0°C with 19.rev/fwd primes.<br/> |
| + | PCR worked, positive control worked, no amplification of <i>19</i>.<br/> |
| + | <i>15</i> amplification at 65.0°C with 15.rev/fwd primes.<br/> |
| + | PCR worked, positive control worked, no amplification of <i>15</i>.<br/> |
| + | <li>A product length of 900 bp was expected. The gel shows that most plasmids seem to be correct.</li> |
| + | This result was confirmed by sequencing.<br/> |
| + | <li>The fragments of <i>19</i> and <i>15</i> were purified with PCR Purification Kit.</li> |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Aug.31th</b></h1> |
| + | <div style="padding-left:32px;"><li>Ligation of <i>15</i> with <i>19</i>.</li> |
| <li>We add a single 3`-adenine overhang to each end of the fragment of <i>19</i> and then purified with DNA Purification Kit.</li> | | <li>We add a single 3`-adenine overhang to each end of the fragment of <i>19</i> and then purified with DNA Purification Kit.</li> |
| <li><i>19</i> was ligated into T vectors via TA clone and transformed into E.coli via heat shock.</li> | | <li><i>19</i> was ligated into T vectors via TA clone and transformed into E.coli via heat shock.</li> |
− | <li>A colony PCR was performed with five colonies.</li> | + | </div> |
− | Gel electrophoresis showed that 5 colonies were positive for insertion of <i>19</i>.</li>
| + | <br/> |
− | Two of these colonies containing <i>19</i> were used to inoculate overnight cultures.</li>
| + | |
| + | <b><h1 style="font-size:108%"> Sep.1th</b></h1> |
| + | <div style="padding-left:32px;"><li>A colony PCR was performed with five colonies.</li> |
| + | <li>Gel electrophoresis showed that 5 colonies were positive for insertion of <i>19</i>.</li> |
| + | <li>Two of these colonies containing <i>19</i> were used to inoculate overnight cultures.</li> |
| <li><i>15</i> gene fragment was phosphorylated.</li> | | <li><i>15</i> gene fragment was phosphorylated.</li> |
− | <li>Plasmids containing T vector with <i>19</i>(pT-19)were isolated using a miniprep kit.</li> | + | </div> |
| + | <br/> |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.2th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids containing T vector with <i>19</i>(pT-19)were isolated using a miniprep kit.</li> |
| <li>Mono-restriction digest of pT-19 with stu I. </li> | | <li>Mono-restriction digest of pT-19 with stu I. </li> |
| <li>The enzyme-digested product was dephosphorylation.</li> | | <li>The enzyme-digested product was dephosphorylation.</li> |
− | <li>Dephosphorylated plasmid and phosphorylated gene <i>15</i> were connected.</li> | + | <br/> |
− | Ligation product was transformed into E.coli via heat shock.</li>
| + | |
− | <li>A colony PCR was performed with twelve colonies.</li> | + | <a href="https://static.igem.org/mediawiki/2016/a/aa/Igem-6803-week3.png" data-lightbox="no" data-title=" "> |
− | Gel electrophoresis showed that 2 colonies were positive for connecting the plasmid and gene fragment.</li>
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/a/aa/Igem-6803-week3.png" alt="Igem-6803-week3-2" width="800" height="533"><br/> |
− | These two colonies were used to inoculate overnight cultures.</li>
| + | |
− | <li>Plasmids with correct sequence of <i>19-15</i> were isolated using a miniprep kit.</li>
| + | |
− | <li>Mono-restriction digest of pT-19-15 with Nru I.</li>
| + | |
− | <li>The enzyme-digested product was dephosphorylation.</li>
| + | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/a/aa/Igem-6803-week3.png" alt="IMG_2956" width="800" height="533" | + | |
| </a> | | </a> |
− |
| + | <br/> |
− |
| + | |
| + | <li>Dephosphorylated plasmid and phosphorylated gene <i>15</i> were connected.</li> |
| + | <li>Ligation product was transformed into E.coli via heat shock.</li> |
| </div> | | </div> |
− | <a class="expand-btn2">Show More</a>
| + | <br/> |
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| + | <b><h1 style="font-size:108%"> Sep.3th</b></h1> |
| + | <div style="padding-left:32px;"><li>A colony PCR was performed with twelve colonies.</li> |
| + | <li>Gel electrophoresis showed that 2 colonies were positive for connecting the plasmid and gene fragment.</li> |
| + | <li>These two colonies were used to inoculate overnight cultures.</li> |
| + | </div> |
| + | <br/> |
| | | |
| | | |
| + | |
| + | </div> |
| + | <div id="Week4"></div> |
| + | <a class="expand-btn4">Show More</a> |
| + | |
| + | |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
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− | <hr class="article">
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| </article> | | </article> |
| | | |
| + | <!------------------------------------week3 end------------------------------------------------> |
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− |
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− |
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− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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− | <h1 class="entry-title">Week4(9/5/2016-9/11/2016)</h1>
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− | <div class="entry-content">
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− | <p><li>Colonies containing gene <i>13</i> were used to inoculate overnight cultures.</li>
| |
− | <li>Plasmids were isolated using a miniprep kit.</li>
| |
− | <b>Amplification of <i>13</i> with Q5 High-Fidelity DNA Polymerase out of E.coli </b><br/>
| |
| | | |
| + | <!------------------------------------week4 start------------------------------------------------> |
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− | <div class="note-content3"> | + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <header class="entry-header"> |
| + | <h1 class="entry-title">Week4(9/4/2016-9/10/2016)</h1> |
| + | </header><!-- .entry-header --> |
| | | |
| + | <div class="entry-content"> |
| + | <div class="note-content4"> |
| + | |
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− | <li><i>13</i> amplification at 65.0°C with 13.rev/fwd primes</li>
| |
− | PCR worked, positive control worked, no amplification of <i>13</i></li>
| |
− | <li>The fragments of <i>13</i> were purified with PCR Purification Kit.</li>
| |
− | <li><i>13</i> gene fragment was phosphorylated.</li>
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− |
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− |
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− | </div>
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− | <a class="expand-btn3">Show More</a>
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| + | <b><h1 style="font-size:108%"> Sep.4th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids with correct sequence of <i>19-15</i> were isolated using a miniprep kit.<li> |
| + | <li>Mono-restriction digest of pT-19-15 with Nru I.</li> |
| + | <li>The enzyme-digested product was dephosphorylation.</li> |
| + | </div> |
| + | <br/> |
| | | |
− | <b>Insertion of Ni promoter and ligation of <i>13-19-15</i></b><br/> | + | <b><h1 style="font-size:108%"> Sep.6th</b></h1> |
| + | <div style="padding-left:32px;"><li>Colonies containing gene <i>13</i> were used to inoculate overnight cultures. |
| + | </li> |
| + | </div> |
| + | <br/> |
| | | |
− | <div class="note-content4"> | + | <b><h1 style="font-size:108%"> Sep.7th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids were isolated using a miniprep kit.</li> |
| + | <li>Amplification of <i>13</i> with Q5 High-Fidelity DNA Polymerase out of E.coli </li> |
| + | <li><i>13</i> amplification at 65.0°C with 13.rev/fwd primes</li> |
| + | PCR worked, positive control worked, no amplification of <i>13</i><br/> |
| + | <li>The fragments of <i>13</i> were purified with PCR Purification Kit.</li> |
| + | </div> |
| + | <br/> |
| | | |
| + | <b><h1 style="font-size:108%"> Sep.8th</b></h1> |
| + | <div style="padding-left:32px;"><li><i>13</i> gene fragment was phosphorylated.</li> |
| + | </div> |
| + | <br/> |
| | | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.9th</b></h1> |
| + | <div style="padding-left:32px;"><li>Insertion of Ni promoter and ligation of <i>13-19-15</i></li> |
| <li>Ni inducible promoter was ligated into pCPC-3301 vector.</li> | | <li>Ni inducible promoter was ligated into pCPC-3301 vector.</li> |
| <li>Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li> | | <li>Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li> |
| <li>Single colonies were obtained by plating.</li> | | <li>Single colonies were obtained by plating.</li> |
− | <li>A colony PCR of Ni inducible promoter(pCPC-3301-Ni) was performed with 12 colonies.</li>
| + | </div> |
− | Two of the successful ones were used to inoculate overnight cultures.</li>
| + | <br/> |
− | <li>A colony PCR of pT-13-19-15 was performed with 7 colonies.</li>
| + | |
− | Two of the successful ones were used to inoculate overnight cultures.</li>
| + | |
− | <li>Two kinds of plasmids were isolated using a miniprep kit.</li>
| + | |
| | | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/8/81/Igem-6803-week4.png" alt="IMG_2956" width="800" height="533"> | + | <b><h1 style="font-size:108%"> Sep.10th</b></h1> |
| + | <div style="padding-left:32px;"> |
| + | <li>A colony PCR of Ni inducible promoter(pCPC-3301-Ni) was performed with 12 colonies.<li> |
| + | Two of the successful ones were used to inoculate overnight cultures.<br/> |
| + | <li>A colony PCR of pT-13-19-15 was performed with 7 colonies.<li> |
| + | Two of the successful ones were used to inoculate overnight cultures.<br/> |
| + | <br/> |
| + | |
| + | <a href="https://static.igem.org/mediawiki/2016/8/81/Igem-6803-week4.png" data-lightbox="no" data-title=" "> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/8/81/Igem-6803-week4.png" alt="Igem-6803-week4" width="800" height="533"> <br/> |
| </a> | | </a> |
− |
| + | <br/> |
− |
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| </div> | | </div> |
− | <a class="expand-btn4">Show More</a>
| + | <br/> |
| | | |
| + | |
| + | </div> |
| + | <div id="Week5"></div> |
| + | <a class="expand-btn4">Show More</a> |
| + | |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
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− | <hr class="article"> | + | |
| </article> | | </article> |
| | | |
| + | <!------------------------------------week4 end------------------------------------------------> |
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− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> | + | |
− | <h1 class="entry-title">Week5(9/12/2016-9/18/2016)</h1> | + | <!------------------------------------week5 start------------------------------------------------> |
| + | |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <header class="entry-header"> |
| + | <h1 class="entry-title">Week5(9/11/2016-9/17/2016)</h1> |
| + | </header><!-- .entry-header --> |
| + | |
| <div class="entry-content"> | | <div class="entry-content"> |
− | <p>
| + | <div class="note-content4"> |
| + | |
| + | |
| + | |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.11th</b></h1> |
| + | <div style="padding-left:32px;"><li>Two kinds of plasmids were isolated using a miniprep kit. |
| + | </li> |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.14th</b></h1> |
| + | <div style="padding-left:32px;"><li>The sequencing results for both of them were error.</li> |
| + | </div> |
| + | <br/> |
| | | |
− | <li>Plasmids pT-13-19-15 were handed in for sequencing, which confirmed its correctness.</li> | + | <b><h1 style="font-size:108%"> Sep.15th</b></h1> |
− | <b>The sequencing results for both of them were error.</b>
| + | <div style="padding-left:32px;"><li>Colonies containing Ni inducible promoter were used to inoculate overnight cultures.</li> |
− | <li>Colonies containing Ni inducible promoter were used to inoculate overnight cultures.</li> | + | |
| <li>PCR was performed to check if the gene fragments were ligated correctly.</li> | | <li>PCR was performed to check if the gene fragments were ligated correctly.</li> |
− | 13_ fwd and 15_rev on pT-13-19-15<br/>
| + | 13_ fwd and 15_rev on pT-13-19-15<br/> |
− | Gel electrophoresis showed that it failed.<br/>
| + | <li>Gel electrophoresis showed that it failed.</li> |
− | <li>Plasmids pCPC-3031-Ni were isolated using a miniprep kit.</li> | + | </div> |
| + | <br/> |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.16th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids pCPC-3031-Ni were isolated using a miniprep kit.</li> |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.17th</b></h1> |
| + | <div style="padding-left:32px;"> |
| <li>Several PCRs were performed to check if the gene fragments were ligated correctly.</li> | | <li>Several PCRs were performed to check if the gene fragments were ligated correctly.</li> |
− | 1.13_fwd and 13_rev on pT-13-19-15<br/>
| + | 13_fwd and 13_rev on pT-13-19-15<br/> |
− | 2.19_fwd and 19_rev on pT-13-19-15<br/>
| + | 19_fwd and 19_rev on pT-13-19-15<br/> |
− | 3.15_fwd and 15_rev on pT-13-19-15<br/>
| + | 15_fwd and 15_rev on pT-13-19-15<br/> |
− | 4.13_fwd and 19_rev on pT-13-19-15<br/>
| + | 13_fwd and 19_rev on pT-13-19-15<br/> |
− | 5.19_fwd and 15_rev on pT-13-19-15<br/>
| + | 19_fwd and 15_rev on pT-13-19-15<br/> |
− | 6.13_ wd and 15_rev on pT-13-19-15<br/>
| + | 13_ wd and 15_rev on pT-13-19-15<br/> |
− | <b>The fourth and sixth ones were not successful.</b><br/>
| + | <b>The fourth and sixth ones were not successful.</b><br/> |
− | <li><b>Repetition:</b> Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li>
| + | <br/> |
− | <li><b>Repetition:</b> Several PCRs were performed to check if the gene fragments were ligated correctly.</li>
| + | |
− | 1.13_fwd and 13_rev on pT-13-19-15<br/>
| + | |
− | 2.13_fwd and 19_rev on pT-13-19-15<br/>
| + | |
− | <b>The second one was failed.</b>
| + | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/4/40/Igem-6803-week5.png" alt="IMG_2956" width="800" height="533" >
| + | |
− | </a>
| + | |
| | | |
| + | <a href="https://static.igem.org/mediawiki/2016/4/40/Igem-6803-week5.png" data-lightbox="no" data-title=" "> |
| + | <img align="center"src="https://static.igem.org/mediawiki/2016/4/40/Igem-6803-week5.png" alt="Igem-6803-week5" width="800" height="533" ><br/> |
| + | </a> |
| + | <br/> |
| + | <li><b>Repetition:</b> Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li> |
| + | </div> |
| <br/> | | <br/> |
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| + | </div> |
| + | <div id="Week6"></div> |
| + | <a class="expand-btn4">Show More</a> |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
| | | |
− | <hr class="article"> | + | |
| </article> | | </article> |
| | | |
| + | <!------------------------------------week5 end------------------------------------------------> |
| | | |
| | | |
| | | |
| + | <!------------------------------------week6 start------------------------------------------------> |
| + | |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| + | <header class="entry-header"> |
| + | <h1 class="entry-title">Week6(9/18/2016-9/24/2016)</h1> |
| + | </header><!-- .entry-header --> |
| | | |
| + | <div class="entry-content"> |
| | | |
| + | <div class="note-content4"> |
| | | |
| | | |
| | | |
| | | |
− | <!-- #post-4252 -->
| |
− |
| |
− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
| |
− | <header class="entry-header">
| |
− | <h1 class="entry-title">Week6(9/19/2016-9/25/2016)</h1>
| |
− | </header><!-- .entry-header -->
| |
| | | |
− | <div class="entry-content">
| + | <b><h1 style="font-size:108%"> Sep.18th</b></h1> |
− | <p>
| + | <div style="padding-left:32px;"><b>Repetition:</b> Several PCRs were performed to check if the gene fragments were ligated correctly.<br/> |
− | <li>Medium preparation :BG-11.</li> | + | 13_fwd and 13_rev on pT-13-19-15<br/> |
| + | 13_fwd and 19_rev on pT-13-19-15<br/> |
| + | <b>The second one was failed.</b><br/> |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.21th</b></h1> |
| + | <div style="padding-left:32px;"><li>Medium preparation :BG-11.</li> |
| <li>19_ fwd and 15_rev were used to amplify <i>19-15</i>.</li> | | <li>19_ fwd and 15_rev were used to amplify <i>19-15</i>.</li> |
− | Gel electrophoresis showed that amplification of fragments was successfull.</li> | + | |
| + | </div> |
| + | <br/> |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.22th</b></h1> |
| + | <div style="padding-left:32px;"> |
| + | <li>Gel electrophoresis showed that amplification of fragments was successfull.</li> |
| <li>Ligated <i>13</i> and <i>19-15</i> via overlap PCR.</li> | | <li>Ligated <i>13</i> and <i>19-15</i> via overlap PCR.</li> |
− | This PCR worked well and the products were extracted from the gel using a Agarose Gel DNA Extration Kit.</li> | + | <li>This PCR worked well and the products were extracted from the gel using a Agarose Gel DNA Extration Kit.</li> |
| <li>Restriction digest on pCPC-3031-Ni with Sac I.</li> | | <li>Restriction digest on pCPC-3031-Ni with Sac I.</li> |
− | | + | <br/> |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/8/89/Igem-6803-week6-2.jpg" alt="IMG_2956" width="800" height="533" | + | <a href="https://static.igem.org/mediawiki/2016/8/89/Igem-6803-week6-2.jpg" data-lightbox="no" data-title=" "> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/8/89/Igem-6803-week6-2.jpg" alt="Igem-6803-week6-1" width="300px"> |
| + | </a> |
| | | |
| <li>The fragment <i>13-19-15</i> was ligated onto T vector and transformed into E.coli via heat shock.</li> | | <li>The fragment <i>13-19-15</i> was ligated onto T vector and transformed into E.coli via heat shock.</li> |
| | | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/0/06/Igem-6803-week6.jpg" alt="IMG_2956" width="800" height="533" | + | <a href="https://static.igem.org/mediawiki/2016/0/06/Igem-6803-week6.jpg" data-lightbox="no" data-title=" "> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/0/06/Igem-6803-week6.jpg" alt="Igem-6803-week6-2" width="300px" > |
| + | </a> |
| + | <br/> |
| + | </div> |
| + | <br/> |
| | | |
− | <li>A colony PCR of pT-13-19-15 was performed with 12 colonies.</li> | + | <b><h1 style="font-size:108%"> Sep.23th</b></h1> |
− | Two of these colonies containing pT-13-19-15 were used to inoculate overnight cultures.</li> | + | <div style="padding-left:32px;"><li>A colony PCR of pT-13-19-15 was performed with 12 colonies.</li> |
| + | <li>Two of these colonies containing pT-13-19-15 were used to inoculate overnight cultures.</li> |
| <li><i>13-19-15</i> gene fragment was phosphorylated.</li> | | <li><i>13-19-15</i> gene fragment was phosphorylated.</li> |
| <li>Phosphorylated <i>13-19-15</i> was ligated into pCPC-3031-Ni and transformed into E.coli via heat shock.</li> | | <li>Phosphorylated <i>13-19-15</i> was ligated into pCPC-3031-Ni and transformed into E.coli via heat shock.</li> |
| + | </div> |
| + | <br/> |
| | | |
− | <li>Plasmids pT-13-19-15 were isolated using a miniprep kit.</li>
| |
− | <li>A colony PCR of pCPC-3031-Ni-13-19-15 was performed with 12 colonies.</li>
| |
− | Three colonies were proved to be true. And two of them were used to inoculate overnight cultures.</li>
| |
| | | |
| + | <b><h1 style="font-size:108%"> Sep.24th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids pT-13-19-15 were isolated using a miniprep kit.</li> |
| + | </div> |
| + | <br/> |
| | | |
| + | </div> |
| + | <div id="Week7"></div> |
| + | <a class="expand-btn4">Show More</a> |
| | | |
− | <img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/2016/2/2d/Igem-6803-week6-3.png" alt="IMG_2956" width="800" height="533" >
| |
− |
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− |
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− | <br />
| |
| | | |
| + | </div><!-- .entry-content --> |
| | | |
| + | |
| | | |
− | <hr class="article"> | + | |
| </article> | | </article> |
| | | |
| + | <!------------------------------------week6 end------------------------------------------------> |
| | | |
| | | |
| | | |
− | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> | + | <!------------------------------------week7 start------------------------------------------------> |
| + | |
| + | <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173"> |
| <header class="entry-header"> | | <header class="entry-header"> |
− | <h1 class="entry-title">Week7(9/26/2016-10/2/2016)</h1> | + | <h1 class="entry-title">Week7(9/25/2016-10/1/2016)</h1> |
| </header><!-- .entry-header --> | | </header><!-- .entry-header --> |
| | | |
| <div class="entry-content"> | | <div class="entry-content"> |
− | <p>
| + | <div class="note-content4"> |
− | <li>Plasmids pT-13-19-15 were handed in for sequencing, which confirmed its correctness.</li> | + | |
| + | |
| + | |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.25th</b></h1> |
| + | <div style="padding-left:32px;"><li>A colony PCR of pCPC-3031-Ni-13-19-15 was performed with 12 colonies.</li> |
| + | <li>Three colonies were proved to be true. And two of them were used to inoculate overnight cultures.</li> |
| + | <br/> |
| + | <a href="https://static.igem.org/mediawiki/2016/2/2d/Igem-6803-week6-3.png" data-lightbox="no" data-title=" "> |
| + | <img align="center" src="https://static.igem.org/mediawiki/2016/2/2d/Igem-6803-week6-3.png" alt="Igem-6803-week6-3" width="800" height="533" ><br/> |
| + | </a> |
| + | <br/> |
| + | |
| + | </div> |
| + | <br/> |
| + | |
| + | |
| + | |
| + | <b><h1 style="font-size:108%"> Sep.26th</b></h1> |
| + | <div style="padding-left:32px;"><li>Plasmids pT-13-19-15 were handed in for sequencing, which confirmed its correctness.</li> |
| <b>The sequencing results for them were correct.</b> | | <b>The sequencing results for them were correct.</b> |
| + | <br/> |
| + | </div> |
| + | </br> |
| | | |
− | <br />
| |
| | | |
| | | |
− | <hr class="article">
| + | <b><h1 style="font-size:108%"> Sep.28th</b></h1> |
− | </article>
| + | <div style="padding-left:32px;"><li>We transformed the expression vector, pCPC-3031-Ni-13-19-15, into <i>Synechocystis 6803 </i>via electroporation.</li> |
− | <!-- #post-4252 --> | + | <br/> |
− |
| + | <b>The story of 6803 is not over. Other team members will show the completed process during the presentation. </br> |
| + | I will cherish the time spending with you for my whole life. ———by Jiawei Chen and Liangyu Qian</b> |
| + | </div> |
| + | |
| + | |
| + | |
| + | </div> |
| + | <a class="expand-btn4">Show More</a> |
| + | |
| + | </div><!-- .entry-content --> |
| + | |
| + | |
| | | |
| + | </article> |
| + | |
| + | <!------------------------------------week7 end------------------------------------------------> |
| | | |
| | | |
| | | |
− | <!-- #post-4176 -->
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