Difference between revisions of "Template:UPMC-Paris/Test"

 
(42 intermediate revisions by the same user not shown)
Line 372: Line 372:
  
  
<div class="menu_wrapper" >
+
<div>
  
  
Line 381: Line 381:
 
<ul id="accordion" class="accordion">
 
<ul id="accordion" class="accordion">
  
<li class="menu_item"> <a href="https://2016.igem.org/Team:UPMC-Paris">HOME </a> </li>
 
  
 +
<li class="menu_item"> <div class="icon plus"></div> Competent Cells
 +
<ul class="submenu">
 +
<li>
 +
<a href="">
 +
<div>
 +
<h>Preparation of Bacillus subtilis competent cells</h>
  
<li class="menu_item"> <div class="icon plus"></div> TEAM
+
<ol><li>Streak out the strain to be made competent on an LB agar plate as a large patch and incubate overnight at 30°C</li>
<ul class="submenu">
+
                              <div> <li>  
+
<p class="p2"> Team wawawawawawa  </p>
+
                                <img src="aaa" width="500px"/></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Collaborations">★  Collaborations </a> </li>
+
</div>
+
                    </ul>
+
                </li>
+
  
<li class="menu_item"> <div class="icon plus"></div> PROJECT 
+
<li>The following morning scrape the cell growth off the plate and use to inoculate fresh, pre-warmed, SpC medium (20 ml) to give an OD600 reading of about 0.5. </li>
<ul class="submenu">
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Description"> ★  Description </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Design"> ★ Design </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Experiments"> Experiments </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Proof"> ★ Proof of Concept </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Demonstrate"> ★ Demonstrate </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Results"> Results </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Notebook"> Notebook </a></li>
+
                    </ul>
+
                </li>
+
  
<li class="menu_item"> <div class="icon plus"></div> PARTS 
+
<li>Incubate the culture at 37°C with vigorous aeration and take periodic OD readings (OD600) to assess cell growth.</li>
<ul class="submenu">
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Parts">Parts </a></li>
+
<li>When the rate of cell growth is seen to depart from exponential (i.e. no significant change in cell density over 20-30 min) inoculate 200 ml of pre-warmed, SpII medium with 2 ml of stationary-phase culture and continue incubation at 37°C with slower aeration </li>
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Basic_Part"> ★ Basic Parts </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Composite_Part"> ★ Composite Parts </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Part_Collection"> ★ Part Collection </a></li>
+
                    </ul>
+
                </li>
+
  
 +
<li>After 90 min incubation, pellet the cells by centrifugation (8,000 g, 5min) at room temperature.</li>
  
<li class="menu_item"> <a href="https://2016.igem.org/Team:UPMC-Paris/Safety"> SAFETY </a> </li>
+
<li>Carefully decant the supernatant into a sterile container and save.</li>
  
 +
<li>Gently resuspended the cell pellet in 18 ml of the saved supernatant and add 2 ml of sterile glycerol; mix gently </li>
  
<li class="menu_item"> <a href="https://2016.igem.org/Team:UPMC-Paris/Attributions">★  ATTRIBUTIONS </a></li>
+
<li>Aliquot the competent cell (0.5 ml) in sterile tubes, freeze rapidly in liquid nitrogen or a dry-iced/ethanol bath or ice/isopropanol bath and store -70.</li></ol>
  
 +
</div></a></li></ul></li>
  
<li class="menu_item"> <div class="icon plus"></div> HUMAN PRACTICES
 
<ul class="submenu">
 
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Human_Practices"> Human Practices </a></li>
 
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/HP/Silver">★ Silver </a></li>
 
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/HP/Gold">★ Gold </a></li>
 
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Integrated_Practices"> ★ Integrated Practices </a></li>
 
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Engagement">★ Engagement </a></li>
 
                    </ul>
 
                </li>
 
  
 +
<li class="menu_item"> <div class="icon plus"></div> Transformation
 +
<ul class="submenu">
 +
<li>
 +
<a href="">
 +
<div>
 +
<h>Cells Preparation :</h>
  
<li class="menu_item"> <div class="icon plus"></div> AWARDS
+
<ol><li>Thaw competent cells rapidly by immersing frozen tubes in a 37°C water bath</li>
<ul class="submenu">
+
<li><a href="https://2016.igem.org/Team:UPMC-Paris/Entrepreneurship"> ★ Entrepreneurship </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Hardware"> ★ Hardware </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Software">★ Software </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Measurement">★  Measurement </a></li>
+
<li> <a href="https://2016.igem.org/Team:UPMC-Paris/Model">★ Model </a></li>
+
  
                    </ul>
+
<li>Immediately, add one volume of SpII + EGTA to the Thawed cells; mix gently </li>
                </li>
+
 
</ul>
+
<li>In a sterile test tube add competent cell (0.2~0.5 ml) to the DNA solution (<0.1 ml) and incubate in a roller drum at 37.</li>
 +
 
 +
<li>Dilute the transformed cells as appropriate in T base containing 0.5% glucose and plate immediately onto selective media. </li></ol>
 +
 
 +
<p align="center"><img src="https://static.igem.org/mediawiki/igem.org/d/d3/Transfo_pic_1.png" width="400px"/></p>
 +
</div></a>
 +
<a href=""><div>
 +
<h>Digestion :</h>
 +
<ol><li>Select restriction enzymes to digest your plasmid. Determine an appropriate reaction buffer by reading the instructions for your enzyme. </li>
 +
<p>In a 1.5mL tube combine the following:</p>
 +
<ul><li>DNA </li>
 +
<li>Restriction Enzyme(s)</li>  
 +
<li>Buffer </li>
 +
<li>dH2O up to total volume</li> </ul>
 +
<p>Mix gently by pipetting. </p>
 +
 
 +
<li>Incubate tube at appropriate temperature (usually 37°C) for 1 hour. </li>
 +
 
 +
<li>Always follow the manufacturer’s instructions. </li>
 +
 
 +
<li>To visualize the results of your digest, conduct gel electrophoresis</li></ol>
 +
</div></a>
 +
<a href=""><div>
 +
<h>Vector Preparation :</h>
 +
<p>Combine the following in a PCR or Eppendorf tube:</p>
 +
<ul><li>25ng Vector DNA</li>
 +
<li>75ng Insert DNA</li>
 +
<li>Ligase Buffer (1μL/10μL reaction for 10X buffer, and 2μL/10μL reaction for 5X buffer)</li>
 +
<li>0.5-1μL T4 DNA Ligase</li>
 +
<li>H20 to a total of 10μL</li></ul>
 +
<p>Incubate at room temperature for 2hr, or at 16°C overnight (following the manufacturer’s instructions).</p>
 +
 
 +
</div></a></li></ul></li>
 +
 
 +
 
 +
 
 +
<li class="menu_item"> <div class="icon plus"></div> Deletion
 +
<ul class="submenu">
 +
<li>
 +
<a href="">
 +
<div>
 +
<p>Deletion Step 1 :</p>
 +
<img src="aaa" width="500px"/>
 +
<p>Deletion Step 2 :</p>
 +
<img src="aaa" width="500px"/>
 +
<p>Deletion Step 3 :</p>
 +
<img src="aaa" width="500px"/></div></a></li></ul></li>
 +
 
 +
 
 +
<li class="menu_item"> <div class="icon plus"></div> Other
 +
<ul class="submenu">
 +
<li>
 +
<a href="">
 +
<div>
 +
<p>Whatever Step 1 :</p>
 +
<img src="aaa" width="50px"/>
 +
<p>Whatever Step 2 :</p>
 +
<img src="aaa" width="50px"/></div></a>
 +
<a href="">
 +
<div>
 +
<p>Un autre truc Step 1 :</p>
 +
<img src="aaa" width="50px"/>
 +
<p>Un autre truc Step 2 :</p>
 +
<img src="aaa" width="50px"/></div></a></li></ul></li>
 +
 
 +
 
 +
</ul>
  
 
</div>
 
</div>

Latest revision as of 15:07, 29 July 2016

MENU ▤