Line 147: | Line 147: | ||
<p><b>1. TAS2R3 RS765007</b></p> | <p><b>1. TAS2R3 RS765007</b></p> | ||
− | <p> | + | <p>CGACAGACTAAATTGGGCAGAGACAAGAGACAGGTACAGTGAAGCAACAGGTAGAGGAGTAGATTAACGAG<br> |
+ | AAAAATATCACATCAGTGAGGAGATTCTA[T/G]GTATCAACAGAAAGAACAAAGATCAGGGCTGCCTAATTGC<br> | ||
+ | TGACATGATGGGACTCACCGAGGGGGTGTTCCTGATTCTGTCTGGCACTCAGTTCACACT</p> | ||
<p><b>2. TAS2R3 RS765007</b></p> | <p><b>2. TAS2R3 RS765007</b></p> | ||
− | <p> | + | <p>CGACAGACTAAATTGGGCAGAGACAAGAGACAGGTACAGTGAAGCAACAGGTAGAGGAGTAGATTAACGAG<br> |
+ | AAAAATATCACATCAGTGAGGAGATTCTA[T/G]GTATCAACAGAAAGAACAAAGATCAGGGCTGCCTAATTGC<br> | ||
+ | TGACATGATGGGACTCACCGAGGGGGTGTTCCTGATTCTGTCTGGCACTCAGTTCACACT</p> | ||
<p><b>3. TAS1R1 rs34160967</b></p> | <p><b>3. TAS1R1 rs34160967</b></p> | ||
− | <p> | + | <p>AGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTGCAGCAGCAATCA<br> |
+ | GCTCTGCAGAGAATGCCAAGCTTTCATG[G/A]CACACACGATGCCCAAGCTCAAAGCCTTCTCCATGAGTTCTG<br> | ||
+ | CCTACAACGCATACCGGGCTGTGTATGCGGTGGCCCATGGCCTCCACCAGCTCCTGGG</p> | ||
<p><b>4. TAS1R3 rs307377</b></p> | <p><b>4. TAS1R3 rs307377</b></p> | ||
− | <p> | + | <p>CACACGCTCCTGGGTCAGCTTCGGCCTAGCGCACGCCACCAATGCCACGCTGGCCTTTCTCTGCTTCCTGGGC<br> |
+ | ACTTTCCTGGTGCGGAGCCAGCCGGGC[T/C]GCTACAACCGTGCCCGTGGCCTCACCTTTGCCATGCTGGCCTAC<br> | ||
+ | TTCATCACCTGGGTCTCCTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGTCCTCAG</p> | ||
<p><b>5. NEGATIVE CONTROL CLASSIC gRNA</b></p> | <p><b>5. NEGATIVE CONTROL CLASSIC gRNA</b></p> |
Revision as of 14:21, 5 October 2016
15/7/2016
In the lab today: Itay, May, Tomer
Planning synthetic DNA
Planning 8 synthetic SNPs and placing an order.
16/7/2016
In the lab today: Itay, May, Tomer
Planning synthetic DNA
Planning 7 synthetic SNPs and placing an order.
The final SNPs (Single nucleotide polymorphism)
Final Order Table
Number | Taste | RS |
---|---|---|
1 | Sweet | rs35874116 |
2 | Sweet | rs307355 |
3 | PTC | rs713598 |
4 | PTC | rs1726866 |
5 | PTC | rs1024639 |
6 | Consuming Alcohol | rs846672 |
7 | Coffee Bitterness | RS765007 |
8 | Coffee Bitterness | RS2234001 |
9 | Coffee Bitterness | RS2234012 |
10 | Coffee Bitterness | RS2227264 |
11 | Grapefruit juice bitterness | rs10772420 |
12 | Cilantro Preference | rs72921001 |
13 | Taste of NaC1 & Sour | rs17492553 |
14 | Taste of NaC1 & Sour | rs34160967 |
16 | Umami& Monosodium gluten | rs76755863 |
19/7/2016
In the lab today: Avital, Gal, Lidor
Planning 5 gRNA for CRISPR reaction
Taste/NoTaste | Spacer | PAM |
---|---|---|
No Taste | TCAGTTTTGTGGCAGATGAC | AGG |
No Taste | CACATCAGTGAGGAGATTCT | AGG |
No Taste | TCGTGTGTGTCATGAAAGCT | TGG |
No Taste | GGCCACGGGCACGGTTGTAGC | CGG |
(non targeting) | aggatcacct gagtccaggg | - |
1. TAS2R3 RS765007
CGACAGACTAAATTGGGCAGAGACAAGAGACAGGTACAGTGAAGCAACAGGTAGAGGAGTAGATTAACGAG
AAAAATATCACATCAGTGAGGAGATTCTA[T/G]GTATCAACAGAAAGAACAAAGATCAGGGCTGCCTAATTGC
TGACATGATGGGACTCACCGAGGGGGTGTTCCTGATTCTGTCTGGCACTCAGTTCACACT
2. TAS2R3 RS765007
CGACAGACTAAATTGGGCAGAGACAAGAGACAGGTACAGTGAAGCAACAGGTAGAGGAGTAGATTAACGAG
AAAAATATCACATCAGTGAGGAGATTCTA[T/G]GTATCAACAGAAAGAACAAAGATCAGGGCTGCCTAATTGC
TGACATGATGGGACTCACCGAGGGGGTGTTCCTGATTCTGTCTGGCACTCAGTTCACACT
3. TAS1R1 rs34160967
AGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTGCAGCAGCAATCA
GCTCTGCAGAGAATGCCAAGCTTTCATG[G/A]CACACACGATGCCCAAGCTCAAAGCCTTCTCCATGAGTTCTG
CCTACAACGCATACCGGGCTGTGTATGCGGTGGCCCATGGCCTCCACCAGCTCCTGGG
4. TAS1R3 rs307377
CACACGCTCCTGGGTCAGCTTCGGCCTAGCGCACGCCACCAATGCCACGCTGGCCTTTCTCTGCTTCCTGGGC
ACTTTCCTGGTGCGGAGCCAGCCGGGC[T/C]GCTACAACCGTGCCCGTGGCCTCACCTTTGCCATGCTGGCCTAC
TTCATCACCTGGGTCTCCTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGTCCTCAG
5. NEGATIVE CONTROL CLASSIC gRNA
(non targeting)
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