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<li class="c0"><span>Although our initial diffusion assays have shown that bacteria can diffuse through our semipermeable membrane, we have begun testing with other smaller filters including peptide dialysis membranes and 0.2 micron size filters.</span> | <li class="c0"><span>Although our initial diffusion assays have shown that bacteria can diffuse through our semipermeable membrane, we have begun testing with other smaller filters including peptide dialysis membranes and 0.2 micron size filters.</span> | ||
− | |||
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</li> | </li> | ||
<li class="c0"><span>See pages 15 - 16 of the <a href="https://drive.google.com/file/d/0B25REnfhyiNWM0hsNGtjRl9GWkk/view?usp=sharing">Device Manual</a>to tackle contamination issues.</span> | <li class="c0"><span>See pages 15 - 16 of the <a href="https://drive.google.com/file/d/0B25REnfhyiNWM0hsNGtjRl9GWkk/view?usp=sharing">Device Manual</a>to tackle contamination issues.</span> | ||
+ | </li> | ||
+ | <h4> Future Considerations</h4> | ||
+ | <li class="c0"><span>If we can determine a better membrane that prevents the diffusion of the bacteria, we can use a two layer semi permeable system where the first layer prevents the diffusion of the bacteria and a second layer which further filters BBI for diffusion.</span> | ||
</li> | </li> | ||
<li class="c0"><span class="c1">Public safety: Auxotrophy using Threonine was integrated in </span><span class="c1 c8">Bacillus</span><span class="c1"> making it unlikely it will survive outside of lab.</span> | <li class="c0"><span class="c1">Public safety: Auxotrophy using Threonine was integrated in </span><span class="c1 c8">Bacillus</span><span class="c1"> making it unlikely it will survive outside of lab.</span> |
Revision as of 03:16, 9 October 2016
Safety
Safety Considerations for Lab Work
All Principal Investigators, mentors, and undergraduate researchers were required to complete lab safety training and take safety courses developed by Environment Health and Safety (EHS) prior to working in the lab. The mandatory safety training included updated versions of the WHMIS course, the occupational health and safety course, the laboratory safety course, a hazard assessment course, an incident reporting and investigation course, a spill response course, a biosafety program course, a biosafety laboratory course, and a biosafety bloodborne pathogens course. The courses cover biological containment protocols, handling of hazardous materials such as liquid nitrogen, and disposal of waste as well as standard safety practices. All were required to take a test following each course, which certifies safe lab work under EHS Guidelines. All team members, advisors, and mentors received credit for each listed course and training program, and supervisors were present in the lab at all times to oversee undergraduate work.
The University of Calgary has a university-wide Biosafety Committee, whose guidelines for safe biological laboratory practices were adhered to throughout the project.The team’s lab benches and experimental plans were assessed and deemed safe to proceed with. The Environment Health and Safety (EHS) provided training and information on the hazards from the types of sources and each form of radiation. All researchers underwent safety training courses. The individuals who worked with irradiated cells received radiation safety training from the EHS.
Our project utilized Bacillus subtilis and a commonly used lab-strain of Escherichia coli TOP10. Both are non-pathogenic and non-infectious, as they are Biosafety Level 1 organisms (BSL-1). These organisms, therefore, posed no significant risk to researchers. Since these BSL1 cells (E.coli and B.subtilis) have GRAS labelling, our main project did not require ethics approval by the review boards. Some team members worked with HCT116 cell lines, and 1BR3 cell lines which are human colon carcinoma and human skin fibroblast cell and are classified as Biosafety Level 2(BSL-2).The cell lines were received from completely anonymous donors. We handled these cell lines at containment level 2 in accordance with the Bloodborne Pathogens Standard and Biosafety Committee guidelines.
Safety Considerations for Device
Patch Design
Choosing Patch Materials
Considering Human Use
Containment
Future Considerations
Future Considerations
A kill switch in Bacillus should be designed as engineering a kill switch into standardized plasmids could be useful for future iGEM competitions. Additionally, integrating BBI in multiple sites would give more auxotrophic sites, increasing the safety of using B.subtilis in the device.
Safe disposal:
See pages 11 and 12 of the Device Manualfor storage information.