Line 2: | Line 2: | ||
<html> | <html> | ||
+ | |||
<head> | <head> | ||
<meta charset-"utf-8"> | <meta charset-"utf-8"> | ||
Line 7: | Line 8: | ||
.slim ul li { | .slim ul li { | ||
font-size: 30px; | font-size: 30px; | ||
+ | } | ||
+ | .node { | ||
+ | cursor: pointer; | ||
+ | } | ||
+ | |||
+ | .node circle { | ||
+ | fill: #fff; | ||
+ | stroke: steelblue; | ||
+ | stroke-width: 1.5px; | ||
+ | } | ||
+ | |||
+ | .node text { | ||
+ | font: 10px sans-serif; | ||
+ | } | ||
+ | |||
+ | .link { | ||
+ | fill: none; | ||
+ | stroke: #ccc; | ||
+ | stroke-width: 1.5px; | ||
} | } | ||
</style> | </style> | ||
+ | <script src="https://d3js.org/d3.v4.min.js"></script> | ||
</head> | </head> | ||
− | + | ||
+ | <script> | ||
+ | |||
+ | var margin = {top: 20, right: 120, bottom: 20, left: 120}, | ||
+ | width = 960 - margin.right - margin.left, | ||
+ | height = 800 - margin.top - margin.bottom; | ||
+ | |||
+ | var i = 0, | ||
+ | duration = 750, | ||
+ | root; | ||
+ | |||
+ | var tree = d3.layout.tree() | ||
+ | .size([height, width]); | ||
+ | |||
+ | var diagonal = d3.svg.diagonal() | ||
+ | .projection(function(d) { return [d.y, d.x]; }); | ||
+ | |||
+ | var svg = d3.select("body").append("svg") | ||
+ | .attr("width", width + margin.right + margin.left) | ||
+ | .attr("height", height + margin.top + margin.bottom) | ||
+ | .append("g") | ||
+ | .attr("transform", "translate(" + margin.left + "," + margin.top + ")"); | ||
+ | |||
+ | d3.json("https://bl.ocks.org/mbostock/raw/4063550/flare.json", function(error, flare) { | ||
+ | if (error) throw error; | ||
+ | |||
+ | root = flare; | ||
+ | root.x0 = height / 2; | ||
+ | root.y0 = 0; | ||
+ | |||
+ | function collapse(d) { | ||
+ | if (d.children) { | ||
+ | d._children = d.children; | ||
+ | d._children.forEach(collapse); | ||
+ | d.children = null; | ||
+ | } | ||
+ | } | ||
+ | |||
+ | root.children.forEach(collapse); | ||
+ | update(root); | ||
+ | }); | ||
+ | |||
+ | d3.select(self.frameElement).style("height", "800px"); | ||
+ | |||
+ | function update(source) { | ||
+ | |||
+ | // Compute the new tree layout. | ||
+ | var nodes = tree.nodes(root).reverse(), | ||
+ | links = tree.links(nodes); | ||
+ | |||
+ | // Normalize for fixed-depth. | ||
+ | nodes.forEach(function(d) { d.y = d.depth * 180; }); | ||
+ | |||
+ | // Update the nodes… | ||
+ | var node = svg.selectAll("g.node") | ||
+ | .data(nodes, function(d) { return d.id || (d.id = ++i); }); | ||
+ | |||
+ | // Enter any new nodes at the parent's previous position. | ||
+ | var nodeEnter = node.enter().append("g") | ||
+ | .attr("class", "node") | ||
+ | .attr("transform", function(d) { return "translate(" + source.y0 + "," + source.x0 + ")"; }) | ||
+ | .on("click", click); | ||
+ | |||
+ | nodeEnter.append("circle") | ||
+ | .attr("r", 1e-6) | ||
+ | .style("fill", function(d) { return d._children ? "lightsteelblue" : "#fff"; }); | ||
+ | |||
+ | nodeEnter.append("text") | ||
+ | .attr("x", function(d) { return d.children || d._children ? -10 : 10; }) | ||
+ | .attr("dy", ".35em") | ||
+ | .attr("text-anchor", function(d) { return d.children || d._children ? "end" : "start"; }) | ||
+ | .text(function(d) { return d.name; }) | ||
+ | .style("fill-opacity", 1e-6); | ||
+ | |||
+ | // Transition nodes to their new position. | ||
+ | var nodeUpdate = node.transition() | ||
+ | .duration(duration) | ||
+ | .attr("transform", function(d) { return "translate(" + d.y + "," + d.x + ")"; }); | ||
+ | |||
+ | nodeUpdate.select("circle") | ||
+ | .attr("r", 4.5) | ||
+ | .style("fill", function(d) { return d._children ? "lightsteelblue" : "#fff"; }); | ||
+ | |||
+ | nodeUpdate.select("text") | ||
+ | .style("fill-opacity", 1); | ||
+ | |||
+ | // Transition exiting nodes to the parent's new position. | ||
+ | var nodeExit = node.exit().transition() | ||
+ | .duration(duration) | ||
+ | .attr("transform", function(d) { return "translate(" + source.y + "," + source.x + ")"; }) | ||
+ | .remove(); | ||
+ | |||
+ | nodeExit.select("circle") | ||
+ | .attr("r", 1e-6); | ||
+ | |||
+ | nodeExit.select("text") | ||
+ | .style("fill-opacity", 1e-6); | ||
+ | |||
+ | // Update the links… | ||
+ | var link = svg.selectAll("path.link") | ||
+ | .data(links, function(d) { return d.target.id; }); | ||
+ | |||
+ | // Enter any new links at the parent's previous position. | ||
+ | link.enter().insert("path", "g") | ||
+ | .attr("class", "link") | ||
+ | .attr("d", function(d) { | ||
+ | var o = {x: source.x0, y: source.y0}; | ||
+ | return diagonal({source: o, target: o}); | ||
+ | }); | ||
+ | |||
+ | // Transition links to their new position. | ||
+ | link.transition() | ||
+ | .duration(duration) | ||
+ | .attr("d", diagonal); | ||
+ | |||
+ | // Transition exiting nodes to the parent's new position. | ||
+ | link.exit().transition() | ||
+ | .duration(duration) | ||
+ | .attr("d", function(d) { | ||
+ | var o = {x: source.x, y: source.y}; | ||
+ | return diagonal({source: o, target: o}); | ||
+ | }) | ||
+ | .remove(); | ||
+ | |||
+ | // Stash the old positions for transition. | ||
+ | nodes.forEach(function(d) { | ||
+ | d.x0 = d.x; | ||
+ | d.y0 = d.y; | ||
+ | }); | ||
+ | } | ||
+ | |||
+ | // Toggle children on click. | ||
+ | function click(d) { | ||
+ | if (d.children) { | ||
+ | d._children = d.children; | ||
+ | d.children = null; | ||
+ | } else { | ||
+ | d.children = d._children; | ||
+ | d._children = null; | ||
+ | } | ||
+ | update(d); | ||
+ | } | ||
+ | |||
+ | </script> | ||
+ | |||
<div class="container-fluid page-heading" style="background-image: url(https://static.igem.org/mediawiki/2016/8/88/20160709_170224.jpg)"> | <div class="container-fluid page-heading" style="background-image: url(https://static.igem.org/mediawiki/2016/8/88/20160709_170224.jpg)"> |
Revision as of 13:16, 14 October 2016
Works
Experiments
- Kyujin Jeong
- JunHee Kim
Wiki
- Kyeonghoon Jeong
- Gitae Kim
Modelling
- WoongKyu Hyun
- Kyeonghoon Jeong
- SanHae Im
Collaboration
- Kyeonghoon Jeong
- JiSeung Lee
- KyuJin Jeong
- UiJin Han
Device
- JunHee Kim
- KyuJin Jeong
Media
- Kyeonghoon Jeong
- SanHae Im
- WoongKyu Hyun
- KyuJin Jeong
- JunHee Kim
Education
- ALL TEAM MEMBER
Funding
- Kyeonghoon Jeong
Poster
- DongHwan Park
- SanHae Im
- UiJin Han
Prensentation
Translation
- UiJin Han
- KyuJin Jeong
- WoongKyu Hyun
Attributions
도움주신분들
- 최인걸 교수님
- 최인걸 교수님
Experiments
- 최인걸 교수님
- 최인걸 교수님
We would like to thank everyone who has had a contributing role in the completion of our iGEM project. From the initial inception, through development and and at each apparent dead-end, we’ve been lucky enough to have a range of fantastic support and guidance. We also want to give thanks to everyone at iGEM for granting us this unique opportunity.
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For his talk on biofilms.