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| <article> | | <article> |
| <h1>Wednesday, August 17<sup>th</sup></h3> | | <h1>Wednesday, August 17<sup>th</sup></h3> |
− | | + | <h2>Results:</h2> |
| + | <h3>Sequencing:</h3> |
| + | <p>saCas9 Gibson Assembly was correctly assembled.</p> |
| + | <div class="row"> |
| + | <div class="col-sm-8"><img src="https://static.igem.org/mediawiki/2016/9/98/T--Northwestern--08_17_1.png" width="1921" height="1877" alt=""></div> |
| + | </div> |
| + | <h3>Transformation:</h3> |
| + | <p>The Gibson assemblies of signal sequences into Cas9 were unsuccessful.</p> |
| + | <div class="row"> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/b/b5/T--Northwestern--08_17_2.png" width="2447" height="2553" alt=""/> |
| + | <p><strong>Figure 1:</strong> Transformation positive control</p> |
| + | </div> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/7/72/T--Northwestern--08_17_3.png" width="2443" height="2685" alt=""/> |
| + | <p><strong>Figure 2:</strong> Transformation negative control</p> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/2/26/T--Northwestern--08_17_4.png" width="2447" height="2553" alt=""/> |
| + | <p><strong>Figure 3:</strong> Gibson assembly positive control</p> |
| + | </div> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/3/3d/T--Northwestern--08_17_5.png" width="2365" height="2409" alt=""/> |
| + | <p><strong>Figure 4:</strong> No enzyme negative control</p> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/e/e2/T--Northwestern--08_17_6.png" width="2447" height="2553" alt=""/> |
| + | <p><strong>Figure 5:</strong> gRNA + mRFP Gibson</p> |
| + | </div> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/c/cf/T--Northwestern--08_17_7.png" width="2443" height="2685" alt=""/> |
| + | <p><strong>Figure 6:</strong> INP + Cas9 Gibson</p> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/a/ac/T--Northwestern--08_17_8.png" width="2447" height="2553" alt=""/> |
| + | <p><strong>Figure 7:</strong> TorA + Cas9 Gibson</p> |
| + | </div> |
| + | </div> |
| + | <h2>Tasks:</h2> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Jordan</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li>Wrote a lab note for the Experiment page</li> |
| + | <li>Reserved room for another outreach discussion</li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Michelle</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul style=""> |
| + | <li>Ran gel on Golden Gate reactions |
| + | <div class="row"> |
| + | <div class="col-sm-6"><img src="https://static.igem.org/mediawiki/2016/9/92/T--Northwestern--08_17_9.png" width="2448" height="3264" alt=""/></div> |
| + | </div> |
| + | <ul><li>The gel shows the inserts and backbone separately at their respective locations. It does not indicate success. M4 is more dim than expected.</li></ul> |
| + | </li> |
| + | <li>Streaked Delisa cells out on plates |
| + | <ul> |
| + | <li>JC8031 on no-antibiotic plate</li> |
| + | <li>JC8031-pClyA-GFP-His on Cam plate</li> |
| + | </ul> |
| + | </li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Paul</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li>Pelleted 100 mL overnight expression cultures & put them in the freezer</li> |
| + | <li>Emailed grad student listserv asking for help purifying proteins</li> |
| + | <li>Looked through Cas9 purifying procedures </li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Sam</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li> Email more experts</li> |
| + | <li>Researched questions in the research doc</li> |
| + | <li>Started designing antibiotics forum</li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Sara </p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li>Autoclaved some tips</li> |
| + | |
| + | <li>Lab notebook</li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Shu</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li>PCR mRFP with Tyler |
| + | <ul> |
| + | <li> 2 x 50µL reactions </li> |
| + | <ul> |
| + | <li>1µL DMSO</li> |
| + | <li>1 µL mRFP backbone</li> |
| + | <li>1 µL Tet Lnrz for Cas9 FWD (10µM)</li> |
| + | <li>0.5 µL mRFP Reverse (10µM)</li> |
| + | <li>21.5 µL water </li> |
| + | </ul> |
| + | <li>Negative Control</li> |
| + | <ul> |
| + | <li>22 µL water</li> |
| + | <li>1µL DMSO</li> |
| + | <li>1 µL Tet Lnrz for Cas9 FWD (10µM)</li> |
| + | <li>1 µL mRFP Reverse (10µM)</li> |
| + | </ul> |
| + | <li>Conditions: |
| + | <div class="row"> |
| + | <div class="col-sm-10"><img src="https://static.igem.org/mediawiki/2016/7/7d/T--Northwestern--08_15_2.png" width="1600" height="280" alt=""/></div> |
| + | </div> |
| + | </li> |
| + | <li>DpnI digested PCR products |
| + | <ul> |
| + | <li>0.5 µL into each 50 µL</li> |
| + | <li>Incubated overnight at room temp</li> |
| + | </ul></li> |
| + | <li>Nanodropped mRFP linearized: 125 ng/µL, 260/230: 2.30</li> |
| + | </ul> |
| + | </li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| + | <div class="row"> |
| + | <div class="col-sm-2"> |
| + | <p>Tyler</p> |
| + | </div> |
| + | <div class="col-sm-10"> |
| + | <ul> |
| + | <li>PCR- Linearizing Cas9 for SS |
| + | <ul> |
| + | <li> 2 x 50µL reactions: |
| + | <ul> |
| + | <li>21.5 µL water</li> |
| + | <li>1 µL DMSO</li> |
| + | <li>0.5 µL cas9 1:3</li> |
| + | <li>1 µL SS_Lnrz_Fwd</li> |
| + | <li>1 µL SS_Lnrz_Rev</li> |
| + | <li>25 µL Taq Master Mix </li> |
| + | </ul> |
| + | </li> |
| + | <li> Negative Control: </li> |
| + | <ul> |
| + | <li>22 µL water</li> |
| + | <li>1 µL DMSO</li> |
| + | <li>1 µL SS_Lnrz_Fwd</li> |
| + | <li>1 µL SS_Lnrz_Rev</li> |
| + | <li>25 µL Taq Master Mix</li> |
| + | </ul> |
| + | <li>Conditions: |
| + | <div class="row"> |
| + | <div class="col-sm-10"><img src="https://static.igem.org/mediawiki/2016/c/cd/T--Northwestern--08_11_6.png" width="1600" height="280" alt=""></div> |
| + | </div> |
| + | </li> |
| + | <li>DpnI digest for 2 hours at 37°C</li> |
| + | </ul> |
| + | </li> |
| + | <li>PCR mRFP with Shu</li> |
| + | </ul> |
| + | </div> |
| + | </div> |
| </article> | | </article> |
| <footer id="nav"> | | <footer id="nav"> |