Difference between revisions of "Team:NYMU-Taipei/Notebook-Lab Book-RFP"

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<div id="wrap">
 
<div id="wrap">
 +
 
<div class="imageimage1">
 
<div class="imageimage1">
 
<div class="wordword1">
 
<div class="wordword1">
  
<h1>TITLE</h1><hr />
+
<div class="satisfy">
<p>Besides the fungal killing switch and the functional prototype that help reduce concerns over GMO</p>
+
<h1>RFP</h1></div>
 +
<div class="satisfysp">
 +
<h1>RFP</h1></div>
 +
<hr />
  
</div></div></div>
+
</div></div><br /></div>
  
 
<div class="expand">
 
<div class="expand">
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style="color: #666666 !important; text-shadow: 0px 0px 1px #000000 !important;  /*margin: 12px !important;*/  font-size: 18px !important;  text-decoration: none;">[Expand all]</a></p></center></div>
 
style="color: #666666 !important; text-shadow: 0px 0px 1px #000000 !important;  /*margin: 12px !important;*/  font-size: 18px !important;  text-decoration: none;">[Expand all]</a></p></center></div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/9</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 T-streaked onto agar plates</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 0); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 0); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">Week 2: (1-7 July)</div>
+
<div class="technology">7/10</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>The ordered primers were taken this week.</p>
+
<li><p style="font-size: 18px;">BBa_E1010 extracted the checked with restriction digestion (EocRI and PstI  747bp and 2029bp)</p></li>
<p>We would produce our biobricks, but the result was not like we expected after electrophoresis. Then we made colony PCR  and again do it for SOD and GPX. After this, we did digestion and also pTRE vector .</p>
+
<img src="https://static.igem.org/mediawiki/2014/7/7e/ATOMS-Notebook1.tif.png">
+
<img src="https://static.igem.org/mediawiki/2014/1/17/ATOMS-Notebook2.png">
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 1); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 1); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/16</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 checked with plasmid PCR (Primers: VF2-VR) (failed, no expected product)</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 2); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 2); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/17</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 checked again with plasmid PCR (failed, probably due to primer VF2-FR malfunction)</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 3); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 3); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/18</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 checked with plasmid PCR with newly design primers</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 4); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 4); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/19</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 checked with plasmid PCR with the addition of Mg2+</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 5); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 5); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/22</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 checked with Taq polymerase plasmid PCR (successful)</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 6); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 6); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/25</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">BBa_E1010 amplified with KOD polymerase PCR</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 7); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 7); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/26</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">RFP amplified with KOD polymerase PCR</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">RFP digested with EcoRI and BamHI</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 8); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 8); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">7/29</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">pBAR_RFP checked with KOD polymerase PCR (contaminated NC)</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 9); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 9); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">8/1</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">RFP checked with PCR</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 10); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 10); return false">[Collapse]</a></p>
 
</div>
 
</div>
  
<div class="technology">transformation efficiency </div>
+
<div class="technology">8/3</div>
 
<div class="thelanguage">
 
<div class="thelanguage">
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<li><p style="font-size: 18px;">RFP digested with EcoRI and BamHI for ligation</p></li>
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
+
  
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 11); return false">[Collapse]</a></p>
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 11); return false">[Collapse]</a></p>
</div>
 
 
<div class="technology">transformation efficiency </div>
 
<div class="thelanguage">
 
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
 
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
 
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
 
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
 
<p>To check our cell’s transformation efficiency 5 bacteria plates are transformed with different concentrated</p>
 
 
<p style="text-align:right;font-size:1.3em;"><a href="#" class="collapseLink" onClick="ddaccordion.collapseone('technology', 12); return false">[Collapse]</a></p>
 
 
</div>
 
</div>
  

Revision as of 00:14, 16 October 2016

RFP

RFP



7/9
  • BBa_E1010 T-streaked onto agar plates

  • [Collapse]

    7/10
  • BBa_E1010 extracted the checked with restriction digestion (EocRI and PstI 747bp and 2029bp)

  • [Collapse]

    7/16
  • BBa_E1010 checked with plasmid PCR (Primers: VF2-VR) (failed, no expected product)

  • [Collapse]

    7/17
  • BBa_E1010 checked again with plasmid PCR (failed, probably due to primer VF2-FR malfunction)

  • [Collapse]

    7/18
  • BBa_E1010 checked with plasmid PCR with newly design primers

  • [Collapse]

    7/19
  • BBa_E1010 checked with plasmid PCR with the addition of Mg2+

  • [Collapse]

    7/22
  • BBa_E1010 checked with Taq polymerase plasmid PCR (successful)

  • [Collapse]

    7/25
  • BBa_E1010 amplified with KOD polymerase PCR

  • [Collapse]

    7/26
  • RFP amplified with KOD polymerase PCR

  • RFP digested with EcoRI and BamHI

  • [Collapse]

    7/29
  • pBAR_RFP checked with KOD polymerase PCR (contaminated NC)

  • [Collapse]

    8/1
  • RFP checked with PCR

  • [Collapse]

    8/3
  • RFP digested with EcoRI and BamHI for ligation

  • [Collapse]