Difference between revisions of "Template:Dundee"

Line 1: Line 1:
−
<!DOCTYPE html>
+
<html>
−
<html lang="en">
+
−
  <head>
+
−
    <meta charset="utf-8">
+
−
    <meta http-equiv="X-UA-Compatible" content="IE=edge">
+
−
    <meta name="viewport" content="width=device-width, initial-scale=1">
+
−
    <!-- The above 3 meta tags *must* come first in the head; any other head content must come *after* these tags -->
+
−
    <title>Dundee 2016</title>
+
  
−
    <!-- Bootstrap -->
 
−
    <link href="css/bootstrap.min.css" rel="stylesheet">
 
  
−
    <!-- HTML5 shim and Respond.js for IE8 support of HTML5 elements and media queries -->
 
−
    <!-- WARNING: Respond.js doesn't work if you view the page via file:// -->
 
−
    <!--[if lt IE 9]>
 
−
      <script src="https://oss.maxcdn.com/html5shiv/3.7.2/html5shiv.min.js"></script>
 
−
      <script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
 
−
    <![endif]-->
 
−
 
−
  </head>
 
−
 
 
−
  <style>
 
−
 
−
body{
 
−
background-color:#1C203B;
 
−
}
 
−
#wrapper{
 
−
background-color:#1C203B;
 
−
}
 
−
#fbiHeaderLogo{
 
−
float:centre;
 
−
margin:0 auto;
 
−
padding:0px 0px 0px 0px;
 
−
 
−
}
 
−
 
−
#fbiHeaderLogo img{
 
−
width:100%;
 
−
}
 
  
  
−
.fixedwidth {
+
<style>
−
width:100%;
+
 
−
margin:0 auto;
+
 
−
}
+
 
−
+
 
−
.navbar navbar-default{
+
/********************************* DEFAULT WIKI SETTINGS  ********************************/
−
background-color:#10121E;
+
 
−
+
 
−
}
+
 
−
+
 
−
.container-fluid{
+
#sideMenu, #top_title {display:none;}
−
background-color:#10121E;
+
 
−
}
+
#content { padding:0px; width:1000px; margin-top:-7px; margin-left:0px;}
−
+
 
−
.navbar-header {
+
body {background-color:white; }
−
background-color:#10121E;
+
 
−
}
+
#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5 { margin-bottom: 0px; }
−
+
 
−
.navbar{
+
 
−
border-top:3px solid #283696;
+
 
−
border-bottom:3px solid #283696;
+
 
−
border-left:none;
+
/********************************* MENU ********************************/
−
border-right:none;
+
 
−
color:#F5F12B;
+
/* Wrapper for the menu */
−
}
+
 
−
#ContentWrapper{
+
.menu_wrapper {  
−
padding-left:20px;
+
 
−
padding-right:20px;
+
width:150px;
−
}
+
 
−
+
height:100vh;
−
#SummaryBox{
+
 
−
Background-color:#10121E;
+
position:fixed;
−
Margin:0 auto;
+
 
−
padding-left:40px;
+
padding:0px;
−
padding-right:40px;
+
 
−
border-radius:10px;
+
float:left;
−
border-right:2px solid #283696;
+
 
−
border-top:;
+
background-color:#f2f2f2;
−
height:100%;
+
 
−
padding-bottom:20px;
+
text-align:left;
−
margin-bottom:20px;
+
 
−
border-top:hidden;
+
}
−
color:white;
+
 
−
}
+
 
−
+
 
−
  </style>
+
 
−
    
+
/* styling for the menu items */
 +
 
 +
.menu_item {
 +
 
 +
width:100%;  
 +
 
 +
margin:-2px 0px 0px -20px;  
 +
 
 +
padding: 10px 10px; 
 +
 
 +
border-bottom: 1px solid #d3d3d3;
 +
 
 +
font-weight:bold;
 +
 
 +
color:#000000;
 +
 
 +
cursor: pointer;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* when hovering on a menu item */
 +
 
 +
.menu_item:hover {  
 +
 
 +
color:#000000;
 +
 
 +
background-color: #72c9b6;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* decoration icon for the menu buttons*/
 +
 
 +
.icon {
 +
 
 +
float:right; 
 +
 
 +
font-size:16px;
 +
 
 +
font-weight:bold;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
/* this is the icon for when the content is collapsed */
 +
 
 +
.plus::before {
 +
 
 +
content: "+";
 +
 
 +
}
 +
 
 +
/* this is the icon for when the content is expanded */
 +
 
 +
.less::before {
 +
 
 +
content: "–";
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* styling for the ul that creates the buttons */
 +
 
 +
ul.menu_items {
 +
 
 +
width:100%;
 +
 
 +
margin-left:0px;
 +
 
 +
padding:0px;
 +
 
 +
list-style: none;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* styling for the li that are the menu items */
 +
 
 +
.menu_items li {
 +
 
 +
width:90%;
 +
 
 +
margin-top:-2px;
 +
 
 +
padding: 15px 0px 15px 15px ;
 +
 
 +
display:block;
 +
 
 +
border-bottom: 1px solid #d3d3d3; 
 +
 
 +
text-align:left;
 +
 
 +
font-weight:bold;
 +
 
 +
text-decoration:none;
 +
 
 +
color:#000000;  
 +
 
 +
list-style-type:none;
 +
 
 +
cursor:pointer;
 +
 
 +
-webkit-transition: all 0.4s ease;
 +
 
 +
-moz-transition: all 0.4s ease;
 +
 
 +
-ms-transition: all 0.4s ease;
 +
 
 +
-o-transition: all 0.4s ease; transition: all 0.4s ease; 
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.menu_item a {
 +
 
 +
width: 100%;
 +
 
 +
margin-left: -20px;
 +
 
 +
padding: 11px 90px 12px 20px;
 +
 
 +
text-decoration: none;
 +
 
 +
color:black;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* When hovering on a menu item */
 +
 
 +
.menu_items li:hover {  
 +
 
 +
background-color:#72c9b6;
 +
 
 +
color: #000000;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* styling for the submenus */
 +
 
 +
.submenu {
 +
 
 +
width:100%;
 +
 
 +
display: none; 
 +
 
 +
font-weight:bold;
 +
 
 +
cursor:pointer;
 +
 
 +
 
 +
 
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* moving the margin for the submenu ul list */
 +
 
 +
ul.submenu {
 +
 
 +
width: 100%;
 +
 
 +
margin: 10px 0px -11px 0px;
 +
 
 +
list-style: none;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/*styling for the submenu buttons */
 +
 
 +
.submenu li {
 +
 
 +
width: 100%;
 +
 
 +
margin-left: 10px;
 +
 
 +
margin-bottom: 0px;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
/* hover state for the submenu buttons */
 +
 
 +
.submenu li a {
 +
 
 +
width: 100%;
 +
 
 +
padding: 5px 10px;
 +
 
 +
display: inline-block;
 +
 
 +
border-bottom: 1px solid #d3d3d3;
 +
 
 +
background-color:white;
 +
 
 +
text-decoration:none;
 +
 
 +
color:#000000;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
.submenu li a:hover  {
 +
 
 +
background-color:#000000;
 +
 
 +
color: #72c9b6;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
/* When the screen is smaller than 680px, the menu has the option to hide/show - this button controls that */
 +
 
 +
.collapsable_menu_control {
 +
 
 +
width:100%;
 +
 
 +
padding: 15px 0px;
 +
 
 +
display:none;  
 +
 
 +
  background-color:#000000;  
 +
 
 +
text-align:center; 
 +
 
 +
font-weight:bold;
 +
 
 +
color:#72c9b6;
 +
 
 +
cursor:pointer;
 +
 
 +
-webkit-transition: all 0.4s ease;
 +
 
 +
-moz-transition: all 0.4s ease;
 +
 
 +
-ms-transition: all 0.4s ease;
 +
 
 +
-o-transition: all 0.4s ease;
 +
 
 +
transition: all 0.4s ease;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* when hovering on that button */
 +
 
 +
.collapsable_menu_control:hover {
 +
 
 +
background-color: #72c9b6;
 +
 
 +
color:#000000; 
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/********************************* CONTENT OF THE PAGE ********************************/
 +
 
 +
 
 +
 
 +
 
 +
/* Wrapper for the content */
 +
 
 +
.content_wrapper {
 +
 
 +
width: 85%;
 +
 
 +
margin-left:150px;
 +
 
 +
padding:10px 0px;
 +
 
 +
float:left;
 +
 
 +
background-color:white;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/*LAYOUT */
 +
 
 +
.column  {
 +
 
 +
padding: 10px 0px;
 +
 
 +
float:left;
 +
 
 +
background-color:white;  
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.full_size {
 +
 
 +
width:100%;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.full_size img {
 +
 
 +
padding: 10px 15px;
 +
 
 +
width:96.5%;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.half_size {
 +
 
 +
width: 50%;
 +
 
 +
}
 +
 
 +
.half_size img {
 +
 
 +
padding: 10px 15px;
 +
 
 +
width: 93%;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
.clear {
 +
 
 +
clear:both;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.highlight {
 +
 
 +
width: 90%;
 +
 
 +
margin: auto;
 +
 
 +
padding: 15px 5px;
 +
 
 +
background-color: #f2f2f2;  
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
.judges-will-not-evaluate {
 +
 
 +
border: 4px solid #72c9b6;
 +
 
 +
display: block;
 +
 
 +
margin: 5px 15px;
 +
 
 +
width: 95%;
 +
 
 +
font-weight:bold;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
/*STYLING */
 +
 
 +
 
 +
 
 +
 
 +
/* styling for the titles */
 +
 
 +
.content_wrapper h1, .content_wrapper h2 {
 +
 
 +
padding:5px 15px;
 +
 
 +
border-bottom:0px;
 +
 
 +
color:#72c9b6;
 +
 
 +
 
 +
 
 +
 
 +
}
 +
 
 +
.content_wrapper h3, .content_wrapper h4, .content_wrapper h5, .content_wrapper h6 {
 +
 
 +
padding:5px 15px;
 +
 
 +
border-bottom:0px;
 +
 
 +
color: #000000; 
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
/* font and text */
 +
 
 +
.content_wrapper p {
 +
 
 +
padding:0px 15px;
 +
 
 +
font-size: 13px;
 +
 
 +
font-family:Tahoma, Geneva, sans-serif;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* Links */
 +
 
 +
.content_wrapper a {
 +
 
 +
font-weight: bold;
 +
 
 +
text-decoration: underline;
 +
 
 +
text-decoration-color:#72c9b6;
 +
 
 +
color: #72c9b6;
 +
 
 +
-webkit-transition: all 0.4s ease;
 +
 
 +
-moz-transition: all 0.4s ease;
 +
 
 +
-ms-transition: all 0.4s ease;
 +
 
 +
-o-transition: all 0.4s ease;
 +
 
 +
transition: all 0.4s ease;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* hover for the links */
 +
 
 +
.content_wrapper a:hover {
 +
 
 +
text-decoration:none;
 +
 
 +
color:#000000;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* non numbered lists */
 +
 
 +
.content_wrapper ul {
 +
 
 +
padding:0px 20px;
 +
 
 +
font-size: 13px;
 +
 
 +
font-family:Tahoma, Geneva, sans-serif;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* numbered lists */
 +
 
 +
.content_wrapper ol {
 +
 
 +
padding:0px;
 +
 
 +
font-size: 13px;
 +
 
 +
font-family:Tahoma, Geneva, sans-serif;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* Table */
 +
 
 +
.content_wrapper table {
 +
 
 +
width: 97%;
 +
 
 +
margin:15px 10px;  
 +
 
 +
border: 1px solid #d3d3d3;
 +
 
 +
border-collapse: collapse;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* table cells */
 +
 
 +
.content_wrapper  td {
 +
 
 +
padding: 10px;
 +
 
 +
vertical-align: text-top;
 +
 
 +
border: 1px solid #d3d3d3;  
 +
 
 +
border-collapse: collapse;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* table headers */
 +
 
 +
.content_wrapper th {
 +
 
 +
padding: 10px;
 +
 
 +
vertical-align: text-top;
 +
 
 +
border: 1px solid #d3d3d3;  
 +
 
 +
border-collapse: collapse;
 +
 
 +
background-color:#f2f2f2;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* Button class */
 +
 
 +
.button_click {
 +
 
 +
margin: 10px auto;
 +
 
 +
padding: 15px; width:12%; 
 +
 
 +
text-align:center;
 +
 
 +
font-weight:bold;
 +
 
 +
background-color: #72c9b6;
 +
 
 +
cursor:pointer; 
 +
 
 +
-webkit-transition: all 0.4s ease;
 +
 
 +
  -moz-transition: all 0.4s ease;
 +
 
 +
-ms-transition: all 0.4s ease;
 +
 
 +
-o-transition: all 0.4s ease;
 +
 
 +
transition: all 0.4s ease;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/* button class on hover */
 +
 
 +
.button_click:hover { 
 +
 
 +
background-color:#000000;
 +
 
 +
color:#72c9b6;
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
/********************************* RESPONSIVE STYLING ********************************/
 +
 
 +
 
 +
 
 +
 
 +
/* IF THE SCREEN IS LESS THAN 1000PX */
 +
 
 +
 
 +
 
 +
 
 +
@media only screen and (max-width: 1000px) {
 +
 
 +
 
 +
 
 +
 
 +
#content {width:100%; }
 +
 
 +
.menu_wrapper {width:15%;}
 +
 
 +
.content_wrapper {margin-left: 15%;}
 +
 
 +
.menu_item {display:block;}
 +
 
 +
.icon {display:none;}
 +
 
 +
.highlight {padding:10px 0px;}
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
/* IF THE SCREEN IS LESS THAN 680PX */
 +
 
 +
 
 +
 
 +
 
 +
@media only screen and (max-width: 680px) {
 +
 
 +
.collapsable_menu_control { display:block;}
 +
 
 +
.menu_item {display:none;}
 +
 
 +
.menu_wrapper { width:100%; height: 15%; position:relative;}
 +
 
 +
.content_wrapper {width:100%; margin-left:0px;}
 +
 
 +
.column.half_size {width:100%; }
 +
 
 +
.column img { width: 100%; padding: 5px 0px;}
 +
 
 +
.icon {display:block;}
 +
 
 +
.highlight {padding:15px 5px;}
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
</style>
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
<script>
 +
 
 +
 
 +
 
 +
 
 +
// This is the jquery part of your template.  Try not modify any of this code since it makes your menu work.
 +
 
 +
 
 +
 
 +
 
 +
$(document).ready(function() {
 +
 
 +
 
 +
 
 +
 
 +
$("#HQ_page").attr('id','');
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
if ( wgPageName.substring( 0,  8) == "Template")  {   // if the page is a template it displays the full name in a single line
 +
 
 +
$("#team_name").html( wgPageName );
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
else if (  ( (wgPageName.match(/\//g) || []).length ) == 0 ) {  // if it is the home page , just print the team's name
 +
 
 +
$("#team_name").html( wgPageName.substring( 5, wgPageName.length ) );
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
else {
 +
 
 +
// this adds the team's name as an h1
 +
 
 +
$("#team_name").html( wgPageName.substring( 5 , wgPageName.indexOf("/")  ) );
 +
 
 +
 
 +
 
 +
 
 +
// this adds the page's title as an h4
 +
 
 +
$("#page_name").html (    ( wgPageName.substring( wgPageName.indexOf("/") + 1, wgPageName.length ) ).replace( /\/|_/g , " ")  );
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
$('#accordion').find('.menu_item').click(function(){
 +
 
 +
 
 +
 
 +
 
 +
//Expand or collapse this panel
 +
 
 +
submenu = $(this).find('.submenu');
 +
 
 +
submenu.toggle();
 +
 
 +
 
 +
 
 +
 
 +
icon = $(this).find('.icon');
 +
 
 +
 
 +
 
 +
 
 +
if ( !$( submenu ).is(':visible') ) {
 +
 
 +
icon.removeClass("less").addClass("plus");
 +
 
 +
}
 +
 
 +
else {
 +
 
 +
icon.removeClass("plus").addClass("less");
 +
 
 +
}
 +
 
 +
 
 +
 
 +
 
 +
//Hide the other panels
 +
 
 +
$(".submenu").not(submenu).hide();
 +
 
 +
$(".icon").not(icon).removeClass("less").addClass("plus");
 +
 
 +
});
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<h1>Project Summary</h1>
 
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<p>Hello! We are the FBI (Fighting Bacterial Infections) team of Dundee and we are ready to present you our mission.</p>
 
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<p>The mission’s brainstorming process came from monthly meetings in which the team has come together and looked into previous projects and discussed potential products in the area of health, hygiene, pollution and farming. The choice of the final project came from a mutual agreement in which this project was identified as the most interesting and feasible, our iGEM team wanted to accept a challenging project which is achievable and thus will result in a good amount of data which can be modelled and displayed. Our project choice also has a wide public outreach option which is something other projects in the brainstorming sessions were lacking.</p>
 
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<p>Colicins are toxins released by bacteria which inhibit the growth of surrounding bacteria of the same or similar strains, enabling them to minimise their competition. We plan to harness this innate ability, targeting four different bacteria which can result in bacterial infections within the human gastro intestinal tract. This will include common causes of food poisoning such as E.coli, salmonella and shigella as well as helicobacter pylori which causes chronic inflammation of the stomach, potentially leading to ulcer formation and thus increased risk of stomach cancer.</p>
 
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<p>We plan to pinpoint the most specific bacteriocins for each of these bacteria and ligate them into E.coli, along with transcription promoting machinery which is activated at a low pH, so that production is only stimulated when the engineered E.coli reaches the stomach. This way target specificity can be achieved thus protecting the stomach microbes which are important for a healthy gut. With antibiotic resistance becoming a growing strain on public health, alternative treatment to bacterial infection is of increasing importance. This method could improve specificity of treatment while limiting the overuse of antibiotics. </p>
 
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<p>So far we have designed the colicins which we want to use and had them synthesised. Colicins have 3 domains, a receptor, translocation and toxic domain or warhead. We plan to alternate the toxic domains of the colicins to minimise the chance of resistance. We have identified alternative warheads for the colicins, picked promoters and selected some additional parts for our construct.</p>
 
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<p>Our iGEM team is aiming to create a universal biobrick useful for multiple applications. An alternative solution to relieve antibiotic over-usage. Fighting bacterial infections through harnessing bacteria’s innate ability to eliminate their competition. The vision is a marketable powdered product suitable for travel or home usage and useful for combatting bacterial infections of the human GI tract. Dundee’s FBI (Fighting Bacterial Infections) team are ready for action! </p>
 
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Revision as of 09:51, 8 July 2016