Difference between revisions of "Team:UGent Belgium/Primers"

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Line 19: Line 19:
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7624_Fw_Verification_pSB1C3</td>
+
     <td>oM7624_Fw_Verification_pSB1C3</td>
 
     <td>CCACCTGACGTCTAAGAAAC</td>
 
     <td>CCACCTGACGTCTAAGAAAC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7625_Rv_Verification_pSB1C3</td>
+
     <td>oM7625_Rv_Verification_pSB1C3</td>
 
     <td>GTATTACCGCCTTTGAGTGA</td>
 
     <td>GTATTACCGCCTTTGAGTGA</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7626_inaX?_fw</td>
+
     <td>oM7626_inaX?_fw</td>
 
     <td>ATGATCGTTGAAAAGATTTTGGCATTGCGTAC</td>
 
     <td>ATGATCGTTGAAAAGATTTTGGCATTGCGTAC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7627_inaX?_rv</td>
+
     <td>oM7627_inaX?_rv</td>
 
     <td>TCAGACATCGCGCAGTTCCTCGCCAGTGCC</td>
 
     <td>TCAGACATCGCGCAGTTCCTCGCCAGTGCC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7628_BsaI-inaZ_fw</td>
+
     <td>oM7628_BsaI-inaZ_fw</td>
 
     <td>ACGTGGTCTCTGATGAATCTCGACAAGGCGTTG</td>
 
     <td>ACGTGGTCTCTGATGAATCTCGACAAGGCGTTG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7629_BsaI-inaZ_rv*</td>
+
     <td>oM7629_BsaI-inaZ_rv*</td>
 
     <td>ACGTGGTCTCTAGTACTACTTTACCTCTATCCAGTC</td>
 
     <td>ACGTGGTCTCTAGTACTACTTTACCTCTATCCAGTC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7643_Rv_BB_strong</td>
+
     <td>oM7643_Rv_BB_strong</td>
 
     <td>AGGACTGAGCTAGCTGTCAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
     <td>AGGACTGAGCTAGCTGTCAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7644_Rv_BB_weak</td>
+
     <td>oM7644_Rv_BB_weak</td>
 
     <td>AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
     <td>AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7645_Fw_BB</td>
+
     <td>oM7645_Fw_BB</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAG</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7658_inaZ_GGfix_2_Fw</td>
+
     <td>oM7658_inaZ_GGfix_2_Fw</td>
 
     <td>AGTAGGTCTCAGTAACGAAACCGCTGGCAACCACAGTGATC</td>
 
     <td>AGTAGGTCTCAGTAACGAAACCGCTGGCAACCACAGTGATC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7659_inaZ_GGfix_3_Fw</td>
+
     <td>oM7659_inaZ_GGfix_3_Fw</td>
 
     <td>TAACGGTCTCAGGCGGGTGACCAAAGCAGATTGACCGCTG</td>
 
     <td>TAACGGTCTCAGGCGGGTGACCAAAGCAGATTGACCGCTG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7661_GFP_Fw-ATCT</td>
+
     <td>oM7661_GFP_Fw-ATCT</td>
 
     <td>AGTCGGTCTCAATCTAGTAAAGGAGAAGAACTTTTCACTGGAG</td>
 
     <td>AGTCGGTCTCAATCTAGTAAAGGAGAAGAACTTTTCACTGGAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7662_GFP_Fw-GATG</td>
+
     <td>oM7662_GFP_Fw-GATG</td>
 
     <td>AGTCGGTCTCAGATGAGTAAAGGAGAAGAACTTTTCACTGGAG</td>
 
     <td>AGTCGGTCTCAGATGAGTAAAGGAGAAGAACTTTTCACTGGAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7663_GFP_Rv-ATCT</td>
+
     <td>oM7663_GFP_Rv-ATCT</td>
 
     <td>AGCTGGTCTCAAGATCCGGTGCTGCCTTTGTAGAGCTCATCCATGCCATG</td>
 
     <td>AGCTGGTCTCAAGATCCGGTGCTGCCTTTGTAGAGCTCATCCATGCCATG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7664_GFP_Rv-TACT</td>
+
     <td>oM7664_GFP_Rv-TACT</td>
 
     <td>AGCTGGTCTCAAGTATTATTTGTAGAGCTCATCCATGCCATG</td>
 
     <td>AGCTGGTCTCAAGTATTATTTGTAGAGCTCATCCATGCCATG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7665_INP_RC_Fw</td>
+
     <td>oM7665_INP_RC_Fw</td>
 
     <td>AGTCGGTCTCAGATGCCGCAGAATGTGCAGAC</td>
 
     <td>AGTCGGTCTCAGATGCCGCAGAATGTGCAGAC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7666_INP_RC_Rv</td>
+
     <td>oM7666_INP_RC_Rv</td>
 
     <td>AGCTGGTCTCAAGATCCGGTGCTGCCCTTTACCTCTATCCAGTCATCGTCCTCGTC</td>
 
     <td>AGCTGGTCTCAAGATCCGGTGCTGCCCTTTACCTCTATCCAGTCATCGTCCTCGTC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7667_Lpp_Fw</td>
+
     <td>oM7667_Lpp_Fw</td>
 
     <td>AGTCGGTCTCAGATGAAAGCTACTAAACTGGTACTGG</td>
 
     <td>AGTCGGTCTCAGATGAAAGCTACTAAACTGGTACTGG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7668_Strep_Rv</td>
+
     <td>oM7668_Strep_Rv</td>
 
     <td>AGTCGGTCTCAAGTATTATTAATGGTGGTGATGGTGATGGGA</td>
 
     <td>AGTCGGTCTCAAGTATTATTAATGGTGGTGATGGTGATGGGA</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7669_FW_BB_LC</td>
+
     <td>oM7669_FW_BB_LC</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGGAGTCACTAAGGGTTAG</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGGAGTCACTAAGGGTTAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7670_RV_BB_weak_LC</td>
+
     <td>oM7670_RV_BB_weak_LC</td>
 
     <td>AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCGAGTCACTAAGGGCTAAC</td>
 
     <td>AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCGAGTCACTAAGGGCTAAC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7671_RV_insert</td>
+
     <td>oM7671_RV_insert</td>
 
     <td>AGTATATAAACGCAGAAAGGCC</td>
 
     <td>AGTATATAAACGCAGAAAGGCC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7672_FW_Insert_weak</td>
+
     <td>oM7672_FW_Insert_weak</td>
 
     <td>TTTACGGCTAGCTCAGTCCTAG</td>
 
     <td>TTTACGGCTAGCTCAGTCCTAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7673_inaZ_GGfix_1_Rv</td>
+
     <td>oM7673_inaZ_GGfix_1_Rv</td>
 
     <td>CAATTAGATCACTGTGGTTGCCAG</td>
 
     <td>CAATTAGATCACTGTGGTTGCCAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7674_inaZ_GGfix_2_Rv</td>
+
     <td>oM7674_inaZ_GGfix_2_Rv</td>
 
     <td>TCTTACCAGCGGTCAATCTGCTTTGGTC</td>
 
     <td>TCTTACCAGCGGTCAATCTGCTTTGGTC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7675_FW_BB_pSB3K3</td>
+
     <td>oM7675_FW_BB_pSB3K3</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAACGGGCAAG</td>
 
     <td>TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAACGGGCAAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7676_BB_mSA2_Fw</td>
+
     <td>oM7676_BB_mSA2_Fw</td>
 
     <td>GCTGCAGTCCGGCAAAAAAGGGCAAG</td>
 
     <td>GCTGCAGTCCGGCAAAAAAGGGCAAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7677_BB_mSA2_Rv</td>
+
     <td>oM7677_BB_mSA2_Rv</td>
 
     <td>CCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
     <td>CCGCGAATTCCAGAAATCATCCTTAGCG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7714_bb-pSC101_fw</td>
+
     <td>oM7714_bb-pSC101_fw</td>
 
     <td>CCTAGGACTGAGCTAGCTGTCAATAGGGCAGCAGATAGGGACGAC</td>
 
     <td>CCTAGGACTGAGCTAGCTGTCAATAGGGCAGCAGATAGGGACGAC</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7715_bb-pSC101_rv</td>
+
     <td>oM7715_bb-pSC101_rv</td>
 
     <td>GTGGGCCTTTCTGCGTTTATATACTCTTTTATTGGAGAGGTGGACAAG</td>
 
     <td>GTGGGCCTTTCTGCGTTTATATACTCTTTTATTGGAGAGGTGGACAAG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7722_BB_GFP_Fw</td>
+
     <td>oM7722_BB_GFP_Fw</td>
 
     <td>ACGTGGTCTCATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAGGTG</td>
 
     <td>ACGTGGTCTCATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAGGTG</td>
 
   </tr>
 
   </tr>
 
   <tr>
 
   <tr>
     <td>oMEMO7723_BB_GFP_Rv</td>
+
     <td>oM7723_BB_GFP_Rv</td>
 
     <td>AGTCGGTCTCACATCTAGAAGCGGCCGCGAATTCCAGAAATCATCC</td>
 
     <td>AGTCGGTCTCACATCTAGAAGCGGCCGCGAATTCCAGAAATCATCC</td>
 
   </tr>
 
   </tr>

Latest revision as of 21:30, 19 October 2016

Bootstrap 101 Template



Used primers


Primer Sequence
oM7624_Fw_Verification_pSB1C3 CCACCTGACGTCTAAGAAAC
oM7625_Rv_Verification_pSB1C3 GTATTACCGCCTTTGAGTGA
oM7626_inaX?_fw ATGATCGTTGAAAAGATTTTGGCATTGCGTAC
oM7627_inaX?_rv TCAGACATCGCGCAGTTCCTCGCCAGTGCC
oM7628_BsaI-inaZ_fw ACGTGGTCTCTGATGAATCTCGACAAGGCGTTG
oM7629_BsaI-inaZ_rv* ACGTGGTCTCTAGTACTACTTTACCTCTATCCAGTC
oM7643_Rv_BB_strong AGGACTGAGCTAGCTGTCAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG
oM7644_Rv_BB_weak AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCCAGAAATCATCCTTAGCG
oM7645_Fw_BB TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAG
oM7658_inaZ_GGfix_2_Fw AGTAGGTCTCAGTAACGAAACCGCTGGCAACCACAGTGATC
oM7659_inaZ_GGfix_3_Fw TAACGGTCTCAGGCGGGTGACCAAAGCAGATTGACCGCTG
oM7661_GFP_Fw-ATCT AGTCGGTCTCAATCTAGTAAAGGAGAAGAACTTTTCACTGGAG
oM7662_GFP_Fw-GATG AGTCGGTCTCAGATGAGTAAAGGAGAAGAACTTTTCACTGGAG
oM7663_GFP_Rv-ATCT AGCTGGTCTCAAGATCCGGTGCTGCCTTTGTAGAGCTCATCCATGCCATG
oM7664_GFP_Rv-TACT AGCTGGTCTCAAGTATTATTTGTAGAGCTCATCCATGCCATG
oM7665_INP_RC_Fw AGTCGGTCTCAGATGCCGCAGAATGTGCAGAC
oM7666_INP_RC_Rv AGCTGGTCTCAAGATCCGGTGCTGCCCTTTACCTCTATCCAGTCATCGTCCTCGTC
oM7667_Lpp_Fw AGTCGGTCTCAGATGAAAGCTACTAAACTGGTACTGG
oM7668_Strep_Rv AGTCGGTCTCAAGTATTATTAATGGTGGTGATGGTGATGGGA
oM7669_FW_BB_LC TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGGAGTCACTAAGGGTTAG
oM7670_RV_BB_weak_LC AGGACTGAGCTAGCCGTAAACTCTAGAAGCGGCCGCGAATTCGAGTCACTAAGGGCTAAC
oM7671_RV_insert AGTATATAAACGCAGAAAGGCC
oM7672_FW_Insert_weak TTTACGGCTAGCTCAGTCCTAG
oM7673_inaZ_GGfix_1_Rv CAATTAGATCACTGTGGTTGCCAG
oM7674_inaZ_GGfix_2_Rv TCTTACCAGCGGTCAATCTGCTTTGGTC
oM7675_FW_BB_pSB3K3 TGGGCCTTTCTGCGTTTATATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAACGGGCAAG
oM7676_BB_mSA2_Fw GCTGCAGTCCGGCAAAAAAGGGCAAG
oM7677_BB_mSA2_Rv CCGCGAATTCCAGAAATCATCCTTAGCG
oM7714_bb-pSC101_fw CCTAGGACTGAGCTAGCTGTCAATAGGGCAGCAGATAGGGACGAC
oM7715_bb-pSC101_rv GTGGGCCTTTCTGCGTTTATATACTCTTTTATTGGAGAGGTGGACAAG
oM7722_BB_GFP_Fw ACGTGGTCTCATACTAGTAGCGGCCGCTGCAGTCCGGCAAAAAAGGGCAAGGTG
oM7723_BB_GFP_Rv AGTCGGTCTCACATCTAGAAGCGGCCGCGAATTCCAGAAATCATCC