Difference between revisions of "Team:UPO-Sevilla/Part Collection"

 
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                           <a href="#" class="dropdown-toggle" data-toggle="dropdown">Team<b class="caret"></b></a>
 
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                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Attributions">Attributions</a></li>
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                         </li>
 
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<li class="dropdown">
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                                  <li><a href="about.html">Overview</a></li>
 
 
                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Description">Description</a></li>
 
                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Description">Description</a></li>
 +
                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Design">Design</a></li>
 +
                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Proof">Proof of Concept</a></li>
 +
                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Demonstrate">Demonstrate</a></li>
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Notebook">Notebook</a></li>
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                           <a href="about.html" class="dropdown-toggle" data-toggle="dropdown">Parts<b class="caret"></b></a>
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                           <a class="dropdown-toggle" data-toggle="dropdown">Parts<b class="caret"></b></a>
 
                             <ul class="dropdown-menu">
 
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                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Basic_Part">Basic Parts</a></li>
 
                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Basic_Part">Basic Parts</a></li>
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                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Notebook">Notebook</a></li>
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                                   <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Experiments">Experiments</a></li>
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  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Safety">Safety</a></li>
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  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Safety">Safety</a></li>
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Results">Results</a></li>
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<li class="dropdown">
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Software">Software</a></li>
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 +
                            </ul>
 +
                        </li>
 +
 
                         <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Collaborations">Collaborations</a></li>
 
                         <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Collaborations">Collaborations</a></li>
 
 
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                        <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Human_Practices">Human Practices</a></li>
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/HP/Silver">HP Silver</a></li>
 +
 
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Integrated_Practices">Integrated Practices</a></li>
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                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/HP/Gold">HP Gold</a></li>
 +
                                  <li><a href="https://2016.igem.org/Team:UPO-Sevilla/Engagement">Engagement</a></li>
 +
 
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 +
                        </li>                              
 
                     </ul>
 
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<div class="page-header">
 
<div class="page-header">
 
<h1 style="text-align:center">
 
<h1 style="text-align:center">
−
Part Collection
+
PART COLLECTION
 
</h1>
 
</h1>
 
</div>
 
</div>
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<td><a href="http://parts.igem.org/Part:BBa_K1973001" target="_blank">BBa_K1973001</a></td>
 
<td><a href="http://parts.igem.org/Part:BBa_K1973001" target="_blank">BBa_K1973001</a></td>
 
<td>Attenuator</td>
 
<td>Attenuator</td>
−
<td>nasF is an attenuator of transcription elongation</td>
+
<td><i>nasF</i> is an attenuator of transcription elongation</td>
 
<td>104</td>
 
<td>104</td>
 
</tr>
 
</tr>
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<td><a href="http://parts.igem.org/Part:BBa_K1973002" target="_blank">BBa_K1973002</a></td>
 
<td><a href="http://parts.igem.org/Part:BBa_K1973002" target="_blank">BBa_K1973002</a></td>
 
<td>Coding</td>
 
<td>Coding</td>
−
<td>XylS2 is a transcriptional activator of the Pm promoter</td>
+
<td>XylS2 is a mutant variant of XylS that is a transcriptional activator of the Pm promoter</td>
 
<td>987</td>
 
<td>987</td>
 
</tr>
 
</tr>
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<td><a href="http://parts.igem.org/Part:BBa_K1973037" target="_blank">BBa_K1973037</a></td>
 
<td><a href="http://parts.igem.org/Part:BBa_K1973037" target="_blank">BBa_K1973037</a></td>
 
<td>Coding</td>
 
<td>Coding</td>
−
<td>NasR is a RNA-binding protein that inhibits the transcription termination dependent on nasF</td>
+
<td>NasR is a RNA-binding protein that inhibits the transcription termination dependent on <i>nasF</i></td>
 
<td>1213</td>
 
<td>1213</td>
 
</tr>
 
</tr>
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</div>
 
</div>
 
</div>
 
</div>
 +
 +
<div class="hr-divider" style="margin-bottom:20px"></div>
 +
<div class="container">
 +
<div class="row">
 +
<div class="col-md-12 col-sm-10" align="center">
 +
<div style="width:80%;overflow:inherit">
 +
<h3 style="color:#2E64FE;text-align:center"><b>Pm PARTS COLLECTION</b></h3>
 +
<table class="table" style="font-size:75%">
 +
<tr bgcolor="#F5D0A9">
 +
<th style="text-align:center">Code</th>
 +
<th style="text-align:center">Description</th>
 +
<th>Length (pb)</th>
 +
</tr>
 +
<tr bgcolor="#A9F5BC">
 +
<td><a href="http://parts.igem.org/Part:BBa_K1973035" target="_blank">BBa_K1973035</a></td>
 +
 +
<td>Express the GlpF protein under the Pm1 promoter</td>
 +
<td>1257</td>
 +
</tr>
 +
</table>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
 
<div class="hr-divider" style="margin-bottom:20px"></div>
 
<div class="hr-divider" style="margin-bottom:20px"></div>
 
<div class="container">
 
<div class="container">
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<td>Express the LapG protein under the P<i>sal</i> promoter that is activated by NahR from miniTn7</td>
 
<td>Express the LapG protein under the P<i>sal</i> promoter that is activated by NahR from miniTn7</td>
−
<td></td>
+
<td>6106</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the LapG protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the LapG protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6218</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the YhjH protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the YhjH protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6344</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the PleD* protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the PleD* protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6940</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>P<i>sal</i> promoter, that is activated constitutively by NahR, with the attenuator <i>nasF</i> in miniTn7</td>
 
<td>P<i>sal</i> promoter, that is activated constitutively by NahR, with the attenuator <i>nasF</i> in miniTn7</td>
−
<td></td>
+
<td>5547</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the XylS2 protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the XylS2 protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6542</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the YhjH protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the YhjH protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>6232</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the PleD* protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the PleD* protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>6828</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the XylS2 protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the XylS2 protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>6430</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>The P<i>sal</i> promoter is activated by NahR that is under the constitutive Pr promoter in miniTn7</td>
 
<td>The P<i>sal</i> promoter is activated by NahR that is under the constitutive Pr promoter in miniTn7</td>
−
<td></td>
+
<td>5435</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the GlpF protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the GlpF protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>6304</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the GlpF protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the GlpF protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6416</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the GFP protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the GFP protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>6161</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the Epi protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the Epi protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>5963</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#A9F5BC">
 
<tr bgcolor="#A9F5BC">
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<td>Express the Epi protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
 
<td>Express the Epi protein under the P<i>sal</i> promoter with <i>nasF</i> from miniTn7</td>
−
<td></td>
+
<td>6075</td>
 
</tr>
 
</tr>
 
<tr bgcolor="#5CC35A">
 
<tr bgcolor="#5CC35A">
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<td>Express the PleD* and GlpF protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
 
<td>Express the PleD* and GlpF protein under the P<i>sal</i> promoter that is activated constitutively by NahR from miniTn7</td>
−
<td></td>
+
<td>7809</td>
 
</tr>
 
</tr>
 
</table>
 
</table>
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</div>
 
</div>
 
 
 +
 +
 
</div>
 
</div>
 
</section>
 
</section>

Latest revision as of 02:06, 19 October 2016

PART COLLECTION

BASIC PARTS COLLECTION

Code Part type Description Length (pb)
BBa_K1973000 Coding LapG is a protease that cleave the adhesine LapA 663
BBa_K1973001 Attenuator nasF is an attenuator of transcription elongation 104
BBa_K1973002 Coding XylS2 is a mutant variant of XylS that is a transcriptional activator of the Pm promoter 987
BBa_K1973013 Promoter Pm1 is one variant of the promoter for the xylS/Pm expression system 388
BBa_K1973014 Promoter Pm2 is one variant of the promoter for the xylS/Pm expression system 388
BBa_K1973015 Promoter Pm3 is one variant of the promoter for the xylS/Pm expression system 388
BBa_K1973016 Coding PleD * is a variation of the dyguanilate cyclase PleD that improves its activity 1385
BBa_K1973026 Coding GlpF is a glycerol channel in the inner membrane 861
BBa_K1973030 Coding Epi is a methylmalonyl-CoA epimerase 497
BBa_K1973033 Promoter The Psal promoter is activated by NahR that is under the constitutive Pr promoter 1039
BBa_K1973034 Coding YhjH is a c-diGMP phosphodiestarase 818
BBa_K1973036 Coding LapC is a component of the transporter of the adhesine LapA 1398
BBa_K1973037 Coding NasR is a RNA-binding protein that inhibits the transcription termination dependent on nasF 1213

Pm PARTS COLLECTION

Code Description Length (pb)
BBa_K1973035 Express the GlpF protein under the Pm1 promoter 1257

nahR-Psal PARTS COLLECTION

Code Description Length (pb)
BBa_K1973003 Express the LapG protein under the Psal promoter that is activated by NahR 1710
BBa_K1973004 Express the YhjH protein under the Psal promoter that is activated constitutively by NahR 1836
BBa_K1973005 Psal promoter, that is activated constitutively by NahR, with the attenuator nasF 1151
BBa_K1973007 Express the LapG protein under the Psal promoter with nasF 1822
BBa_K1973008 Express the YhjH protein under the Psal promoter with nasF 1948
BBa_K1973011 Express the PleD* protein under the Psal promoter that is activated constitutively by NahR 2432
BBa_K1973017 Express the XylS2 protein under the Psal promoter with nasF 2146
BBa_K1973018 Express the PleD* protein under the Psal promoter with nasF 2544
BBa_K1973020 Express the XylS2 protein under the Psal promoter that is activated constitutively by NahR 2034

miniTn7 PARTS COLLECTION

Code Description Length (pb)
BBa_K1973006 Express the LapG protein under the Psal promoter that is activated by NahR from miniTn7 6106
BBa_K1973009 Express the LapG protein under the Psal promoter with nasF from miniTn7 6218
BBa_K1973010 Express the YhjH protein under the Psal promoter with nasF from miniTn7 6344
BBa_K1973012 Express the PleD* protein under the Psal promoter with nasF from miniTn7 6940
BBa_K1973019 Psal promoter, that is activated constitutively by NahR, with the attenuator nasF in miniTn7 5547
BBa_K1973021 Express the XylS2 protein under the Psal promoter with nasF from miniTn7 6542
BBa_K1973022 Express the YhjH protein under the Psal promoter that is activated constitutively by NahR from miniTn7 6232
BBa_K1973023 Express the PleD* protein under the Psal promoter that is activated constitutively by NahR from miniTn7 6828
BBa_K1973024 Express the XylS2 protein under the Psal promoter that is activated constitutively by NahR from miniTn7 6430
BBa_K1973025 The Psal promoter is activated by NahR that is under the constitutive Pr promoter in miniTn7 5435
BBa_K1973027 Express the GlpF protein under the Psal promoter that is activated constitutively by NahR from miniTn7 6304
BBa_K1973028 Express the GlpF protein under the Psal promoter with nasF from miniTn7 6416
BBa_K1973029 Express the GFP protein under the Psal promoter that is activated constitutively by NahR from miniTn7 6161
BBa_K1973031 Express the Epi protein under the Psal promoter that is activated constitutively by NahR from miniTn7 5963
BBa_K1973032 Express the Epi protein under the Psal promoter with nasF from miniTn7 6075
BBa_K1973038 Express the PleD* and GlpF protein under the Psal promoter that is activated constitutively by NahR from miniTn7 7809