Difference between revisions of "Team:USP UNIFESP-Brazil/Parts"

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{{USP_UNIFESP-Brazil}}
 
 
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<img style="max-height: 120px;" src="https://static.igem.org/mediawiki/2016/thumb/f/f6/T--USP_UNIFESP-Brazil--LOGO.png/370px-T--USP_UNIFESP-Brazil--LOGO.png" />
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<p>AlgAranha Team USP_UNIFESP-Brazil</p>
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<h5>Note</h5>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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<p style="text-align: right; padding-right: 10.5%;"><a href="https://2016.igem.org/">iGEM 2016</a></p>
 
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<h5>Adding parts to the registry</h5>
 
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
 
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
 
 
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<ul class="menu">
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<li><a href="https://2016.igem.org/wiki/index.php?title=Team:USP_UNIFESP-Brazil">Home</a></li>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Team">Team</a></li>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Project" >Project</a></li>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Parts" class="active">Parts</a></li>
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<h5>What information do I need to start putting my parts on the Registry?</h5>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Interlab">Interlab</a></li>
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<p>The information needed to initially create a part on the Registry is:</p>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Human_Practices">Human Practices</a></li>
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<ul>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Awards">Awards</a></li>
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<li>Part Name</li>
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<li><a href="https://2016.igem.org/Team:USP_UNIFESP-Brazil/Attributions">Attributions</a></li>
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<li>Part type</li>
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<li>Creator</li>
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<li>Sequence</li>
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<li>Short Description (60 characters on what the DNA does)</li>
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<li>Long Description (Longer description of what the DNA does)</li>
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<li>Design considerations</li>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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<ul id=menu-lateral style="absolute; width:20%">
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<li><a href="#par">Part Collection</a></p>
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<p></p>
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<li><a href="#bas">Basic Parts</a></p>
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<li><a href="#com">Composite Parts</a></p>
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<h5>Inspiration</h5>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<h2>Part Collection</h2>
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<h5>Part Table </h5>
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                        <h5>Part Table </h5>
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<groupparts>iGEM2016 Example</groupparts>
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<div class="center" style="width: auto; margin-left: auto; margin-right: auto;"> <groupparts>iGEM16 USP_UNIFESP-Brazil</groupparts></div>
 
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<!-- This is how the table is generated. http://parts.igem.org/Help:Wiki_Tag_groupparts -->
 
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<p class="black"> Our major contribution of a Basic Part for the iGEM community is a BioBrick coding for the catalytic protein domain of lysostaphin (<a href= http://parts.igem.org/wiki/index.php?title=Part:BBa_K2136002>BBa_K2136002</a>) optimized for <i>Chlamydomonas reinhardtii genome</i>. This is an antibiotic peptide domain which can be used by future teams in the development of projects fighting antibiotic resistant <em>Staphylococcus</em> or working with its population dynamics.</p>
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<p class="black">Our favourite composite part was the 5' cassete for Chlamydomonas transgenic expression (<a href= http://parts.igem.org/wiki/index.php?title=Part:BBa_K2136010>BBa_K2136010</a>). We validated it through a series of measurements which show the production and secretion of mCherry protein by <em> Chlamydomonas</em>. A detailed descriptions is available in our <a href=https://2016.igem.org/Team:USP_UNIFESP-Brazil/Proof>Proof of concept</a> page.</p>
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Latest revision as of 04:47, 19 October 2016

AlgAranha Team USP_UNIFESP-Brazil

iGEM 2016

Part Collection

Part Table

<groupparts>iGEM16 USP_UNIFESP-Brazil</groupparts>

Basic Parts

Our major contribution of a Basic Part for the iGEM community is a BioBrick coding for the catalytic protein domain of lysostaphin (BBa_K2136002) optimized for Chlamydomonas reinhardtii genome. This is an antibiotic peptide domain which can be used by future teams in the development of projects fighting antibiotic resistant Staphylococcus or working with its population dynamics.

Composite Parts

Our favourite composite part was the 5' cassete for Chlamydomonas transgenic expression (BBa_K2136010). We validated it through a series of measurements which show the production and secretion of mCherry protein by Chlamydomonas. A detailed descriptions is available in our Proof of concept page.