Difference between revisions of "Team:JSNU-China/Notebook"

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<html lang="en">
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<meta charset="UTF-8">
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<title>notebook</title>
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<link rel="stylesheet" href="https://2016.igem.org/Template:JSNU-China/css/notebookcss?action=raw&ctype=text/css">
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</head>
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<body>
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<div id="top">
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<div id="smallnavigation">
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<span class="navlogo"><img src="https://static.igem.org/mediawiki/2016/d/dd/Jsnuchina_img_btn.jpg" width="80%"></span>
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<div id="smallnavs">
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China" class="smalltitle"><p >·Home</p></a>
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<div id="smallnavselect" ></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Description" class="smalltitle"><p>·Project <b>(Background | Experiment | Future work | Protocal)</b></p></a>
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<div id="smallnavselect" class="smallnavmouse"></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Parts" class="smalltitle"><p >· Parts</p></a>
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<div id="smallnavselect"></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Team" class="smalltitle"><p>·Team <b>(Members | Attributions | PI&Advisor | Acknowledgements)</b></p></a>
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<div id="smallnavselect"></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Human_Practices" class="smalltitle"><p >·Human Partice <b>(Sliver | Quick-flashing | Collaboration)</b></p></a>
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<div id="smallnavselect"></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Notebook" class="smalltitle"><p>·Notebook</p></a>
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<div id="smallnavselect"></div>
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</div>
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<div id="onesmallnav">
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<a href="https://2016.igem.org/Team:JSNU-China/Safety" class="smalltitle"><p >·Safety</p></a>
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<div id="smallnavselect"></div>
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</div>
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</div>
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</div>
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<div id="navigation">
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China/Safety"><img src="https://static.igem.org/mediawiki/2016/b/b3/Jsnuchina_safety.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/Safety#safety"><p class="p1"><center>Safety</center></p></a>
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</div>
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</div>
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China/Notebook"><img src="https://static.igem.org/mediawiki/2016/8/82/Jsnuchina_notebookchange.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/Notebook#notebook"><p class="p1"><center>Notebook</center></p></a>
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</div>
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</div>
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China/Human_Practices"><img src="https://static.igem.org/mediawiki/2016/d/df/Jsnuchina_human.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/HP/Silver"><p class="p2"><center>Silver</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/HP/Gold"><p class="p2"><center>Quick-flashing</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Collaborations"><p class="p2"><center>Collaboration</center></p></a>
  
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<a href="https://2016.igem.org/Team:JSNU-China/Team"><img src="https://static.igem.org/mediawiki/2016/2/2c/Jsnuchina_team.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/Team#member"><p class="p2"><center>Members</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Attributions"><p class="p2"><center>Attributions</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Team#advisors"><p class="p2"><center>PI&Advisor</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Team#acknow"><p class="p2"><center>Acknowledgements</center></p></a>
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</div>
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</div>
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China/Parts"><img src="https://static.igem.org/mediawiki/2016/9/98/Jsnuchina_parts.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/Parts#parts"><p class="p1"><center>Parts</center></p></a>
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</div>
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</div>
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China/Description"><img src="https://static.igem.org/mediawiki/2016/b/b2/Jsnuchina_project.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China/Description#background"><p class="p2"><center>Background</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Description#experience"><p class="p2"><center>Experiment</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Description#future"><p class="p2"><center>Future work</center></p></a>
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<a href="https://2016.igem.org/Team:JSNU-China/Description#protocal"><p class="p2"><center>Protocal</center></p></a>
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</div>
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</div>
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<div id="onenav" class="bignav">
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<a href="https://2016.igem.org/Team:JSNU-China"><img src="https://static.igem.org/mediawiki/2016/8/8f/Jsnuchina_home.png" width="80%"></a>
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<div class="mores">
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<a href="https://2016.igem.org/Team:JSNU-China"><p class="p1"><center>Home</center></p></a>
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</div>
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</div>
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                        <a href="https://www.youtube.com/watch?v=bmXjtAJiko4" target="_blank"><img src="https://static.igem.org/mediawiki/2016/4/45/Jsnuchina_jiaojuan.png" style="width:65%;height: 200px;position: absolute;top: 110px;right:2%;z-index: 3;"></a>
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</div>
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</div>
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<div id="content">
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<div id="notebook">
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<h2>Notebook</h2>
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<div class="hr"></div>
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<div id="notes">
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<div id="leftnote">
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<div id="onenote">
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<div id="evennote">
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<p>July 10th~12th</p>
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<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
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</div>
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<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Be familiar with experimental steps(including the configuration of soft AGAR,western blot)and listed experiment required list. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Revived cells,inoculation and expansion.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Select an appropriate auxin.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 14th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Configurate the lower gum of SDS-PAGE.</p>
 +
<p class="msg">2)&nbsp;&nbsp;Observing cell metamorphosis.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 16th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Reextracting protein and do western blot required list .</p>
 +
<p class="msg">2)&nbsp;&nbsp;Observing cell metamorphosis.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Finish the configuration of soft AGAR.</p>
 +
<p class="msg">4)&nbsp;&nbsp;Preparation of solid medium, in preparation for the transfection.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 18th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tried to make Tprotein band by western blot, but it failed.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
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<div id="evennote">
 +
<p>July 20th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
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</div>
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<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Did two western blot experiments, which were 193, 231,hela and hela, 231, to the end of  primary antibody incubation.</p>
 +
<p class="msg">2)Transformed competent cells into two boards, PX300F and PX300.</p>
 +
</div>
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</div>
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<div id="onenote">
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<div id="oddnote">
 +
<p>July 22th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">Did two western blot. The first experiment, did two pieces of gel to test T protein and KLF4 protein in gastric cancer cell lines. The other one, did two pieces of gel to test T protein and actin in hybrid system cancer cells.</p>
 +
<p class="msg">Because concentration was too low, the extraction of PX300 plasmid failed. Cultivated cells by shaking cells, prepared to extract plasmids. Coated PX300F plates succeeded, selected cloning cells to cultivate by shaking cells.</p>
 +
</div>
 +
</div>
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<div id="onenote">
 +
<div id="evennote">
 +
<p>July 24th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Finished the rest of yesterday’s western blot, analyzed the result of the experiment.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 26th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Finished the rest of yesterday’s work, observed the result of the experiment.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 28th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tested the content of actin and KLF4 protein in gastric cancer cell lines.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 4th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tested the content of KLF4 protein in gastric cancer cell lines.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 9th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;PCR amplification.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 11th~12th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;We obtained target fragments of KLF4 mutant by PCR amplification which called Ⅳunder an appropriate Temperature.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 15th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;We did the purification of PCR products.Second,we tested our results by electrophoresis and took photos,then did a diagraph analysis.</p>
 +
<p class="msg">Result : There was some impurity in the first gel ,so it was not a good result. We made errors when taking photos,so it was not a good result as well.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 17th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;We use the agarose gel select rophorosis to amplify 5 specific gene fragment in KLF4 and do the gel purification.</p>
 +
<p class="msg">2)&nbsp;&nbsp;Construct the accessible system.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 19th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Find whether it has the clonal phenomene or not ,it failed. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Do the PCR, digestion and purification.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 21th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/da/Jsnuchina_r2.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Extracting the plasmid, finally no clonal phenomenon ,It failed.</p>
 +
<p class="msg">2)&nbsp;&nbsp;Dectet the 293,293-klf4 52 cell under different connection survival rate.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 24th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/Jsnuchina_r1.png" style="width:10%;height:50px;position:absolute;top:5px;left:100%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Gel purification and transfer. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Coating the plate.</p>
 +
</div>
 +
</div>
 +
</div>
 +
<div id="notetree">
 +
<div id="trees">
 +
 +
</div>
 +
</div>
 +
<div id="rightnote">
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 13th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Configuration reagents used in this experiment. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Autoclaving reagent and experiment apparatus.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Observing cell metamorphosis.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 15th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Configurate the supernatant gum of SDS-PAGE ,extract protein, electrophoresis, trarsmembrane, primary antibody, secondary antibody, visualization and observe. </p>
 +
<p class="msg">2)&nbsp;&nbsp;the configuration of soft AGAR.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Observing cell metamorphosis.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 17th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Finished the rest of western blot, got the result of the experience. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Collected T293 cells and saving them by freezing.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 19th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Collected protein extraction cancer cells we need urgently.</p>
 +
<p class="msg">2)&nbsp;&nbsp;Did western blot twice to test the actin of gastric cancer cell and Hybrid system cancer cells separately.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Collected the information of Competent cells.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 21th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;The transformation of PX300F failed, transformed it again. </p>
 +
<p class="msg">2)&nbsp;&nbsp;The transformation of PX300F succeeded, shaked bacteria for the night, prepared extract plasmid.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Finished yesterday’s rest of western blot, second incubation resistance enhancement, analyzed the result of the experiment.</p>
 +
<p class="msg">4)&nbsp;&nbsp;Observed the cells, collected T293 cells and saved them by freezing.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 23th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;The result of yesterday’s western blot was unsatisfactory, tested partly T protein and actin in hybrid system cancer cells again. </p>
 +
<p class="msg">2)&nbsp;&nbsp;Extracted PX300 and PX300F plasmids.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>July 25th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Retested actin in hybrid system cancer cells </p>
 +
<p class="msg">2)&nbsp;&nbsp;Tested the content of KLF4 protein in gastric cancer cell lines.</p>
 +
<p class="msg">3)&nbsp;&nbsp;Tested the content of T protein in gastric cancer cell lines.</p>
 +
<p class="msg">4)&nbsp;&nbsp;Tested the content of T protein of 231 under 3 treatments.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>July 27th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tested the content of KLF4 protein in gastric cancer cell lines.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 3th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tested the content of actin and KLF4 protein in gastric cancer cell lines. </p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 7th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Tested the content of actin and KLF4 protein in cell 293 and cell 293KLF4.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 10th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Obtain target fragments of KLF4 mutant by PCR amplification which called ⅠⅡⅢ Ⅳ and Ⅴ. </p>
 +
<p class="msg">RESULT : ⅠⅡⅢ and Ⅴ succeeded. However, Ⅳ failed because of the inappropriate temperature.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 13th~14th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;We obtained target fragments of KLF4 mutant by PCR amplification which called ⅠⅡⅢ Ⅳ and Ⅴ for 6 tubes,and each tube contained 120 ml.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 16th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;We did electrophoresis and took photos successfully. </p>
 +
<p class="msg">2)&nbsp;&nbsp;We did double digestion and stayed overnight.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 18th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Transform the palsmid into cell.</p>
 +
<p class="msg">2)&nbsp;&nbsp;Coating to the plate.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 20th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Transfer the plasmid,coating to the plate.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="evennote">
 +
<p>August 23th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a2/Jsnuchina_l2.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;Do the PCR, F158-R385, digestion and purification.</p>
 +
</div>
 +
</div>
 +
<div id="onenote">
 +
<div id="oddnote">
 +
<p>August 25th</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/Jsnuchina_l1.png" style="width:10%;height:50px;position:absolute;top:5px;left:-10%;z-index:999;">
 +
</div>
 +
<div id="notemessage">
 +
<p class="msg">1)&nbsp;&nbsp;No clonal phenomenon, it failed. </p>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
</div>
 +
<div id="bottom">
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<div id="follows">
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<center>
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<h3>Follow us</h3>
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<img src="https://static.igem.org/mediawiki/2016/b/b0/Jsnuchina_jsnu.png" width="40%">
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</center>
 +
</div>
 +
<div id="address">
 +
<center><h3>Contact us</h3></center>
 +
<br>
 +
<p>Address:Jiangsu Normal University, 101 Shanghai Rd, Tongshan District, Xuzhou, China</p>
 +
<p>Mail:jsnuchina@163.com</p>
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<div id="totop">
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<h3>Top</h3>
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<img class="upimg" src="https://static.igem.org/mediawiki/2016/5/55/Jsnuchina_up.png" width="90%" style="float:right">
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<li>Chronological notes of what your team is doing.</li>
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<p>You can see what others teams have done to organize their notes:</p>
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<li><a href="https://2014.igem.org/Team:ATOMS-Turkiye/Notebook">2014 ATOMS-Turkiye</a></li>
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<li><a href="https://2014.igem.org/Team:Tec-Monterrey/ITESM14_project.html#tab_notebook">2014 Tec Monterrey</a></li>
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<li><a href="https://2014.igem.org/Team:Kyoto/Notebook/Magnetosome_Formation#title">2014 Kyoto</a></li>
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<li><a href="https://2014.igem.org/Team:Cornell/notebook">2014 Cornell</a></li>
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Latest revision as of 17:34, 19 October 2016

notebook

Notebook

July 10th~12th

1)  Be familiar with experimental steps(including the configuration of soft AGAR,western blot)and listed experiment required list.

2)  Revived cells,inoculation and expansion.

3)  Select an appropriate auxin.

July 14th

1)  Configurate the lower gum of SDS-PAGE.

2)  Observing cell metamorphosis.

July 16th

1)  Reextracting protein and do western blot required list .

2)  Observing cell metamorphosis.

3)  Finish the configuration of soft AGAR.

4)  Preparation of solid medium, in preparation for the transfection.

July 18th

1)  Tried to make Tprotein band by western blot, but it failed.

July 20th

1)  Did two western blot experiments, which were 193, 231,hela and hela, 231, to the end of primary antibody incubation.

2)Transformed competent cells into two boards, PX300F and PX300.

July 22th

Did two western blot. The first experiment, did two pieces of gel to test T protein and KLF4 protein in gastric cancer cell lines. The other one, did two pieces of gel to test T protein and actin in hybrid system cancer cells.

Because concentration was too low, the extraction of PX300 plasmid failed. Cultivated cells by shaking cells, prepared to extract plasmids. Coated PX300F plates succeeded, selected cloning cells to cultivate by shaking cells.

July 24th

1)  Finished the rest of yesterday’s western blot, analyzed the result of the experiment.

July 26th

1)  Finished the rest of yesterday’s work, observed the result of the experiment.

July 28th

1)  Tested the content of actin and KLF4 protein in gastric cancer cell lines.

August 4th

1)  Tested the content of KLF4 protein in gastric cancer cell lines.

August 9th

1)  PCR amplification.

August 11th~12th

1)  We obtained target fragments of KLF4 mutant by PCR amplification which called Ⅳunder an appropriate Temperature.

August 15th

1)  We did the purification of PCR products.Second,we tested our results by electrophoresis and took photos,then did a diagraph analysis.

Result : There was some impurity in the first gel ,so it was not a good result. We made errors when taking photos,so it was not a good result as well.

August 17th

1)  We use the agarose gel select rophorosis to amplify 5 specific gene fragment in KLF4 and do the gel purification.

2)  Construct the accessible system.

August 19th

1)  Find whether it has the clonal phenomene or not ,it failed.

2)  Do the PCR, digestion and purification.

August 21th

1)  Extracting the plasmid, finally no clonal phenomenon ,It failed.

2)  Dectet the 293,293-klf4 52 cell under different connection survival rate.

August 24th

1)  Gel purification and transfer.

2)  Coating the plate.

July 13th

1)  Configuration reagents used in this experiment.

2)  Autoclaving reagent and experiment apparatus.

3)  Observing cell metamorphosis.

July 15th

1)  Configurate the supernatant gum of SDS-PAGE ,extract protein, electrophoresis, trarsmembrane, primary antibody, secondary antibody, visualization and observe.

2)  the configuration of soft AGAR.

3)  Observing cell metamorphosis.

July 17th

1)  Finished the rest of western blot, got the result of the experience.

2)  Collected T293 cells and saving them by freezing.

July 19th

1)  Collected protein extraction cancer cells we need urgently.

2)  Did western blot twice to test the actin of gastric cancer cell and Hybrid system cancer cells separately.

3)  Collected the information of Competent cells.

July 21th

1)  The transformation of PX300F failed, transformed it again.

2)  The transformation of PX300F succeeded, shaked bacteria for the night, prepared extract plasmid.

3)  Finished yesterday’s rest of western blot, second incubation resistance enhancement, analyzed the result of the experiment.

4)  Observed the cells, collected T293 cells and saved them by freezing.

July 23th

1)  The result of yesterday’s western blot was unsatisfactory, tested partly T protein and actin in hybrid system cancer cells again.

2)  Extracted PX300 and PX300F plasmids.

July 25th

1)  Retested actin in hybrid system cancer cells

2)  Tested the content of KLF4 protein in gastric cancer cell lines.

3)  Tested the content of T protein in gastric cancer cell lines.

4)  Tested the content of T protein of 231 under 3 treatments.

July 27th

1)  Tested the content of KLF4 protein in gastric cancer cell lines.

August 3th

1)  Tested the content of actin and KLF4 protein in gastric cancer cell lines.

August 7th

1)  Tested the content of actin and KLF4 protein in cell 293 and cell 293KLF4.

August 10th

1)  Obtain target fragments of KLF4 mutant by PCR amplification which called ⅠⅡⅢ Ⅳ and Ⅴ.

RESULT : ⅠⅡⅢ and Ⅴ succeeded. However, Ⅳ failed because of the inappropriate temperature.

August 13th~14th

1)  We obtained target fragments of KLF4 mutant by PCR amplification which called ⅠⅡⅢ Ⅳ and Ⅴ for 6 tubes,and each tube contained 120 ml.

August 16th

1)  We did electrophoresis and took photos successfully.

2)  We did double digestion and stayed overnight.

August 18th

1)  Transform the palsmid into cell.

2)  Coating to the plate.

August 20th

1)  Transfer the plasmid,coating to the plate.

August 23th

1)  Do the PCR, F158-R385, digestion and purification.

August 25th

1)  No clonal phenomenon, it failed.

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Address:Jiangsu Normal University, 101 Shanghai Rd, Tongshan District, Xuzhou, China

Mail:jsnuchina@163.com

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