Difference between revisions of "Team:Oxford/Questionnaires"

 
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<div id="banner" style="background-image: url(https://static.igem.org/mediawiki/2016/thumb/8/84/Surveyyy.png/800px-Surveyyy.png);"></div>
  
 
<div class="container-fluid content-main">
 
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<nav class="col-md-3 bs-docs-sidebar navFont">
 
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         <ul id="sidebar" class="nav nav-stacked" data-spy="affix" data-offset-top="330">
 
             <li>
 
             <li>
                 <a href="#Idea">Project Selection</a>
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                 <a href="#Intro">Introduction</a>
 
             </li>
 
             </li>
 
             <li>
 
             <li>
                 <a href="#Patient-Feedback">Patient feedback</a>
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                 <a href="#Suv1">First Survey</a>
 
                         <ul class="nav nav-stacked">
 
                         <ul class="nav nav-stacked">
                           <li><a href="#SE">Side Effects</a></li>
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                           <li><a href="#1q1">Question 1</a></li>
                           <li><a href="#Price">Price</a></li>
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                           <li><a href="#1q2">Question 2</a></li>
                           <li><a href="#HDF">High Dosage Frequency</a></li>
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                           <li><a href="#1q3">Question 3</a></li>
 +
                          <li><a href="#Results1">Results</a></li>
 
                         </ul>
 
                         </ul>
 
             </li>
 
             </li>
 
             <li>
 
             <li>
                 <a href="#Gut-survival">Gut survival</a>
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                 <a href="#Suv2">Second Survey</a>
            </li>
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                        <ul class="nav nav-stacked">
             <li>
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                          <li><a href="#2q1">Question 1</a></li>
                 <a href="#Public-Outreach">Public and Legal Outreach</a>
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                          <li><a href="#2q2">Question 2</a></li>
            </li>
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                          <li><a href="#2q3">Question 3</a></li>
             <li>
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                          <li><a href="#2q4">Question 4</a></li>
                 <a href="#References">References</a>
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                          <li><a href="#2q5">Question 5</a></li>
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                          <li><a href="#2q6">Question 6</a></li>
 +
                          <li><a href="#Results2">Results</a></li>
 +
                        </ul>
 +
             </li><li>
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                 <a href="#Suv3">Third Survey</a>
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                        <ul class="nav nav-stacked">
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                          <li><a href="#3q1">Question 1</a></li>
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                          <li><a href="#3q2">Question 2</a></li>
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                          <li><a href="#3q3">Question 3</a></li>
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                          <li><a href="#3q4">Question 4</a></li>
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                          <li><a href="#3q5">Question 5</a></li>
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                          <li><a href="#Results3">Results</a></li>
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                        </ul>
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             </li><li>
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                 <a href="#Suv4">Fourth Survey</a>
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                        <ul class="nav nav-stacked">
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                          <li><a href="#4q1">Question 1</a></li>
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                          <li><a href="#4q2">Question 2</a></li>
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                          <li><a href="#4q3">Question 3</a></li>
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                          <li><a href="#4q4">Question 4</a></li>
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                          <li><a href="#4q5">Question 5</a></li>
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                          <li><a href="#4q6">Question 6</a></li>
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                          <li><a href="#4q7">Question 7</a></li>
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                          <li><a href="#Results4">Results</a></li>
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                        </ul>
 
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  <div class="col-md-9 content-right" style="background-color: #fff;">
 
  <div class="col-md-9 content-right" style="background-color: #fff;">
  
<h1>Integrated Human Practices</h1>
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<div class="pageTitle pageTitlePurple">Surveys</div>
<section id="Idea">
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<section id="Intro">
<h2>Project Selection</h2>
+
<h2>Introduction</h2>
 
<p>
 
<p>
One of the main benefits of taking part in iGEM rather than, for example, a traditional summer lab project, is the ability to investigate your project outside of the lab and examine its place in the wider world. Scientific projects do not just exist in the context of the lab, they have the potential to have a huge and reaching impact of society, and so the integration of human practices into these projects is not just desirable, but necessary.  
+
Engaging with the public was a key part of our project in order to ensure that the results of the project were of benefit and acceptable to all. In order to do this we carried out surveys with members of the public at strategic points to guide the project in the best direction.
 
</p>
 
</p>
 +
</section>
 +
 +
<section id="Suv1">
 +
<h2>First Survey</h2>
 
<p>
 
<p>
We have integrated human practices research at every stage of our project, from inception to execution, to ensure that we address all the desires and concerns of patients and the public.  
+
We carried out our first survey before Christmas to investigate the issues people would like to be addressed by an interdisciplinary science project. When combined with our teams skills this guided the overall direction of our project down the iGEM therapeutic track.
 
</p>
 
</p>
 +
<section id="1q1">
 +
<h3>Do you think that synthetic biology can contribute towards the solution of serious global challenges?</h3>
 
<p>
 
<p>
This began when we were still proposing ideas for our project, and we talked to the public to determine what kind of issues they would like to be addressed by an interdisciplinary science project. We found that the majority of individuals wanted us to address medical issues. This led us to hone our potential ideas to those that fell under the banner of therapeutics.  
+
All of our respondents thought that synthetic biology could contribute to serious global challenges which reassured us that the outcome of our synthetic biology project would be useful, and that this is an area of science that the public have faith in.
 
</p>
 
</p>
 +
</section>
 +
<section id="1q2">
 +
<h3>What area would you like a project of this sort to focus on?</h3>
 
<p>
 
<p>
Once deciding to address a medical problem, we were very aware that the integration of human practices would be key to our project. Also, we were aware that we would need to address human practices in 2 main ways:
+
We found that the majority of people questioned favoured medical treatments as their preferred area of research. This question was a free answer although the question prompted some answers: "For example: diagnostics, energy, environment, food and nutrition, information processing, manufacturing, therapeutics etc." This may have had an impact on what people chose, but out of the different iGEM tracks available medical and therapeutic purposes were the most preferred.  
<li><p>Establishing a dialogue with patients and doctors to integrate their requirements and desires into our design.</p></li>
+
<li><p>Approaching the general public to promote the advantages of synthetic biology and address their concerns with genetically engineered bacterial therapeutics.</p></li>
+
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/9/99/T--Oxford--1.1.jpg">
 +
</section>
 +
<section id="1q3">
 +
<h3>What specific problem would you like to have solved by an interdisciplinary, synthetic biology-based project?</h3>
 
<p>
 
<p>
Most important to the development of our project was the continuous discourse we maintained with patients and doctors.  
+
This was a unprompted, free answer question and gave us answers such as Malaria, treatment of the common cold and asthma treatment. Many were quite vague and not  feasible for us to solve in one summer, but one person suggested probiotic supplements which got us interested in using probiotics as a treatment for diseases in general.
 
</p>
 
</p>
 +
</section>
 +
<section id="Results1">
 +
<h3>Results</h3>
 
<p>
 
<p>
Our discourse began when we met with Dr Garry Brown, a medical lecturer who gave the lecture that initially inspired our desire to create a treatment for Wilson’s Disease. Having previously treated patients with Wilson’s Disease, he made it clear that current treatments were unsatisfactory due to significant side effects and had not been improved since the 1980s. He expressed a deal of interest in our idea, and following this meeting we began to investigate copper chelators that could be constitutively expressed by our bacteria.  
+
This survey was designed to give us some idea as to the direction our project should take. Based on this we decided to investigate the use of bacteria as a medical treatment.
 
</p>
 
</p>
 +
</section>
 
</section>
 
</section>
  
<section id="Patient-Feedback">
+
<section id="Suv2">
<h2>Patient Feedback</h2>
+
<h2>Second Survey</h2>
 
<p>
 
<p>
Our initial idea was to produce bacteria that could be ingested prior to a meal that would constitutively express copper chelators before being excreted, taking the bound copper with them. This changed when we talked to patients. Our initial patient contact was Valerie Wheater, who is also the Treasurer of the Wilson’s Disease Support Group. When we spoke to Valerie she expressed the dissatisfaction patients had for the current drugs used to treat Wilson’s Disease: penicillamine and trientine dihydrochloride. She emphasised the restrictive requirement of the treatments needing constant refrigeration, whilst also having to be taken up to 4 times a day. She also made it clear that many patients were keen for a longer treatment. Even from this initial discussion, we knew that we would have to alter our design to act in the long term, rather than requiring multiple doses throughout the day.
+
In this survey we aimed to investigate the public’s awareness of scientific issues that arise from our project to establish the areas we need to focus on in our outreach activities, assess the level of support our project might have if it were to be used as a treatment in the future and to get an initial idea of whether people would prefer a single or repetaed treatment plan which effected the designs of our genetic circuit.
 
</p>
 
</p>
 +
<section id="2q1">
 +
<h3>How old are you?</h3>
 
<p>
 
<p>
Following this, we spoke to a variety of patients at the Wilson’s Disease Support Group AGM. From these discussions, we identified 3 key limitations with current treatments, and integrated the ways in which we could address them into our design.
+
We found that we had an uneven spread of age groups  among our respondents with a heavy bias towards under 21s. This is probably because the survey was shared via Facebook which has a lot of younger users, and shared particularly among our friends who we requested fill it in. In addition a lot of our friends aged under 21 are doing biology-related degrees at university so their knowledge may not be representative of their age group as a whole. We decided to split the results into under 21 and over 21 as the older groups were so sparsely populated there was little advantage in distinguishing between them.
 
</p>
 
</p>
<section id="SE">
+
<img src="https://static.igem.org/mediawiki/2016/b/b3/T--Oxford--2.1.jpg">
<h3> Side Effects</h3>
+
</section>
 +
<section id="2q2">
 +
<h3>Had you heard of genetic engineering before this survey?</h3>
 
<p>
 
<p>
Concern: Trientine Dihydrochloride and Penicillamine are currently used to treat Wilson’s Disease. Both have severe associated side effects, particularly Penicillamine. Despite this, due to it being the subject of more in-depth research, penicillamine is usually the first treatment prescribed, followed by trientine if adverse effects are observed.
+
We found that 90% people surveyed have heard of genetic engineering before this survey and we concluded that informing about genetic engineering shouldn't be our priority in our outreach activities.  
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a1/T--Oxford--2.2.jpg">
 +
</section>
 +
<section id="2q3">
 +
<h3>Had you heard of synthetic biology before this questionnaire?</h3>
 
<p>
 
<p>
Serious adverse effects such as bone marrow suppression, anorexia, vomiting and diarrhoea are observed in 20-30% of cases (1). Infrequently, there may be cases of nephropathy (kidney disease) and hepatotoxicity (drug induced liver disease). Side effects associated with trientine include nausea, skin rash, severe stomach pains, diarrhoea, and anaemia (2).  
+
Only a small majority overall have heard of synthetic biology so we concluded it would be worth performing some outreach projects to make people more aware of synthetic biology so they can be more informed and engaged in our project. A majority of older people had not heard of synthetic biology before so ideally it this is the age group where we would be focussing our efforts. We concluded that we should target our outreach to more established forms of communication such as radio rather than focusing on just social media which has a much younger demographic.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e4/T--Oxford--2.3.jpg">
 +
</section>
 +
<section id="2q4">
 +
<h3>Have you heard of Orphan Diseases (e.g. Wilson’s Disease)?</h3>
 
<p>
 
<p>
Impact on design: Following the discussion of side effects, we investigated the risks associated with probiotic bacteria, further information can be found <a href="https://2016.igem.org/Team:Oxford/Safety">here</a>. Side effects from probiotics, if any, tend to be mild and digestive. This concern primarily influenced the choice of chassis that we would ultimately want to use for our therapeutic.
+
Our results showed that Orphan diseases need greater awareness as most people haven’t heard of them. When awareness of rare disease is low amongst both the public and medical professionals, patients of these diseases are less likely to get a correct diagnosis. Public awareness also affects the research allocation to rare diseases which are often underfunded.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/f/fc/T--Oxford--2.4.jpg">
 +
</section>
 +
<section id="2q5">
 +
<h3>If your doctor recommended the use of genetically engineered bacteria to treat an illness, would you use it?</h3>
 
<p>
 
<p>
Insert table from Eric? here concerning different bacteria.
+
Already a majority of people said they would use a genetically engineered bacteria as a treatment and a third of people didn’t know. If they were given more information about the treatment they might be persuaded to accept it so we should aim to do inform about the nature of our bacteria as we work on our project. Is the decision to take a treatment largely due to a doctor's recommendation or are other people making the decision for themselves from their own knowledge of synthetic biology? We found that a larger proportion of younger people prepared to take a probiotic treatment and previously a greater number of these people had heard of genetic engineering, suggesting this decision is linked to knowledge levels. this does not however account for the fact that attitudes to medical advice varies between age groups.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a0/T--Oxford--2.5.jpg">
 +
</section>
 +
<section id="2q6">
 +
<h3>If you were given the option between taking a daily pill for an extended period of time, or a single probiotic bacterial pill to treat an illness, which would you choose?</h3>
 
<p>
 
<p>
From this and discussion with Professor Kevin Foster (see below), we decided that ideally we would use <i>E. coli</i> K-12 Nissle 1917 to express our bacteria. Further information on risks specific to this strain can be found <a href="https://2016.igem.org/Team:Oxford/Safety#chassis">here</a>.  
+
A single pill is preferable to a daily pill for the majority of respondents, however our results show that most people would follow their doctor’s recommendation. This suggests in previous question that many of the responses in favour of such a treatment are in large part guided by the doctor's recommendation. We could do another survey to clarify this by repeating the question without giving them the option of allowing a doctor to choose for them. This question highlights how important it is to inform doctors not just patients of our treatment as their input would be required to make our treatment widely acceptable. We decided that we should discuss our treatment with doctors to get their opinions and work out what we would have to do to convince them that our probiotic is safe.  
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/f/f1/T--Oxford--julia-2.6new.png"/>
 
</section>
 
</section>
<section id="Price">
+
<section id="Results2">
<h3>Price</h3>
+
<h3>Results</h3>
 
<p>
 
<p>
Concern: Both Penicillamine and Trientine Dihydrochloride are very expensive. Trientine Dihydrochloride production in the UK is under the monopoly of a single company, and over the last 2 years there has been a 600% increase in the cost of the drug, despite the relatively inexpensive production costs. At £3,400 per 100 capsules, it is becoming increasingly difficult for the NHS cover the cost of the drug, particularly as the standard dose is 4 per day. In the USA, the situation is even worse, with both Penicillamine and Trientine Dihydrochloride having a price of over $22,000 per 100 capsules. These price hikes are making it very difficult for patients to get the treatment they need to prevent their condition from regressing.  
+
In conclusion, the majority of people have heard of genetic engineering and synthetic biology. If we were to raise awareness of these issues then we should focus on older people rather than younger people, although there is benefit in talking to as many people as possible. Most people have not heard of orphan diseases so raising awareness of these should be a priority and we will try to do this. We found that people were wiling to follow what their doctors recommended so we should ensure that doctors are informed of our treatments, rather than just focusing on the view of patients. We should do another survey to clarify whether a single or daily dose is preferable, and maybe remove the reference to doctor's recommendation as this might be influencing people’s responses.
 
</p>
 
</p>
 +
</section>
 +
</section>
 +
 +
<section id="Suv3">
 +
<h2>Third Survey</h2>
 
<p>
 
<p>
Impact on design: One of the intrinsic benefits of developing a probiotic treatment is that our therapeutic has the capacity to provide a significantly cheaper treatment as bacterial cell cultures are relatively inexpensive to maintain.  
+
This survey was designed to investigate the ethical issues people might have with our project so we can respond to these and try and minimise these concerns through the design of project or generate counter arguments.
 
</p>
 
</p>
 +
<section id="3q1">
 +
<h3>How old are you?</h3>
 
<p>
 
<p>
The impact that price had on the development of our genetic circuit is related to the patient’s desire for a longer term treatment, which is discussed below under “High Dosage Frequency”.
+
This time we had fewer responses than before and some groups have no people in them at all. Therefore we will split responses into under and over 21 like before. We think the reasons for this age spread are the same as those seen in survey 1 but older groups are even less represented in this survey because there are fewer responses overall.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/e/e1/T--Oxford--3.1.jpg">
 
</section>
 
</section>
<section id="HDF">
+
<section id="3q2">
<h3>High Dosage Frequency</h3>
+
<h3>Do you understand the term 'genetically-engineered bacteria'?</h3>
 
<p>
 
<p>
Concern: One of the significant issues that patients expressed the current treatment regime was the requirement for medicine to be refrigerated, whilst also being taken 4 times daily. Obviously, this requirement is limiting, and patients were keen for the development of a longer term treatment.
+
We covered this topic in the previous survey and received more responses in that. We will not analyse the data from this question therefore due to the smaller sample size.
 
</p>
 
</p>
 +
</section>
 +
<section id="3q3">
 +
<h3>If your doctor recommended the use of genetically-engineered bacteria to treat an illness, would you use it?</h3>
 
<p>
 
<p>
Impact on design: Initially, our idea was to produce bacteria that would constitutively express copper chelators. Patients would take these in conjunction with a meal, and excess copper would be bound and excreted. However, this would require constant applications of the treatment.  
+
Again this question was better covered in the previous survey.
 
</p>
 
</p>
 +
</section>
 +
<section id="3q4">
 +
<h3>What do you think people's concerns are about the use of genetically-engineered bacteria (e.g., releasing genetically engineered bacteria into the environment, safety for the patient, "playing God", unjust or unnatural etc.)?</h3>
 
<p>
 
<p>
Following our discussion with patients, where they expressed their concerns with current treatments prices and the high dosage frequency, we decided that a longer term treatment would be necessary. We redesigned our genetic circuitry so that chelator expression would be under the control of a copper-sensitive promoter. This has the advantage of conferring safety benefits - the chelator is only expressed when required. In addition, the metabolic load on the bacterial cells is lowered, meaning that they are more likely to successfully and competitively persist in the gut microbiome. For information on the other safety measures we explored, please click <a href="https://2016.igem.org/Team:Oxford/Safety">here</a>. To see how wet and dry lab informed the development of our circuit designs, please click <a href="https://2016.igem.org/Team:Oxford/Parts">here</a>.  
+
Issues related to safety (bottom four) were most important to people. We should combat this by focusing our research efforts on ways to stop our bacteria surviving outside the body and way to stop the treatment if it was having undesired affects. There were considered in our safety flowchart.
 +
Unknown long term effects are a concern to people so we should aim to minimise the use of risky techniques and educate people about the benefits this technology can provide in addition to allowing balanced discussion of the possible risks the technology could create. The same attitude applies for the concerns about God and unnatural methods. We should acknowledge that these are problems where people have legitimate fears and concerns and we should approach these concerns carefully and not dismiss them while bringing in a broader discussion on the potential benefits of synthetic biology.</p>
 +
<p>
 +
The statements given as examples tended to be popular but we had no way of telling whether they would have been popular if unprompted – we should possibly have made this question a free, unprompted choice as we believe the question could still be understood without prompts.
 +
The number of responses for each point is dependent on how general the categories are, as we couldn't get the subtleties of individual answers onto a chart we had to group them together rather broadly to see which issues are the most pressing which involves making very subjective decisions in the interpretation of answers.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/b/bd/T--Oxford--3.4.jpg">
 
</section>
 
</section>
 +
<section id="3q5">
 +
<h3>Why would you (or why do you think other people would) be against the use of these bacteria in a medical treatment?</h3>
 +
<p>
 +
Bacteria are perceived as pathogens so using them as a medical treatment seems counter-intuitive and people are not comfortable with willingly exposing themselves to bacteria. There is a sense that people are misinformed about GMOs and bacteria, so with more education both of these problems could be addressed.  We will do this via our summer schools and social media presence. Unknown consequences and the lack of previous success are also issues. We could argue that we can only find the answers to these questions by investigating the treatment, or that the potential benefits of our project should outweigh the theoretical, unspecified disadvantages. There are still environmental and safety concerns, but the ethical and religious issues don’t seem to apply here, perhaps because this is specified as a medical treatment. If we think this is the case we should really emphasise the medical application of this technology, and specifically our project, if we want to ensure the widest support for what we’re doing.
 +
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/6/64/T--Oxford--3.5.jpg">
 
</section>
 
</section>
 
+
<section id="Results3">
<section id="Gut-survival">
+
<h3>Results</h3>
<h2>Gut Survival</h2>
+
 
<p>
 
<p>
Once we had decided that our goal was to produce a long term probiotic treatment, we spoke to a Professor of Evolutionary Biology, Kevin Foster, to discuss how we could increase the likelihood of our bacteria being able to survive in the gut. He raised concerns over our choice of bacterial chassis and advised us to consider the distribution of different bacterial species throughout the small intestine. He also spoke to us about the possibility of using colicins, on which he has carried out significant research, to make our bacteria more competitive. Along with the desire of patients to take a treatment with fewer side effects, this contributed to our decision to propose <i>E. coli</i> K-12 Nissle 1917 as our final chassis. This non-pathogenic strain naturally produces colicins, allowing it to successfully compete with pathogenic strains in the small intestine (3).
+
This survey shows us that we need to consider safety – all aspects of safety including environmental, patient and mutation risk safety. This is addressed in our safety flow chart.
 +
Unknown consequences should be considered, and although there will always be the possibility of these occurring we can take steps to minimise them and emphasise how the benefits of the treatment should outweigh them if implemented carefully. This is the same for unnatural and religious based arguments, we should acknowledge that these are potential issues and address them. However these views were not as widely held as we expected. To get people to be in favour of using bacteria as a medical treatment we will have to work hard to convince people that bacteria can be safe and useful rather than just a pathogen.
 
</p>
 
</p>
 
</section>
 
</section>
<section id="Public-Outreach">
+
</section>
<h2>Public and Legal Outreach</h2>
+
 
 +
<section id="Suv4">
 +
<h2>Fourth Survey</h2>
 
<p>
 
<p>
Having established our goal, we had 2 concerns: we wanted to see whether it would actually be accepted by the public, and whether current policy would affect the development of probiotic therapeutics for human use. To address this first concern, we returned to patients and the public, asking them whether they would take a probiotic therapeutic if recommended by their doctor. The majority responded that they would be willing to. To address our second concern, we spoke to Jane Kaye, Professor of Health, Law and Policy, and Director of HeLEX (Centre for Health, Law and Emerging Technologies). She explained that due to the lack of expertise relevant to synthetic biology in the government, and the fast rate at which new knowledge is being acquired, current policy is very vague. She also said that, with regards to new treatments, policy is very dependent on public opinion of emerging technologies. Armed with this information, we questioned the public on their concerns related to genetically modified bacteria and why they thought people may oppose their use as a therapeutic. The responses we received from this survey acted as a springboard for our ethics research, which we hope addresses much of the concerns that were raised. In addition, this meeting guided much of our safety research, and inspired our initial promoter design of a logic gate based system, relying on 3 inputs. Unfortunately, due to the short-term nature of this project, this was overly ambitious and we redesigned our system and decided to investigate variations of copper-sensitive promoters alone.  
+
This survey was designed to investigate the preferred delivery methods for our treatment and the dosage frequency people would tolerate. This information was used to decide how to deliver our probiotic and to clarify whether people would prefer a permanent population in the small intestine or more frequent applications. This survey was performed in collaboration with iGEM Vilnius so that we can compare the results between the two different countries and see how opinions differ internationally.  
 
</p>
 
</p>
 +
<section id="4q1">
 +
<h3>Are you a Wilson's Disease patient?</h3>
 
<p>
 
<p>
Having finalised our system design: copper-chelators under the control of a copper-sensitive promoter, we decided to investigate how we might deliver this system to the small intestine of the patient. We firstly carried out a literature review, investigating the different ways in which probiotic bacteria can be delivered. These included the use of food products, in addition to pharmaceutical methods (4). We then surveyed both patients of Wilson’s Disease and the general public over their preferred method of delivery. The response was in favour of a pharmaceutical method, as opposed to a non-pharmaceutical mode of delivery, with people preferring a pill or bead to other options. Building on this response, and also the work done by both of the previous Oxford iGEM teams, we decided to investigate the use of a bead for bacterial delivery. We have collected some promising preliminary data regarding this topic, using alginate beads that have been alternately coated in layers of alginate and chitosan (5), but this work is still in progress.
+
We added this question about Wilson’s disease after we made the survey but before posting it on the Wilson’s Disease Support group Facebook page. We will assume that the people who didn’t answer this question do not have Wilson’s disease as the chance of someone with Wilson’s disease finding the survey and filling it in are very small. 21 respondents had Wilson’s disease, 16 respondents definitely did not and 40 respondents answered before we added this question but we assume they did not have Wilson’s disease either, making 56 overall.
 +
Vilnius did not ask this as they are working on phenylketonuria rather than Wilson’s disease.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/b/bc/T--Oxford--4.1.jpg">
 +
</section>
 +
<section id="4q2">
 +
<h3>Have you ever taken a probiotic treatment and, if so, did it have any effect?</h3>
 
<p>
 
<p>
We have also integrated patient concerns into our outreach activities, as the patients we spoke to expressed a disappointment at the lack of public knowledge of Wilson’s Disease. Lack of awareness of the disease can lead to discrimination, for example, some patients expressed the unwillingness of employers to hire people with the disease. When carrying our outreach and engagement activities, and on social media, we took care to raise awareness of the disease wherever possible. This included talking on a country radio station about synthetic biology and Wilson’s Disease, writing an article for Bang! magazine about the disease and our project, promoting awareness on social media and our blog, raising money for the Wilson’s Disease Support Group through a cake sale, and discussing rare diseases at our summer schools events.
+
In the UK the proportion of people who hadn’t tried a probiotic treatment was greater than those who had; in Lithuania the opposite is true. We believe these sort of treatments are more common in Lithuania that in the UK. Although we explained what a probiotic is this lack of familiarity may have stopped UK respondents recognising that this applies to food products.
 +
Of those who had tried a probiotic treatment, in all the large groups, more people said that they had no effect on their health than a positive effect, suggesting many people would be sceptical of using probiotics as a medical treatment. If the project were to be taken forward we would want to peform marketing to improve the image of probiotics so people would be more willing to take them.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/c/c2/T--Oxford--4.2.jpg">
 
</section>
 
</section>
<section id="References">
+
<section id="4q3">
<h3>REFERENCES</h3>
+
<h3>In general, how would you prefer to take a probiotic treatment?</h3>
 
<p>
 
<p>
(1). Grasedyck, K. (1988) ‘D-penicillamine--side effects, pathogenesis and decreasing the risks’,Zeitschrift für Rheumatologie, 47(Supplement 1: 17-9).
+
Consumable products are less popular in all groups than pharmaceutical products which suggests this is how we should plan to deliver our treatment. This is convenient because we can’t make food in our lab, controlling the dose is easier and people won’t get bored of having to take a certain type of food repeatedly and decline to take it. Pharmaceutical products may be more trusted or deemed more appropriate for treating a serious condition. Higher proportion of people in Lithuania would take the consumable product than the UK which we think is due to these sorts of products being more widespread in Lithuania. We discussed this with the team in Vilnius.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/4/47/T--Oxford--4.3.jpg">
 +
</section>
 +
<section id="4q4">
 +
<h3>Of the options listed below, which would be your preferred pharmaceutical delivery method?</h3>
 
<p>
 
<p>
(2). Frequently asked questions (no date) Available at: http://www.trientine.com/frequently-asked-questions/#faq9 (Accessed: 8 April 2016).
+
The UK results show that a gel-like bead or a tablet/pill are the most popular options. We decided to research a gel-like bead as this builds on work done by previous Oxford iGEM teams. Results from both countries show tablet or pill is the most popular but these are also the most familiar. It’s likely that people did’t really know what a gel-like bead would be meaning that we should inform them of this when explaining our project.  
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/d3/T--Oxford--4.4.jpg">
 +
</section>
 +
<section id="4q5">
 +
<h3>Would you prefer to take a probiotic treatment regularly or a single treatment that creates a permanent population of bacteria in the gut (meaning that no further treatment would be required)?</h3>
 
<p>
 
<p>
(3). Hancock, V., Dahl, M. and Klemm, P. (2010) ‘Probiotic Escherichia coli strain Nissle 1917 outcompetes intestinal pathogens during biofilm formation’, Journal of Medical Microbiology, 59(4), pp. 392–399. doi: 10.1099/jmm.0.008672-0.
+
The majority of people want a single treatment so if this were feasible we should try to develop this. This could reduce the problems with storing the pills or beads as they would only need to be taken once so would not need to be stored in the home. We would need to ensure however that our bacteria could compete and survive in the human intestine otherwise a single treatment would be ineffective. We would need a control mechanism to kill the bacteria once they are outside the body regardless of whether it is a single or a regular treatment.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/d/d9/T--Oxford--4.5.jpg">
 +
</section>
 +
<section id="4q6">
 +
<h3>Ideally, how often would you prefer to take a probiotic treatment? (Select all that apply.)</h3>
 
<p>
 
<p>
(4). Govender, M., Choonara, Y.E., Kumar, P., du Toit, L.C., van Vuuren, S. and Pillay, V. (2013) ‘A review of the advancements in Probiotic delivery: Conventional vs. Non-conventional formulations for intestinal flora Supplementation’, AAPS PharmSciTech, 15(1), pp. 29–43. doi: 10.1208/s12249-013-0027-1.
+
Overall slightly more people would prefer to take the pill once a day than once ever, but Wilson’s patients are more likely to want a pill once ever than once a day. As these are people who know what it’s like to take a pill every day and would benefit most from our treatment this is another reason to develop a more long lasting treatment. This complements a question in the second survey we performed, in which we found that the majority of people who expressed a preference would prefer to take a single pill than a pill once a day.
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/7/70/T--Oxford--4.6.jpg">
 +
</section>
 +
<section id="4q7">
 +
<h3>If this were not possible, how often would you be prepared to take a probiotic treatment? (Select all that apply.)</h3>
 
<p>
 
<p>
(5). Cook, M.T., Tzortzis, G., Khutoryanskiy, V.V. and Charalampopoulos, D. (2013) ‘Layer-by-layer coating of alginate matrices with chitosan–alginate for the improved survival and targeted delivery of probiotic bacteria after oral administration’, J. Mater. Chem. B, 1(1), pp. 52–60. doi: 10.1039/c2tb00126h.
+
A daily pill appears to be acceptable to most people, so if we were unable to make a sustainable probiotic population, this would be an alternative we should investigate. People would be prepared to take it more than once a day if necessary so we if we found that the amount of bacteria we need to turnover is too high to take just once a day, our probiotic would still be acceptable if taken more frequently. Ideally we would like to create a population with some ability to persist so that our treatment is improved, at least in regards to dosage frequency, over the existing treatments for Wilson’s disease which have to be taken multiple times a day.  
 
</p>
 
</p>
 +
<img src="https://static.igem.org/mediawiki/2016/a/a1/T--Oxford--4.7.jpg">
 
</section>
 
</section>
 +
<section id="Results4">
 +
<h3>Results</h3>
 +
<p>
 +
From this survey we have found that probiotic treatments are not widely taken in the UK but results from Lithuania suggest they may be more common in other countries. We might need to raise more awareness of them if we were to develop this into an actual product rather than a proof of concept. We should investigate a pharmaceutical delivery method rather than a consumable product delivery method. We decided to investigate delivery via a gel-like bead because this was one of the most popular options in the UK and it is feasible for us to achieve. A single treatment is more popular than a regular treatment. If we were to re-run this survey in the future we should prevent people from giving more than one answer as this makes the results very hard to interpret. If necessary people would be willing take a pill once a day, so if we find we couldn't make a population that persist in the small intestine, our probiotic may still have value.
 +
</p>
 +
</section>
 +
</section>
 +
 
</div>
 
</div>
 
</div>
 
</div>

Latest revision as of 22:14, 19 October 2016

iGEM Oxford 2016 - Cure for Copper

Surveys

Introduction

Engaging with the public was a key part of our project in order to ensure that the results of the project were of benefit and acceptable to all. In order to do this we carried out surveys with members of the public at strategic points to guide the project in the best direction.

First Survey

We carried out our first survey before Christmas to investigate the issues people would like to be addressed by an interdisciplinary science project. When combined with our teams skills this guided the overall direction of our project down the iGEM therapeutic track.

Do you think that synthetic biology can contribute towards the solution of serious global challenges?

All of our respondents thought that synthetic biology could contribute to serious global challenges which reassured us that the outcome of our synthetic biology project would be useful, and that this is an area of science that the public have faith in.

What area would you like a project of this sort to focus on?

We found that the majority of people questioned favoured medical treatments as their preferred area of research. This question was a free answer although the question prompted some answers: "For example: diagnostics, energy, environment, food and nutrition, information processing, manufacturing, therapeutics etc." This may have had an impact on what people chose, but out of the different iGEM tracks available medical and therapeutic purposes were the most preferred.

What specific problem would you like to have solved by an interdisciplinary, synthetic biology-based project?

This was a unprompted, free answer question and gave us answers such as Malaria, treatment of the common cold and asthma treatment. Many were quite vague and not feasible for us to solve in one summer, but one person suggested probiotic supplements which got us interested in using probiotics as a treatment for diseases in general.

Results

This survey was designed to give us some idea as to the direction our project should take. Based on this we decided to investigate the use of bacteria as a medical treatment.

Second Survey

In this survey we aimed to investigate the public’s awareness of scientific issues that arise from our project to establish the areas we need to focus on in our outreach activities, assess the level of support our project might have if it were to be used as a treatment in the future and to get an initial idea of whether people would prefer a single or repetaed treatment plan which effected the designs of our genetic circuit.

How old are you?

We found that we had an uneven spread of age groups among our respondents with a heavy bias towards under 21s. This is probably because the survey was shared via Facebook which has a lot of younger users, and shared particularly among our friends who we requested fill it in. In addition a lot of our friends aged under 21 are doing biology-related degrees at university so their knowledge may not be representative of their age group as a whole. We decided to split the results into under 21 and over 21 as the older groups were so sparsely populated there was little advantage in distinguishing between them.

Had you heard of genetic engineering before this survey?

We found that 90% people surveyed have heard of genetic engineering before this survey and we concluded that informing about genetic engineering shouldn't be our priority in our outreach activities.

Had you heard of synthetic biology before this questionnaire?

Only a small majority overall have heard of synthetic biology so we concluded it would be worth performing some outreach projects to make people more aware of synthetic biology so they can be more informed and engaged in our project. A majority of older people had not heard of synthetic biology before so ideally it this is the age group where we would be focussing our efforts. We concluded that we should target our outreach to more established forms of communication such as radio rather than focusing on just social media which has a much younger demographic.

Have you heard of Orphan Diseases (e.g. Wilson’s Disease)?

Our results showed that Orphan diseases need greater awareness as most people haven’t heard of them. When awareness of rare disease is low amongst both the public and medical professionals, patients of these diseases are less likely to get a correct diagnosis. Public awareness also affects the research allocation to rare diseases which are often underfunded.

If your doctor recommended the use of genetically engineered bacteria to treat an illness, would you use it?

Already a majority of people said they would use a genetically engineered bacteria as a treatment and a third of people didn’t know. If they were given more information about the treatment they might be persuaded to accept it so we should aim to do inform about the nature of our bacteria as we work on our project. Is the decision to take a treatment largely due to a doctor's recommendation or are other people making the decision for themselves from their own knowledge of synthetic biology? We found that a larger proportion of younger people prepared to take a probiotic treatment and previously a greater number of these people had heard of genetic engineering, suggesting this decision is linked to knowledge levels. this does not however account for the fact that attitudes to medical advice varies between age groups.

If you were given the option between taking a daily pill for an extended period of time, or a single probiotic bacterial pill to treat an illness, which would you choose?

A single pill is preferable to a daily pill for the majority of respondents, however our results show that most people would follow their doctor’s recommendation. This suggests in previous question that many of the responses in favour of such a treatment are in large part guided by the doctor's recommendation. We could do another survey to clarify this by repeating the question without giving them the option of allowing a doctor to choose for them. This question highlights how important it is to inform doctors not just patients of our treatment as their input would be required to make our treatment widely acceptable. We decided that we should discuss our treatment with doctors to get their opinions and work out what we would have to do to convince them that our probiotic is safe.

Results

In conclusion, the majority of people have heard of genetic engineering and synthetic biology. If we were to raise awareness of these issues then we should focus on older people rather than younger people, although there is benefit in talking to as many people as possible. Most people have not heard of orphan diseases so raising awareness of these should be a priority and we will try to do this. We found that people were wiling to follow what their doctors recommended so we should ensure that doctors are informed of our treatments, rather than just focusing on the view of patients. We should do another survey to clarify whether a single or daily dose is preferable, and maybe remove the reference to doctor's recommendation as this might be influencing people’s responses.

Third Survey

This survey was designed to investigate the ethical issues people might have with our project so we can respond to these and try and minimise these concerns through the design of project or generate counter arguments.

How old are you?

This time we had fewer responses than before and some groups have no people in them at all. Therefore we will split responses into under and over 21 like before. We think the reasons for this age spread are the same as those seen in survey 1 but older groups are even less represented in this survey because there are fewer responses overall.

Do you understand the term 'genetically-engineered bacteria'?

We covered this topic in the previous survey and received more responses in that. We will not analyse the data from this question therefore due to the smaller sample size.

If your doctor recommended the use of genetically-engineered bacteria to treat an illness, would you use it?

Again this question was better covered in the previous survey.

What do you think people's concerns are about the use of genetically-engineered bacteria (e.g., releasing genetically engineered bacteria into the environment, safety for the patient, "playing God", unjust or unnatural etc.)?

Issues related to safety (bottom four) were most important to people. We should combat this by focusing our research efforts on ways to stop our bacteria surviving outside the body and way to stop the treatment if it was having undesired affects. There were considered in our safety flowchart. Unknown long term effects are a concern to people so we should aim to minimise the use of risky techniques and educate people about the benefits this technology can provide in addition to allowing balanced discussion of the possible risks the technology could create. The same attitude applies for the concerns about God and unnatural methods. We should acknowledge that these are problems where people have legitimate fears and concerns and we should approach these concerns carefully and not dismiss them while bringing in a broader discussion on the potential benefits of synthetic biology.

The statements given as examples tended to be popular but we had no way of telling whether they would have been popular if unprompted – we should possibly have made this question a free, unprompted choice as we believe the question could still be understood without prompts. The number of responses for each point is dependent on how general the categories are, as we couldn't get the subtleties of individual answers onto a chart we had to group them together rather broadly to see which issues are the most pressing which involves making very subjective decisions in the interpretation of answers.

Why would you (or why do you think other people would) be against the use of these bacteria in a medical treatment?

Bacteria are perceived as pathogens so using them as a medical treatment seems counter-intuitive and people are not comfortable with willingly exposing themselves to bacteria. There is a sense that people are misinformed about GMOs and bacteria, so with more education both of these problems could be addressed. We will do this via our summer schools and social media presence. Unknown consequences and the lack of previous success are also issues. We could argue that we can only find the answers to these questions by investigating the treatment, or that the potential benefits of our project should outweigh the theoretical, unspecified disadvantages. There are still environmental and safety concerns, but the ethical and religious issues don’t seem to apply here, perhaps because this is specified as a medical treatment. If we think this is the case we should really emphasise the medical application of this technology, and specifically our project, if we want to ensure the widest support for what we’re doing.

Results

This survey shows us that we need to consider safety – all aspects of safety including environmental, patient and mutation risk safety. This is addressed in our safety flow chart. Unknown consequences should be considered, and although there will always be the possibility of these occurring we can take steps to minimise them and emphasise how the benefits of the treatment should outweigh them if implemented carefully. This is the same for unnatural and religious based arguments, we should acknowledge that these are potential issues and address them. However these views were not as widely held as we expected. To get people to be in favour of using bacteria as a medical treatment we will have to work hard to convince people that bacteria can be safe and useful rather than just a pathogen.

Fourth Survey

This survey was designed to investigate the preferred delivery methods for our treatment and the dosage frequency people would tolerate. This information was used to decide how to deliver our probiotic and to clarify whether people would prefer a permanent population in the small intestine or more frequent applications. This survey was performed in collaboration with iGEM Vilnius so that we can compare the results between the two different countries and see how opinions differ internationally.

Are you a Wilson's Disease patient?

We added this question about Wilson’s disease after we made the survey but before posting it on the Wilson’s Disease Support group Facebook page. We will assume that the people who didn’t answer this question do not have Wilson’s disease as the chance of someone with Wilson’s disease finding the survey and filling it in are very small. 21 respondents had Wilson’s disease, 16 respondents definitely did not and 40 respondents answered before we added this question but we assume they did not have Wilson’s disease either, making 56 overall. Vilnius did not ask this as they are working on phenylketonuria rather than Wilson’s disease.

Have you ever taken a probiotic treatment and, if so, did it have any effect?

In the UK the proportion of people who hadn’t tried a probiotic treatment was greater than those who had; in Lithuania the opposite is true. We believe these sort of treatments are more common in Lithuania that in the UK. Although we explained what a probiotic is this lack of familiarity may have stopped UK respondents recognising that this applies to food products. Of those who had tried a probiotic treatment, in all the large groups, more people said that they had no effect on their health than a positive effect, suggesting many people would be sceptical of using probiotics as a medical treatment. If the project were to be taken forward we would want to peform marketing to improve the image of probiotics so people would be more willing to take them.

In general, how would you prefer to take a probiotic treatment?

Consumable products are less popular in all groups than pharmaceutical products which suggests this is how we should plan to deliver our treatment. This is convenient because we can’t make food in our lab, controlling the dose is easier and people won’t get bored of having to take a certain type of food repeatedly and decline to take it. Pharmaceutical products may be more trusted or deemed more appropriate for treating a serious condition. Higher proportion of people in Lithuania would take the consumable product than the UK which we think is due to these sorts of products being more widespread in Lithuania. We discussed this with the team in Vilnius.

Of the options listed below, which would be your preferred pharmaceutical delivery method?

The UK results show that a gel-like bead or a tablet/pill are the most popular options. We decided to research a gel-like bead as this builds on work done by previous Oxford iGEM teams. Results from both countries show tablet or pill is the most popular but these are also the most familiar. It’s likely that people did’t really know what a gel-like bead would be meaning that we should inform them of this when explaining our project.

Would you prefer to take a probiotic treatment regularly or a single treatment that creates a permanent population of bacteria in the gut (meaning that no further treatment would be required)?

The majority of people want a single treatment so if this were feasible we should try to develop this. This could reduce the problems with storing the pills or beads as they would only need to be taken once so would not need to be stored in the home. We would need to ensure however that our bacteria could compete and survive in the human intestine otherwise a single treatment would be ineffective. We would need a control mechanism to kill the bacteria once they are outside the body regardless of whether it is a single or a regular treatment.

Ideally, how often would you prefer to take a probiotic treatment? (Select all that apply.)

Overall slightly more people would prefer to take the pill once a day than once ever, but Wilson’s patients are more likely to want a pill once ever than once a day. As these are people who know what it’s like to take a pill every day and would benefit most from our treatment this is another reason to develop a more long lasting treatment. This complements a question in the second survey we performed, in which we found that the majority of people who expressed a preference would prefer to take a single pill than a pill once a day.

If this were not possible, how often would you be prepared to take a probiotic treatment? (Select all that apply.)

A daily pill appears to be acceptable to most people, so if we were unable to make a sustainable probiotic population, this would be an alternative we should investigate. People would be prepared to take it more than once a day if necessary so we if we found that the amount of bacteria we need to turnover is too high to take just once a day, our probiotic would still be acceptable if taken more frequently. Ideally we would like to create a population with some ability to persist so that our treatment is improved, at least in regards to dosage frequency, over the existing treatments for Wilson’s disease which have to be taken multiple times a day.

Results

From this survey we have found that probiotic treatments are not widely taken in the UK but results from Lithuania suggest they may be more common in other countries. We might need to raise more awareness of them if we were to develop this into an actual product rather than a proof of concept. We should investigate a pharmaceutical delivery method rather than a consumable product delivery method. We decided to investigate delivery via a gel-like bead because this was one of the most popular options in the UK and it is feasible for us to achieve. A single treatment is more popular than a regular treatment. If we were to re-run this survey in the future we should prevent people from giving more than one answer as this makes the results very hard to interpret. If necessary people would be willing take a pill once a day, so if we find we couldn't make a population that persist in the small intestine, our probiotic may still have value.