Difference between revisions of "Team:William and Mary"

 
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{{Team:William_and_Mary/CSS_RESET}}
 
{{Team:William_and_Mary/CSS_RESET}}
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{{Team:William_and_Mary/CSS_FIX}}
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{{Team:William_and_Mary/SOURCE}}
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{{Team:William_and_Mary/HEADER}}
  
 
<html lang="en">
 
<html lang="en">
 
<cfheader name="X-XSS-Protection" value="1">
 
<cfheader name="X-XSS-Protection" value="1">
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    <head>
 
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        <meta charset="utf-8" />
 
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        <!--link rel="icon" type="image/png" href="assets/img/favicon.ico"-->
 
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        <meta http-equiv="X-UA-Compatible" content="IE=edge,chrome=1" />
 
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        <!--title>William & Mary</title-->
 
−
        <meta content='width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=0' name='viewport' />
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/bootstrap?action=raw&amp;ctype=text/css" rel="stylesheet" />
 
−
<link href="https://2016.igem.org/Team:William_and_Mary/fixbootstrap?action=raw&amp;ctype=text/css" rel="stylesheet" type="text/css"/>
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/rubik?action=raw&amp;ctype=text/css" rel="stylesheet"/>
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/demo?action=raw&amp;ctype=text/css" rel="stylesheet"/>
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/jsquerybxslidercss?action=raw&amp;ctype=text/css" rel="stylesheet"/>
 
−
 
−
        <!--    Fonts and icons    -->
 
−
        <link href="http://maxcdn.bootstrapcdn.com/font-awesome/4.2.0/css/font-awesome.min.css" rel="stylesheet"/>
 
−
        <link href='https://2016.igem.org/Team:William_and_Mary/droid-serif?action=raw&amp;ctype=text/css' rel='stylesheet' type='text/css'/>
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/pe-icon-7stroke?action=raw&amp;ctype=text/css" rel="stylesheet"/>
 
−
        <link href="https://2016.igem.org/Team:William_and_Mary/Rubik-Fonts?action=raw&amp;ctype=text/css" rel="stylesheet" />
 
−
       
 
−
<!-- the wiki settings in the section immediately below are from UC San Diego 2015 -->
 
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<!-- fixed by J-Mitch of W&M -->
 
  
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<style type="text/css">
 
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/* WIKI SETTINGS*/
 
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/* Hide first heading */
 
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.firstHeading {
 
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display: none;
 
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}
 
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/* Visited hyperlinks */
 
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a:visited{
 
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color: #393d31;
 
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}
 
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/*-- Remove borders, float content left and remove padding/margin */
 
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#globalWrapper, #content{
 
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background-color: transparent;
 
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border: none;
 
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float: center;
 
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                                width: 100.15%; /* found to be the magic number (: */
 
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margin-left: -3px;
 
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margin-top: -8px;
 
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padding: auto;
 
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}
 
−
 
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/*left align Black Menu Bar */
 
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#top_menu_inside {
 
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margin-left: 0px;
 
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}
 
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.centerImage
 
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{
 
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text-align:center;
 
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display:block;
 
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}
 
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.wraptocenter {
 
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  display: table-cell;
 
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  text-align: center;
 
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  vertical-align: middle;
 
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  width: 200px;
 
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  height: 200px;
 
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  background-color: #999;
 
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}
 
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.wraptocenter * {
 
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  vertical-align: middle;
 
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}
 
−
</style>
 
−
 
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    </head>
 
 
     <body class="landing-page">
 
     <body class="landing-page">
−
<!--
 
−
        <div class="loading ">
 
−
            <div class="loading-container">
 
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                <p>loading...</p>
 
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                <img class="loader" src="assets/img/rubik.svg"/>
 
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            </div>
 
−
        </div>
 
−
-->
 
−
        <nav class="navbar navbar-default navbar-transparent navbar-fixed-top" role="navigation">
 
−
            <!-- if you want to keep the navbar hidden you can add this class to the navbar "navbar-burger"-->
 
−
            <div class="container">
 
−
                <div class="navbar-header">
 
−
                    <button id="menu-toggle" type="button" class="navbar-toggle" data-toggle="collapse" data-target="#example">
 
−
                    <span class="sr-only">Toggle navigation</span>
 
−
                    <span class="icon-bar bar1"></span>
 
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                    <span class="icon-bar bar2"></span>
 
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                    <span class="icon-bar bar3"></span>
 
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                    </button>
 
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                    <a class="navbar-brand">
 
−
                    William & Mary
 
−
                    </a>
 
−
                </div>
 
−
                <div class="collapse navbar-collapse">
 
−
                    <ul class="nav navbar-nav navbar-right navbar-uppercase">
 
−
                        <li class="social-links">
 
−
                            <a href="https://www.facebook.com/WMiGEM16/?fref=ts">
 
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                            <i class="fa fa-facebook"></i>
 
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                            </a>
 
−
                            <a href="https://twitter.com/wmigem">
 
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                            <i class="fa fa-twitter"></i>
 
−
</a>
 
−
<!--
 
−
                            <a href="#">
 
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                            <i class="fa fa-instagram"></i>
 
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                            </a>
 
−
-->
 
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                        </li>
 
−
                        <li>
 
−
                            <a href="template.html">
 
−
                            Overview
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="description.html">
 
−
                            Description
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="" data-scroll="true" data-id="#projects">
 
−
                            Parts
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="" data-scroll="true" data-id="#clients">
 
−
                            Results
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="" data-scroll="true" data-id="#team">
 
−
                            Modeling
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="" data-scroll="true" data-id="#numbers">
 
−
                            Collaboration
 
−
                            </a>
 
−
                        </li>
 
−
                        <li>
 
−
                            <a href="" data-scroll="true" data-id="#contact">
 
−
                            Team
 
−
                            </a>
 
−
                        </li>
 
−
                    </ul>
 
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                </div>
 
−
            </div>
 
−
        </nav>
 
−
       
 
−
       
 
−
       
 
−
       
 
−
       
 
−
       
 
 
         <div class="wrapper">
 
         <div class="wrapper">
 
          
 
          
 
<!--PRESENTATION PAGE INFORMATION BEGINS HERE-->
 
<!--PRESENTATION PAGE INFORMATION BEGINS HERE-->
 +
<!--all source files, header, footer, and CSS resets are now in templates
 +
above and below the html source code on this page.  This serves to make
 +
easier the construction of new pages that can be linked to from this
 +
general overview presentation page.
 +
-J-Mitch
 +
-->
  
 
<div class="section section-header" id="overview">
 
<div class="section section-header" id="overview">
 
<div class="parallax pattern-image filter filter-gradient-purple" data-color="gold">
 
<div class="parallax pattern-image filter filter-gradient-purple" data-color="gold">
−
<img alt="..." src="https://static.igem.org/mediawiki/2016/c/ce/T--William_and_Mary--rubik-background.jpg">
+
<!--img alt="..." src="https://static.igem.org/mediawiki/2016/c/ce/T--William_and_Mary--rubik-background.jpg"-->
 +
<img alt="..." src='https://static.igem.org/mediawiki/2016/0/07/T--William_and_Mary--circuit_background.jpeg'>
 
<div class="container">
 
<div class="container">
 
<div class="content">
 
<div class="content">
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</div>
 
</div>
  
−
      <div class="section section-we-are-2" id="description">
+
  <div class="section section-we-are-2" id="description" style='padding-bottom: 0px !important;'>
−
          <div class="text-area">
+
  <div class="text-area">
−
              <div class="container">
+
  <div class="container">
−
                  <div class="row">
+
  <div class="row">
−
                      <div class="col-md-4">
+
  <div class="col-md-4">
−
                          <div class="title add-animation-stopped">
+
  <div class="title add-animation-stopped">
−
                              <p class="h2WM">Project Description</p>
+
  <p class="h2WM">The Toolbox</p>
−
                              <div class="separator-container">
+
  <div class="separator-container">
−
                                  <!--div class="separator line-separator">✻</div-->
+
  <!--div class="separator line-separator">✻</div-->
−
                              </div>
+
  </div>
−
                          </div>
+
  </div>
−
                      </div>
+
  </div>
−
                      <div class="col-md-7 col-md-offset-1">
+
  <div class="col-md-7 col-md-offset-1">
−
                          <div class="description add-animation-stopped animation-1">
+
  <div class="description add-animation-stopped animation-1">
−
                              <p class="large">
+
  <p class="large">
−
  Here we will put the description of our project. This is only
+
  Our project aims to provide a modular collection of genetic parts which can specifically and predictably tune the  
−
  a short summary - the whole overview will go on the description
+
  behavior of an arbitrary genetic circuit. This collection, which we have dubbed the “Circuit Control Toolbox,”
−
  page.  We will link to that page here and at the top in the navbar.
+
  consists of a suite of parts which can be added to the end of a given genetic circuit; each part provides a specific
−
  </p>
+
  and independently tunable response which allows direct control over the ultimate output behavior of the circuit.
−
  <p class="large">
+
  </p>
−
  More paragraphs can be made here, if necessary.
+
  <p class="large">
−
  </p>
+
  You can view our project description page <a href='https://2016.igem.org/Team:William_and_Mary/Description'>here</a>.
−
                          </div>
+
  </p>
−
                      </div>
+
  </div>
−
                  </div>
+
  </div>
−
              </div>
+
  </div>
−
          </div>
+
  </div>
−
          <div class="container">
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  </div>
−
              <div class="row">
+
  </div>
−
                  <div class="col-md-10 col-md-offset-1">
+
 
−
                      <div class="row">
+
  <!-- Section "What We do" example 4: Big Title & 4 columns icons -->
−
                          <div class="col-md-4">
+
  <div class="section section-we-do-2" id="workflow2">
−
                              <div class="card add-animation-stopped animation-1">
+
  <div class="container">
−
                                  <img alt="..." src="https://static.igem.org/mediawiki/2016/6/67/T--William_and_Mary--Carouseldefault.jpeg" />
+
  <div class="row">
−
                              </div>
+
  <div class="col-md-3">
−
                          </div>
+
  <div class="card add-animation-stopped animation-1">
−
                          <div class="col-md-4">
+
  <div class="icon">
−
                              <div class="card add-animation-stopped animation-2">
+
  <a href='https://2016.igem.org/Team:William_and_Mary/RBS'><img src="https://static.igem.org/mediawiki/2016/c/cc/T--William_and_Mary--rbs_icon.png" height= "100" width= "100"></a>
−
                                  <img alt="..." src="https://static.igem.org/mediawiki/2016/6/67/T--William_and_Mary--Carouseldefault.jpeg"/>
+
  </div>
−
                              </div>
+
  <h3>RBS</h3>
−
                          </div>
+
  <p class='large' style='text-align: center !important;'>
−
                          <div class="col-md-4">
+
  RBS Tuning
−
                              <div class="card add-animation-stopped animation-3">
+
  </p>
−
                                  <img alt="..." src="https://static.igem.org/mediawiki/2016/6/67/T--William_and_Mary--Carouseldefault.jpeg"/>
+
  </div>
−
                              </div>
+
  </div>
−
                          </div>
+
  <div class="col-md-3">
−
                      </div>
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  <div class="card add-animation-stopped animation-2">
−
                  </div>
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  <div class="icon">
−
              </div>
+
  <a href='https://2016.igem.org/Team:William_and_Mary/Synthetic_Enhancer'><img src="https://static.igem.org/mediawiki/2016/a/a0/T--William_and_Mary--db_icon.png" height= "100" width= "100"></a>
−
          </div>
+
  </div>
−
      </div>
+
  <h3>Synthetic Enhancer</h3>
 +
  <p class='large' style='text-align: center !important;'>
 +
  Synthetic Enhancer Suite
 +
  </p>
 +
  </div>
 +
  </div>
 +
  <div class="col-md-3">
 +
  <div class="card add-animation-stopped animation-3">
 +
  <div class="icon">
 +
  <a href='https://2016.igem.org/Team:William_and_Mary/RiboJ'><img src="https://static.igem.org/mediawiki/2016/4/44/T--William_and_Mary--riboj_icon.png" height= "100" width= "100"></a>
 +
  </div>
 +
  <h3>RiboJ</h3>
 +
  <p class='large' style='text-align: center !important;'>
 +
  Ribozyme Insulator
 +
  </p>
 +
  </div>
 +
  </div>
 +
  <div class="col-md-3">
 +
  <div class="card add-animation-stopped animation-4">
 +
  <div class="icon">
 +
  <a href='https://2016.igem.org/Team:William_and_Mary/Binding_Array'><img src="https://static.igem.org/mediawiki/2016/2/21/T--William_and_Mary--bba_icon.png" height= "100" width= "100"></a>
 +
  </div>
 +
  <h3>Binding Array</h3>
 +
  <p class='large' style='text-align: center !important;'>
 +
  Decoy Binding Array
 +
  </p>
 +
  </div>
 +
  </div>
 +
  </div>
 +
  </div>
 +
  </div>
 +
  <!-- End Section "What We do" example 3: Small Title & 3 columns icons -->
 +
<!-- END SECTIONS WHAT WE DO -->
  
 
<!-- Section "What We do" example 4: Big Title & 4 columns icons -->
 
<!-- Section "What We do" example 4: Big Title & 4 columns icons -->
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<div class="row">
 
<div class="row">
 
<div class="title">
 
<div class="title">
−
<h2>section 2 title</h2>
+
<p class='h2WM'>
 +
Parts
 +
</p>
 
<div class="separator-container">
 
<div class="separator-container">
 
<div class="separator line-separator">✻</div>
 
<div class="separator line-separator">✻</div>
 
</div>
 
</div>
−
<p>
+
<p class='large' style='text-align: center !important;'>
−
Here is where 4 links can go to other pages, or a description of 4 aspects of the project.
+
This year, we submitted 118 parts to the BioBrick Registry.
 +
</p>
 +
<p class='large' style='text-align: center !important;'>
 +
These are the highlights.
 
</p>
 
</p>
 
</div>
 
</div>
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<div class="card">
 
<div class="card">
 
<div class="icon">
 
<div class="icon">
−
<i class="pe-7s-piggy"></i>
+
<a href='https://2016.igem.org/Team:William_and_Mary/Basic_Part'><i class="pe-7s-plugin"></i></a>
 
</div>
 
</div>
−
<h3>Thing 1</h3>
+
<h3>Basic Part</h3>
−
<p class='large' style='text-align: center;'>brief description</p>
+
<p class='large' style='text-align: center !important;'>
 +
The 85x tetO array
 +
</p>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="card">
 
<div class="card">
 
<div class="icon">
 
<div class="icon">
−
<i class="pe-7s-headphones"></i>
+
<a href='https://2016.igem.org/Team:William_and_Mary/Composite_Part'><i class="pe-7s-network"></i></a>
 
</div>
 
</div>
−
<h3>Thing 2</h3>
+
<h3>Composite Part</h3>
−
<p>brief description</p>
+
<p class='large' style='text-align: center !important;'>
 +
Two-step synthetic enhancer + NRII mutant
 +
</p>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="card">
 
<div class="card">
 
<div class="icon">
 
<div class="icon">
−
<i class="pe-7s-pen"></i>
+
<a href='https://2016.igem.org/Team:William_and_Mary/Part_Collection'><i class="pe-7s-portfolio"></i></a>
 
</div>
 
</div>
−
<h3>Thing 3</h3>
+
<h3>Part Collection</h3>
−
<p>brief description</p>
+
<p class='large' style='text-align: center !important;'>
 +
The circuit control toolbox
 +
</p>
 
</div>
 
</div>
 
</div>
 
</div>
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<div class="card">
 
<div class="card">
 
<div class="icon">
 
<div class="icon">
−
<i class="pe-7s-plugin"></i>
+
<a href='https://2016.igem.org/Team:William_and_Mary/Parts'><i class="pe-7s-box1"></i></a>
 
</div>
 
</div>
−
<h3>Thing 4</h3>
+
<h3>All Parts</h3>
−
<p>brief description</p>
+
<p class='large' style='text-align: center !important;'>
 +
All the parts we've made this year
 +
</p>
 
</div>
 
</div>
 
</div>
 
</div>
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</div>
 
</div>
 
</div>
 
</div>
−
<!-- End Section "What We do" example 3: Small Title & 3 columns icons -->
+
−
 
+
  <!-- Section "What We do" example 4: Big Title & 4 columns icons -->
−
<!-- Section "Our Projects" example 5: Single Line Photos -->
+
  <div class="section section-we-do-2" id="workflow2">
−
<div class="section section-we-made-2 section-with-hover" id="projects2">
+
  <div class="container">
−
<div class="projects" style="overflow: hidden;">
+
  <div class="row">
−
<div class="text-area">
+
  <div class="title">
−
<div class="title">
+
<p class='h2WM'>
−
<h5 class="text-gray">Example No.5</h5>
+
Achievements
−
<h2>Projects section</h2>
+
</p>
 
<div class="separator-container">
 
<div class="separator-container">
 
<div class="separator line-separator">✻</div>
 
<div class="separator line-separator">✻</div>
 
</div>
 
</div>
 
</div>
 
</div>
−
</div>
+
  <div class="col-md-3">
−
<div class="info">
+
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<p class="text-center text-gray">more project stuff yay</p>
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  <a href='https://2016.igem.org/Team:William_and_Mary/Measurement'><img src="https://static.igem.org/mediawiki/2015/0/0f/WMRulerIconColor.png" height= "100" width= "150"/></a>
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  <a href='https://2016.igem.org/Team:William_and_Mary/Medal_Requirements'><i class="pe-7s-medal"></i></a>
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  <h3>Medal Requirements</h3>
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  <a href='https://2016.igem.org/Team:William_and_Mary/Results'><i class="pe-7s-graph1"></i></a>
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<h4>this is</h4>
+
  <div class="card add-animation-stopped animation-4">
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<p>a really cool website I think</p>
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  <div class="icon">
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  <a href='https://2016.igem.org/Team:William_and_Mary/Interlab'><i class="pe-7s-mail-open-file"></i></a>
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<!--                                      <div class="separator-container">
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                                                <a href="https://2016.igem.org/Team:William_and_Mary/Notebook"><img alt="..." src="https://static.igem.org/mediawiki/2015/a/a6/WMNotebookIconColor.png" height= "100" width= "90"/></a>
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                                            </div>
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                                            <h3>
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 +
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                                            </div>
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                                            <h3>
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                                                <a href="https://2016.igem.org/Team:William_and_Mary/Attributions"> <img alt="..." src="https://static.igem.org/mediawiki/2015/a/aa/WMTUIconColor.png" height= "100" width= "100"/></a>
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                                            </div>
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<a href="https://2015.igem.org/Team:William_and_Mary/Attributions">
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                        <!-- End Section "Numbers" example 2: Text & Image -->
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<div class="separator-container">
 
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−
<i class="fa fa-twitter"></i> <b>Experiment</b>
 
−
Curious what our project is about?  Check out this short video...
 
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−
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−
Looking to collaborate this year?  Sign up for our <b>pen pal</b> program...
 
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<i class="fa fa-facebook-square"></i> Facebook
 
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−
2016 William and Mary iGEM
 
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Latest revision as of 21:20, 1 December 2016

...

Circuit Control

✻
creating a toolbox allowing for precision circuit control

The Toolbox

Our project aims to provide a modular collection of genetic parts which can specifically and predictably tune the behavior of an arbitrary genetic circuit. This collection, which we have dubbed the “Circuit Control Toolbox,” consists of a suite of parts which can be added to the end of a given genetic circuit; each part provides a specific and independently tunable response which allows direct control over the ultimate output behavior of the circuit.

You can view our project description page here.

RBS

RBS Tuning

Synthetic Enhancer

Synthetic Enhancer Suite

RiboJ

Ribozyme Insulator

Binding Array

Decoy Binding Array

Parts

✻

This year, we submitted 118 parts to the BioBrick Registry.

These are the highlights.

Basic Part

The 85x tetO array

Composite Part

Two-step synthetic enhancer + NRII mutant

Part Collection

The circuit control toolbox

All Parts

All the parts we've made this year

Achievements

✻

Measurement

Medal Requirements

Results

Interlab