Difference between revisions of "Team:BostonU HW/CSS"

 
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Line 1: Line 1:
 +
{{Template:BUHW2016_Bootstrap}}
 
<html>
 
<html>
 +
  
  
 
<head>
 
<head>
 
<!-- Latest compiled and minified CSS -->
 
<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.6/css/bootstrap.min.css" integrity="sha384-1q8mTJOASx8j1Au+a5WDVnPi2lkFfwwEAa8hDDdjZlpLegxhjVME1fgjWPGmkzs7" crossorigin="anonymous">
 
 
</head>
 
 
  
 
<style type="text/css">
 
<style type="text/css">
Line 15: Line 11:
  
 
#sideMenu, #top_title {display:none;}
 
#sideMenu, #top_title {display:none;}
#content { padding:0px; width:100%; margin-top:-7px; margin-left:0px;}
+
#content { padding:0px; width:100%; margin-top:-12px; margin-left:0px;}
 
body {background-color:white; }
 
body {background-color:white; }
 
#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5 { margin-bottom: 0px; }
 
#bodyContent h1, #bodyContent h2, #bodyContent h3, #bodyContent h4, #bodyContent h5 { margin-bottom: 0px; }
  
/*!
 
* Start Bootstrap - Stylish Portfolio Bootstrap Theme (http://startbootstrap.com)
 
* Code licensed under the Apache License v2.0.
 
* For details, see http://www.apache.org/licenses/LICENSE-2.0.
 
*/
 
  
/* Global Styles */
+
@font-face {
 +
    font-family: openSans;
 +
    src: url(https://static.igem.org/mediawiki/2016/1/1e/T--BostonU_HW--OpenSansRegular_rcwolf.ttf);
 +
}
 +
 
  
html,
+
html,body
body {
+
{
 
     width: 100%;
 
     width: 100%;
 +
    min-width: 100%;
 
     height: 100%;
 
     height: 100%;
 +
    margin: 0px;
 +
    padding: 0px;
 +
    overflow-x: hidden;
 
}
 
}
  
body {
 
    font-family: "Source Sans Pro","Helvetica Neue",Helvetica,Arial,sans-serif;
 
}
 
  
.text-vertical-center {
+
body{
    display: table-cell;
+
background-color:black;
    text-align: center;
+
    vertical-align: middle;
+
 
}
 
}
  
.text-vertical-center h1 {
+
* {
    margin: 0;
+
font-family: openSans !important;
    padding: 0;
+
    font-size: 4.5em;
+
    font-weight: 700;
+
 
}
 
}
  
/* Custom Button Styles */
 
  
.btn-dark {
+
.navbar {
    border-radius: 0;
+
  background-color: transparent;
    color: #ffffff;
+
  background: transparent;
    background-color: rgba(0,0,0,0.4);
+
  border-color: transparent;
}
+
  margin-top: 10px;
  
.btn-dark:hover,
 
.btn-dark:focus,
 
.btn-dark:active {
 
    border-radius: 0;
 
    color: #ffffff;
 
    background-color: rgba(0,0,0,0.7);
 
 
}
 
}
  
.btn-light {
 
    border-radius: 0;
 
    color: #333;
 
    background-color: rgb(255,255,255);
 
}
 
  
.btn-light:hover,
 
.btn-light:focus,
 
.btn-light:active {
 
    color: #333;
 
    background-color: rgba(255,255,255,0.8);
 
}
 
  
/* Custom Horizontal Rule */
+
.navbar-default .navbar-header .navbar-brand,
 +
.navbar-default .navbar-header .navbar-brand:hover,
 +
.navbar-default .navbar-header .navbar-brand:focus {
 +
      color: white;
 +
  }
 +
  .navbar-default .nav > li > a,
 +
  .navbar-default .nav > li > a:focus {
 +
      color: white;
 +
      font-size: medium;
 +
  }
 +
  .navbar-default .nav > li > a:hover,
 +
  .navbar-default .nav > li > a:focus:hover {
 +
      color: white;
 +
      font-size: medium;
 +
  }
 +
  .navbar-default.affix {
 +
      background-color: white;
 +
      border-color: white;
 +
  }
  
hr.small {
 
    max-width: 100px;
 
    margin: auto;
 
  
}
 
  
/* Side Menu */
 
  
#sidebar-wrapper {
+
.header {
    z-index: 1000;
+
    position: fixed;
+
 
    right: 0;
+
background: url('https://static.igem.org/mediawiki/2016/8/8b/T--BostonU_HW--NeptuneNASA_rcwolf.jpg') no-repeat center center fixed;  
    width: 250px;
+
  -webkit-background-size: cover;
    height: 100%;
+
  -moz-background-size: cover;
    margin-right: -250px;
+
  -o-background-size: cover;
    overflow-y: auto;
+
  background-size: cover;
    background: #222;
+
 
    -webkit-transition: all 0.4s ease 0s;
+
    -moz-transition: all 0.4s ease 0s;
+
    -ms-transition: all 0.4s ease 0s;
+
    -o-transition: all 0.4s ease 0s;
+
    transition: all 0.4s ease 0s;
+
}
+
  
.sidebar-nav {
 
    position: absolute;
 
    top: 0;
 
    width: 250px;
 
    margin: 0;
 
    padding: 0;
 
    list-style: none;
 
 
}
 
}
  
.sidebar-nav li {
+
.ourProject {
    text-indent: 20px;
+
position: relative;
    line-height: 40px;
+
background: url("https://static.igem.org/mediawiki/2016/b/b7/T--BostonU_HW--MFBackground_rcwolf.png");
 +
background-size: 100% 100%;
 +
height: 110%;
 +
width: 100%;
 
}
 
}
  
.sidebar-nav li a {
+
 
    display: block;
+
.noPadding {
    text-decoration: none;
+
  padding: 0 !important;
    color: #999;
+
  margin: 0 !important;
 
}
 
}
  
.sidebar-nav li a:hover {
+
.sectionPadding {
    text-decoration: none;
+
  padding-top: 90px !important;
    color: #fff;
+
  padding-bottom: 90px !important;
    background: rgba(255,255,255,0.2);
+
 
}
 
}
  
.sidebar-nav li a:active,
+
 
.sidebar-nav li a:focus {
+
.pageBranding {
    text-decoration: none;
+
font-size: 67px;
 
}
 
}
  
.sidebar-nav > .sidebar-brand {
+
 
    height: 55px;
+
.headerCaption {
    font-size: 18px;
+
font-size: 130%;
    line-height: 55px;
+
font-weight: 400;
 +
line-height: 130%;
 
}
 
}
  
.sidebar-nav > .sidebar-brand a {
+
 
    color: #999;
+
.headerText {
 +
color: white;
 +
padding-top: 170px;
 
}
 
}
  
.sidebar-nav > .sidebar-brand a:hover {
+
.ourProjectText {
     color: #fff;
+
    margin-top: 100px;
     background: none;
+
    margin-bottom: 100px;
 +
     -webkit-box-shadow: 5px 5px 0px rgba(4, 4, 4, 0.3);
 +
     -moz-box-shadow:   5px 5px 0px rgba(4, 4, 4, 0.3);
 +
    box-shadow:        5px 5px 0px rgba(4, 4, 4, 0.3);
 
}
 
}
  
#menu-toggle {
+
.ourProjectTextBoarder {
    z-index: 1;
+
    margin: 80px;
    position: fixed;
+
    padding:10px;
    top: 0;
+
 
    right: 0;
+
 
 
}
 
}
  
#sidebar-wrapper.active {
+
.contactUs {
    right: 250px;
+
position: relative;
    width: 250px;
+
background-color: black;
    -webkit-transition: all 0.4s ease 0s;
+
background-size: 100% 100%;
    -moz-transition: all 0.4s ease 0s;
+
height: 230px;
    -ms-transition: all 0.4s ease 0s;
+
width: 100%;
    -o-transition: all 0.4s ease 0s;
+
    transition: all 0.4s ease 0s;
+
 
}
 
}
  
.toggle {
+
.contactUsContent {
    margin: 5px 5px 0 0;
+
margin-top: 70px;
 +
font-size: 25px;
 
}
 
}
  
/* Header */
 
  
.header {
 
    display: table;
 
    position: relative;
 
    width: 100%;
 
    height: 100%;
 
    background: url(../img/bg.jpg) no-repeat center center scroll;
 
    -webkit-background-size: cover;
 
    -moz-background-size: cover;
 
    background-size: cover;
 
    -o-background-size: cover;
 
}
 
  
/* About */
 
  
.about {
+
.btn {
     padding: 50px 0;
+
     padding: 14px 24px;
 +
    border: 0 none;
 +
    border-radius: 0;
 +
    font-weight: 700;
 +
    font-size: 20px;
 +
    letter-spacing: 1px;
 +
    text-transform: uppercase;
 +
    -webkit-box-shadow: 5px 5px 0px rgba(4, 4, 4, 0.3);
 +
    -moz-box-shadow:    5px 5px 0px rgba(4, 4, 4, 0.3);
 +
    box-shadow:        5px 5px 0px rgba(4, 4, 4, 0.3);
 +
   
 +
}
 +
 +
.btn:focus, .btn:active:focus, .btn.active:focus {
 +
    outline: 0 none;
 +
}
 +
 +
.btn-primary {
 +
    background: #ffffff;
 +
    color: #000000;
 
}
 
}
  
/* Services */
+
.btn-primary:active, .btn-primary.active {
 +
    background: #ffffff;
 +
    color: #000000;
 +
}
  
.services {
+
     padding: 50px 0;
+
 
 +
.btn-primary:focus {
 +
    background: #ffffff;
 +
     color: #000000;
 
}
 
}
 +
  
.service-item {
+
.btn:active:focus {
     margin-bottom: 30px;
+
     background: #545454 !important;
 +
    color: white;
 +
    box-shadow: none;
 +
}
 +
.btn-primary:hover{
 +
    background: #545454;
 +
    color: white;
 
}
 
}
  
/* Callout */
 
  
.callout {
+
 
    display: table;
+
 
    width: 100%;
+
 
    height: 400px;
+
 
    color: #fff;
+
 
    background: url(../img/callout.jpg) no-repeat center center scroll;
+
 
    -webkit-background-size: cover;
+
/*  Animated Underlining For Menu Items  */
    -moz-background-size: cover;
+
.dropbtn {
    background-size: cover;
+
display: inline-block;
    -o-background-size: cover;
+
position: relative;
 +
padding-bottom: 3px;
 
}
 
}
 +
.dropbtn:after {
 +
content: '';
 +
display: block;
 +
margin: auto;
 +
height: 2px;
 +
width: 0px;
 +
background: transparent;
 +
transition: width .5s ease, background-color .5s ease;
 +
}
 +
.sliding-middle-out:hover > .dropbtn:after {
 +
width: 100%;
 +
background: white;
 +
}
 +
 +
 +
  
/* Portfolio */
 
  
.portfolio {
+
/*  Dropdown Menu Functionality  */
     padding: 50px 0;
+
/* Style The Dropdown Button */
 +
.dropbtn {
 +
     color: white;
 +
    border: none;
 +
    cursor: pointer;
 
}
 
}
  
.portfolio-item {
+
/* The container <div> - needed to position the dropdown content */
     margin-bottom: 30px;
+
.dropdown {
 +
     position: relative;
 +
    display: inline-block;
 
}
 
}
  
.img-portfolio {
+
/* Dropdown Content (Hidden by Default) */
     margin: 0 auto;
+
.dropdown-content {
 +
     display: none;
 +
    position: absolute;
 +
    background-color: rgba(249,249,249,0.4);
 +
    min-width: 160px;
 
}
 
}
  
.img-portfolio:hover {
+
/* Links inside the dropdown */
     opacity: 0.8;
+
.dropdown-content a {
 +
     color: black;
 +
    font-size: 15px;
 +
    padding: 10px 16px;
 +
    text-decoration: none;
 +
    display: block;
 
}
 
}
  
/* Call to Action */
+
/* Change color of dropdown links on hover */
 +
.dropdown-content a:hover {background-color: #f1f1f1}
  
.call-to-action {
+
/* Show the dropdown menu on hover */
     padding: 50px 0;
+
.dropdown:hover .dropdown-content {
 +
     display: block;
 
}
 
}
  
.call-to-action .btn {
+
 
     margin: 10px;
+
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
</style>
 +
 
 +
</head>
 +
 
 +
<body>
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
<!-- Header -->
 +
    <header id="top" class="header">
 +
 
 +
<nav class="navbar navbar-default">
 +
  <div class="container-fluid">
 +
    <!-- Brand and toggle get grouped for better mobile display -->
 +
    <div class="navbar-header">
 +
      <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#bs-example-navbar-collapse-1" aria-expanded="false">
 +
        <span class="sr-only">Toggle navigation</span>
 +
        <span class="icon-bar"></span>
 +
        <span class="icon-bar"></span>
 +
        <span class="icon-bar"></span>
 +
      </button>
 +
      <a class="navbar-brand" href="#">BU HW 2016</a>
 +
    </div>
 +
 
 +
    <!-- Collect the nav links, forms, and other content for toggling -->
 +
    <div class="collapse navbar-collapse " >
 +
      <ul class="nav navbar-nav navbar-right">
 +
        <li class="sliding-middle-out dropdown">
 +
            <a href="#" class="dropbtn">TEAM</a>
 +
            <div class="dropdown-content">
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Team">Us</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Attributions">Attributions</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Collaborations">Collaborations</a>
 +
            </div>
 +
        </li>
 +
        <li class="sliding-middle-out dropdown">
 +
            <a href="#" class="dropbtn">PROJECT</a>
 +
            <div class="dropdown-content">
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Results">Results</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Demonstrate">Project Build</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Proof">Application</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Design">Documentation</a>
 +
            </div>
 +
        </li>
 +
        <li class="sliding-middle-out dropdown">
 +
            <a href="#" class="dropbtn">NOTEBOOK</a>
 +
            <div class="dropdown-content">
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Notebook">Timeline</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Experiments">Experiments</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Safety">Safety</a>
 +
            </div>
 +
        </li>
 +
        <li class="sliding-middle-out dropdown">
 +
            <a href="https://2016.igem.org/Team:BostonU_HW/Human_Practices" class="dropbtn">HUMAN PRACTICES</a>
 +
            <div class="dropdown-content">
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/HP/Silver">Silver</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/HP/Gold">Gold</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Integrated_Practices">Integrated Practices</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Engagement">Engagement</a>
 +
            </div>
 +
        </li>
 +
        <li class="sliding-middle-out dropdown">
 +
            <a href="#" class="dropbtn">AWARDS</a>
 +
            <div class="dropdown-content">
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Hardware">Hardware</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Software">Software</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Measurement">Measurement</a>
 +
                  <a href="https://2016.igem.org/Team:BostonU_HW/Model">Model</a>
 +
            </div>
 +
        </li>
 +
      </ul>
 +
    </div><!-- /.navbar-collapse -->
 +
  </div><!-- /.container-fluid -->
 +
</nav>
 +
 +
 
 +
 
 +
 
 +
<div class="container headerText">
 +
 
 +
<div class="row pageBranding">EXPERIENCE NEPTUNE</div>
 +
<div class="row"><br><br></div> 
 +
<div class="row headerCaption">An end to end design suite for <br>
 +
continuous flow microfluidic devices </div>
 +
<div class="row"><br><br></div> 
 +
<div class="row">
 +
<a href="https://2016.igem.org/Team:BostonU_HW/Demonstrate" > <button type="button" class="btn btn-primary" id="down">GET STARTED</button></a>
 +
</div>
 +
</div>
 +
 
 +
<br><br><br><br><br><br><br><br><br><br>
 +
 
 +
</header>
 +
 
 +
 
 +
<div class="container sectionPadding" id="basics">
 +
<div class="row">
 +
    <div class="col-md-1"></div>
 +
    <div class="col-md-10">
 +
          <div class="col-md-4" style="font-size:30px">
 +
              <div class="col-md-6 noPadding">SPECIFY</div>
 +
              <div class="col-md-3"><img src="https://static.igem.org/mediawiki/2016/3/36/T--BostonU_HW--SpecifyIcon_rcwolf.png" height="32" width:"32"></div>
 +
              <div class="col-md-3"></div>
 +
          </div>
 +
          <div class="col-md-4" style="font-size:30px">
 +
              <div class="col-md-6 noPadding">DESIGN</div>
 +
              <div class="col-md-3"><img src="https://static.igem.org/mediawiki/2016/4/41/T--BostonU_HW--DesignIcon_rcwolf.png" height="32" width:"32"></div>
 +
              <div class="col-md-3"></div>
 +
          </div>
 +
          <div class="col-md-4" style="font-size:30px">
 +
              <div class="col-md-6 noPadding">BUILD</div>
 +
              <div class="col-md-3"><img src="https://static.igem.org/mediawiki/2016/f/f5/T--BostonU_HW--BuildIcon_rcwolf.png" height="32" width:"32"></div>
 +
              <div class="col-md-3"></div>
 +
          </div>
 +
    </div>
 +
    <div class="col-md-1"></div>
 +
</div>
 +
 
 +
<div class="row">
 +
<br>
 +
</div>
 +
 
 +
<div class="row">
 +
    <div class="col-md-1"></div>
 +
    <div class="col-md-10">
 +
          <div class="col-md-4" style="font-size:15px">Begin by defining which inputs and outputs your microfluidic chip will have.
 +
Declare any limitations in terms of port size, channel width. Neptune will efficiently place and route the features of your chip.
 +
The mapper (MM) tool within the place and routing functionality has been made completely by the iGEM Team.
 +
</div>
 +
          <div class="col-md-4" style="font-size:15px">Check and visualize your device layout using the Neptune graphical user interface.
 +
Edit the design if you so desire. Establish a control sequence to move fluids through the microfluidic chip.
 +
The interface has been made completely by the iGEM Team.
 +
</div>
 +
          <div class="col-md-4" style="font-size:15px">Assemble your microfluidic system. Import our design files into a 3D Printer and CNC mill to make the chip and the pump setup.
 +
Change the setup using our parameterized designs to fit your specific needs.
 +
The design of the setup is BU iGEM work, whilst the chip manufacturing is the work of our mentors.
 +
</div>
 +
    </div>
 +
    <div class="col-md-1"></div>
 +
</div>
 +
</div>
 +
</div>
 +
 
 +
 
 +
 
 +
<div class="row">
 +
<div class="container ourProject">
 +
 
 +
<div class="container ourProjectText" style="background-color: white">
 +
 
 +
<div class="ourProjectTextBoarder">
 +
<div style="text-align:center; font-size:31px;">OUR PROJECT</div>
 +
<br>
 +
Neptune is a specify, design, and build tool for the development of continuous flow microfluidics. With Neptune, users can specify microfluidic devices through a high level description of liquid flow relations. Our application will automatically place and route the design schematic of the microfluidic and, when used in conjunction with low cost and readily available CAD tools, a user can build their custom microfluidic system in-lab.
 +
<br><br>
 +
The Boston University 2016 iGem Hardware Team is encapsulating this entire workflow through a graphical user interface. Users can write files that specify the function of the microfluidic, preview and edit their microfluidic design generated by the application, use this application directly with CAD tools such as a CNC mill to fabricate their device, and physically control valves and ports on the microfluidic chip. The iGem team is also complementing this workflow by developing and releasing open source designs of our hardware, including parametric 3D print files and firmware for microcontrollers that actuate the microfluidic valves. Finally, the iGem team is also involved in the development of the place and route software that converts a high level description of liquid flow relations into a microfluidic netlist that can that be converted into a design schematic.
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             <h1>BU 2016</h1>
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            <h3>iGem Special Track: Hardware</h3>
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             <br>
 
             <br>
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                    <h2>Fluigi is a specify, design, build workflow to aid microfluidic device development.</h2>
 
                 
 
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                                <h4>
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                                    <strong>Specify</strong>
+
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+
                                <p>Specify your microfluidic tool: inputs, outputs. Are there any limitations in terms of port size, channel width? </p>
+
<p>These will enable Fluigi to best place and route the control and flow layer of the microfluidic chip. The flow layer is the layer through which fluid flows, and the control layer consists of valves that open and close to pull/push fluid through using pressure.</p>
+
<p>One part of the specification, which is the mapper (MM) tool, has been done by our iGem Team. Click the button below to learn more about our MM tool. </p>
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                                <h4>
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                                    <strong>Design</strong>
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+
                                <p>Use the Fluigi graphical user interface to view and edit your microfluidic chip. </p>
+
<p> This graphical user interface ties together the design and build components of Fluigi. The interface has been made completely by the iGEM Team</p>
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                                    <strong>Build</strong>
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+
                                <p>Ready to make your chip? Import our design files into a 3D Printer and CNC mill to make the chip! You can also make/change the setup using our parameterized designs.</p>
+
<p> The design of the setup is BU iGEM work, whilst the chip manufacturing is the work of our mentors. </P>
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                                <a href="#" class="btn btn-light">Learn More</a>
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Latest revision as of 20:52, 4 August 2016

EXPERIENCE NEPTUNE


An end to end design suite for
continuous flow microfluidic devices












SPECIFY
DESIGN
BUILD

Begin by defining which inputs and outputs your microfluidic chip will have. Declare any limitations in terms of port size, channel width. Neptune will efficiently place and route the features of your chip. The mapper (MM) tool within the place and routing functionality has been made completely by the iGEM Team.
Check and visualize your device layout using the Neptune graphical user interface. Edit the design if you so desire. Establish a control sequence to move fluids through the microfluidic chip. The interface has been made completely by the iGEM Team.
Assemble your microfluidic system. Import our design files into a 3D Printer and CNC mill to make the chip and the pump setup. Change the setup using our parameterized designs to fit your specific needs. The design of the setup is BU iGEM work, whilst the chip manufacturing is the work of our mentors.
OUR PROJECT

Neptune is a specify, design, and build tool for the development of continuous flow microfluidics. With Neptune, users can specify microfluidic devices through a high level description of liquid flow relations. Our application will automatically place and route the design schematic of the microfluidic and, when used in conjunction with low cost and readily available CAD tools, a user can build their custom microfluidic system in-lab.

The Boston University 2016 iGem Hardware Team is encapsulating this entire workflow through a graphical user interface. Users can write files that specify the function of the microfluidic, preview and edit their microfluidic design generated by the application, use this application directly with CAD tools such as a CNC mill to fabricate their device, and physically control valves and ports on the microfluidic chip. The iGem team is also complementing this workflow by developing and releasing open source designs of our hardware, including parametric 3D print files and firmware for microcontrollers that actuate the microfluidic valves. Finally, the iGem team is also involved in the development of the place and route software that converts a high level description of liquid flow relations into a microfluidic netlist that can that be converted into a design schematic.

Neptune is completely open-source


Watch our Neptune tutorial


Meet the team behind the magic


See how Neptune is being used in other labs




Thank you to our sponsors for their support






CONTACT US


Copyright © Boston University Hardware Team Website 2016