Difference between revisions of "Team:BostonU HW/HP/Silver"
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| − | + | The first company we visited was Ginkgo Bioworks. In this short visit, we toured their Boston based facility and had the opportunity to learn both about their research, and about the tools they use to do synthetic biology. The detail that stood out to us the most was: Whoa, they sure do have a lot of hardware! As a hardware team, we strive to enable synthetic biologists by creating software and hardware that accelerates research and discovery: Ginkgo Bioworks had no shortage of tools to enable rapid discovery and characterization. They had tools to automate as much of the synthetic biology workflow as possible: PCR tools, pipetting machines and software to keep track of all device characterization. | |
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| − | + | As it would turn out, we learned that some hardware that Ginkgo used did incorporate microfluidic technology. Some devices that are used to measure expression of certain proteins in a sample do so using microliters of a sample, and these devices have built-in microfluidics. Needless to say, this equipment was very specialized and incredibly high cost. | |
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| + | Aside from very specialized machines that incorporated microfluidics, we found that Ginkgo did not use these devices in their regular workflow. | ||
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Revision as of 12:39, 18 October 2016
HUMAN PRACTICES: SILVER
Under Construction :)
When we started development of Neptune, the questions arose:
How do other researchers and industries use microfluidics?
How much does the public know about microfluidics?
By answering these two questions we could tailor Neptune to be as useful as possible, by as many people as possible.
We could develop an accessible workflow.
To this end, we decided to visit several synthetic biology labs and companies to learn more about their use of microfluidics. We also participated in public outreach and education, using this as an opportunity to educate the public about synthetic biology, and to learn more about the public's view of microfluidics.
How do other researchers and industries use microfluidics?
How much does the public know about microfluidics?
By answering these two questions we could tailor Neptune to be as useful as possible, by as many people as possible.
We could develop an accessible workflow.
To this end, we decided to visit several synthetic biology labs and companies to learn more about their use of microfluidics. We also participated in public outreach and education, using this as an opportunity to educate the public about synthetic biology, and to learn more about the public's view of microfluidics.
Public and Educational Outreach
The goal of public engagement was twofold: firstly, we wanted to do our part in educating the public about synthetic biology, and about microfluidics! Secondly, we wanted to learn about what the public knew about microfluidics- are DIY microfluidics a common practice? Does the average person know what a microfluidic is? Our first outreach was the Building with Biology event at the Boston Museum of Science.
Building with Biology | 29 June 2016
In the Building with Biology event, our team participated as guest researchers, we worked alongside museum staff to present museum goers with synthetic biology activities. These activities serve to educate the people playing, and we also got to learn about what the public knew about in synthetic biology.
One such activity included solving problems using various genetic “building blocks,” each labeled with a specific function. These literal blocks represented genetic parts that could be stacked together to make a full genetic circuit to solve the problem at hand. Kids loved this game, as it was very hands on; much to our surprise, many younger kids were very creative, and very open with new ideas, like creating synthetic blood. Another example of an activity that received great public reception was the “golden rice” table, where we showed museum goers a plate of yeast that expressed the gene for beta-carotene, and “golden bread,” baked with this yeast. We were again surprised by how many members of the public were open to such ideas.
We taught the public about microfluidics as well, making the analogy of scientists doing experiments to bakers trying to find the best cake. If the baker only needed a taste to test how the cake came out, why make a whole cake? We described microfluidics as “mini-ovens” in which scientists could make “mini-cakes,” to check if the “cake” came out good. This would save the baker/scientist lots of time and ingredients.
After these activities, we met with the public for a forum on ethics in synthetic biology. This was an amazing opportunity! We were able to sit side-by-side at a table with members of the public; we got to listen to a talk on gene drives as a solution to malaria, and we got to play out an ethical decision making process. In this roleplay, we acted as members of the local public and government in a Zambian community considering to use a gene drive to rid malaria. We got to discuss our plan of action, and we had to come to a conclusion on whether to release GM mosquitoes.
One such activity included solving problems using various genetic “building blocks,” each labeled with a specific function. These literal blocks represented genetic parts that could be stacked together to make a full genetic circuit to solve the problem at hand. Kids loved this game, as it was very hands on; much to our surprise, many younger kids were very creative, and very open with new ideas, like creating synthetic blood. Another example of an activity that received great public reception was the “golden rice” table, where we showed museum goers a plate of yeast that expressed the gene for beta-carotene, and “golden bread,” baked with this yeast. We were again surprised by how many members of the public were open to such ideas.
We taught the public about microfluidics as well, making the analogy of scientists doing experiments to bakers trying to find the best cake. If the baker only needed a taste to test how the cake came out, why make a whole cake? We described microfluidics as “mini-ovens” in which scientists could make “mini-cakes,” to check if the “cake” came out good. This would save the baker/scientist lots of time and ingredients.
After these activities, we met with the public for a forum on ethics in synthetic biology. This was an amazing opportunity! We were able to sit side-by-side at a table with members of the public; we got to listen to a talk on gene drives as a solution to malaria, and we got to play out an ethical decision making process. In this roleplay, we acted as members of the local public and government in a Zambian community considering to use a gene drive to rid malaria. We got to discuss our plan of action, and we had to come to a conclusion on whether to release GM mosquitoes.
Summer Pathways | 12 July 2016
In our experiences at Building with Biology, we found that most people in the public had never heard of microfluidics. Our next human practice event was educational outreach to young women in high school interested in STEM program.
In order to reach out to young women interested in STEM fields of study, we teamed up with the BostonU iGEM wetlab team to speak at the Boston University-hosted event Summer Pathways. During this event, we were able to teach high school students from areas around New England about basic synthetic biology and electrical engineering principles through interactive activities hosted with smaller groups. We then engaged all of these students in a discussion about synbio and engineering ethics in a forum on whether or not the proposed solution of terraforming Mars was reasonable and ethical. Each student first read a short article explaining more context and highlighting various options as possible paths of action. All of these options encouraged students to consider and discuss biologists’ responsibilities to human civilization, other life forms, and the environment.
We had an opportunity to show these young women our research and the microfluidic devices and control infrastructure we build for the devices. Again, most students had never heard of these devices, but we were able to show that these devices had practical uses in the lab.
In order to reach out to young women interested in STEM fields of study, we teamed up with the BostonU iGEM wetlab team to speak at the Boston University-hosted event Summer Pathways. During this event, we were able to teach high school students from areas around New England about basic synthetic biology and electrical engineering principles through interactive activities hosted with smaller groups. We then engaged all of these students in a discussion about synbio and engineering ethics in a forum on whether or not the proposed solution of terraforming Mars was reasonable and ethical. Each student first read a short article explaining more context and highlighting various options as possible paths of action. All of these options encouraged students to consider and discuss biologists’ responsibilities to human civilization, other life forms, and the environment.
We had an opportunity to show these young women our research and the microfluidic devices and control infrastructure we build for the devices. Again, most students had never heard of these devices, but we were able to show that these devices had practical uses in the lab.
Industry Visits
Our educational and public outreach allowed us to teach younger generations and members of the public about synthetic biology, and about microfluidics. Much to our surprise, microfluidic devices were not well known by most people we spoke too.
To gather more information about how synthetic biologists use microfluidics, we staged several visits to biotech companies that use synthetic biology, and we even spoke to a microfluidic fabrication company.
To gather more information about how synthetic biologists use microfluidics, we staged several visits to biotech companies that use synthetic biology, and we even spoke to a microfluidic fabrication company.
Ginkgo BioWorks | Day Month Year
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As it would turn out, we learned that some hardware that Ginkgo used did incorporate microfluidic technology. Some devices that are used to measure expression of certain proteins in a sample do so using microliters of a sample, and these devices have built-in microfluidics. Needless to say, this equipment was very specialized and incredibly high cost.
Aside from very specialized machines that incorporated microfluidics, we found that Ginkgo did not use these devices in their regular workflow.
