Difference between revisions of "Team:BostonU HW/HP/Gold"

Line 306: Line 306:
 
   }
 
   }
 
</style>
 
</style>
 
 
 
<body>
 
<!-- PAGE TITLE BANNER -->
 
  <div id="greyWrapper">   
 
    <div class="pageBanner">
 
      <h3 id="pageTitle">HUMAN PRACTICES: GOLD</h3>
 
    </div>
 
    <br><br><br>
 
   
 
   
 
 
 
<div class="row" style="padding-top:50px; padding-bottom:50px;">
 
  <div class="col-md-1"></div>
 
  <div class="col-md-8" style="font-size: 4em; line-height: 130%">Accessibility is our mantra.</div>
 
  <div class="col-md-3"></div>
 
</div>
 
 
<br><br>
 
 
 
  
 
<style>
 
<style>
Line 377: Line 354:
 
     color: white;
 
     color: white;
 
}
 
}
 +
</style>
  
 +
<body>
 +
<!-- PAGE TITLE BANNER -->
 +
  <div id="greyWrapper">   
 +
    <div class="pageBanner">
 +
      <h3 id="pageTitle">HUMAN PRACTICES: GOLD</h3>
 +
    </div>
  
</style>
+
<br>
 +
<br><br><br><br>
 +
   
  
 +
<div class="row" style="padding-top:50px; padding-bottom:50px;">
 +
  <div class="col-md-1"></div>
 +
  <div class="col-md-8" style="font-size: 4em; line-height: 130%"> Neptune: Accessible microfluidics for all </div>
 +
  <div class="col-md-3"></div>
 +
</div>
  
<div class="row" style="padding-top:100px; padding-bottom:100px;">
+
<div class="row" style="padding-top:20px; padding-bottom:50px;">
 
   <div class="col-md-1"></div>
 
   <div class="col-md-1"></div>
   <div class="col-md-10" style="background-color: white; padding-top:50px; padding-bottom:50px;">  
+
   <div class="col-md-10" style="font-size: 1.5em; line-height: 130%">  
  
 +
When we started development of Neptune the question was raised:
 +
<br><br>
 +
How do other researchers and industries use microfluidics?
 +
<br>
 +
How much does the public know about microfluidics?
 +
<br><br>
 +
By answering these two questions we could tailor Neptune to be as useful as possible, by as many people as possible.
 +
<br>
 +
We could develop an accessible workflow.
 +
<br><br>
 +
To this end, we decided to visit several synthetic biology labs and companies to learn more about their use of microfluidics. We also participated in public outreach and education, using this as an opportunity to educate the public about synthetic biology, and to learn more about the public's view of microfluidics. Finally, we wrote several blogs on IP in synthetic biology, drawing from what we learned about the importance of accessibility in synthetic biology.
 +
<br><br>
 +
In This page, we cover 3 sections to our Silver HP contributions.
 +
<br>
 +
First we discuss our public outreach and education contributions.
 +
<br>
 +
Then we summarize our industry visits.
 +
<br>
 +
Finally, we conclude by exploring our contribution to the iGEM community: A reference blog on IP in synthetic biology. 
  
 +
  </div>
 +
  <div class="col-md-1"></div>
 +
</div>
  
 +
<br><br>
  
    <div class="row">
 
      <div class="col-md-1">
 
      </div>
 
      <div class="col-md-11">
 
        <br><br><br>
 
        <div style="font-size: 2em; line-height: 150%;">An Overview</div>
 
      </div>
 
    </div>
 
    <div class="row" style="padding-top:20px; padding-bottom:20px;">
 
      <div class="col-md-1"></div>
 
      <div class="col-md-10">
 
        As a hardware team, our vision is to enable synthetic biologists to do better research by providing powerful and easy to use tools that solve common synthetic biology problems. We want to provide tools that accelerate the pace of research, and tools that enable synthetic biologists to push the bounds of what we know is possible.
 
        <br><br>
 
  
        When we set out to develop Neptune, our goal was not to develop a software tool, nor to build microfluidics, nor to develop original hardware to control these devices. We did all of these things of course, and we are proud of it! But our original goal was much more important. We set out with the goal of making microfluidics accessible to all researchers. In a way, our goal is to enable the entire synthetic biology to consider microfluidics as their next approach to an experimental design. We set out to make the entire process of designing, fabricating, and controlling a microfluidic device as easy and intuitive as an Excel spreadsheet, and as low cost as any other piece of lab equipment. We set out to completely remove the barrier of entry for any researchers interested in experimenting with microfluidic devices.
 
        <br><br>
 
        Accessibility, and enabling synthetic biologists to use new and exciting tools, is our goal.
 
        To that end, our approach to human practices in iGEM was very clear: we wanted to explore the role intellectual property practices had in the ecosystem of synthetic biology software and hardware. Software and hardware are invaluable assets to synthetic biologists, and we wanted to know: how do patent practices affect the interaction between these tools, and researchers who want to use these tools? What role do open source software and hardware solutions have in the synthetic biology ecosystem?
 
  
        <br><br>
 
        As a team, we set out to study intellectual property and the affect it has on synthetic biology tools, and synthetic biology research. We also wanted to make sure that, as we developed Neptune, our workflow was integrated with intellectual property practices that would enable synthetic biologists to use microfluidics; we did not want to develop a workflow that was prohibitive to the communities use.
 
        <br><br>
 
 
        <div>
 
          <br><br>
 
          <div style="font-size: 1.5em; line-height: 130%;">
 
            Our contributions toward meeting the gold medal criteria for human practices are threefold:
 
          </div>
 
          <br>
 
 
          <ol>
 
            <li style="font-size: 1.5em; line-height: 130%;">
 
              We developed a workflow that is completely open source, and accessible. The tools that we built are open source, and the outside tools used to integrate with our workflow are open source and accessible as well.
 
            </li>
 
            <br>
 
            <div>
 
              <a href="https://github.com/CIDARLAB/Neptune" style="padding-right:20px"> <button type="button" class="btn btn-primary" id="down">DOWNLOAD NEPTUNE</button></a>
 
              <a href="http://www.openscad.org/" style="padding-right:20px"> <button type="button" class="btn btn-primary" id="down">DOWNLOAD OPENSCAD</button></a>
 
              <a href="https://ultimaker.com/en/products/cura-software" > <button type="button" class="btn btn-primary" id="down">DOWNLOAD CURA</button></a>
 
            </div>
 
            <br>
 
            <li style="font-size: 1.5em; line-height: 130%;">
 
              We investigated intellectual property practices in synthetic biology. We found that there was a lot to discuss, and a lot of history to look at too! So we partnered with the BU Foundational Research iGEM team to publish a set of blog posts that explore IP practices in synthetic biology.
 
            </li>
 
            <br>
 
            <div>
 
              <a href="https://buigem2016.wordpress.com/" style="padding-right:20px"> <button type="button" class="btn btn-primary" id="down">VISIT "WHO OWNS WHAT"</button></a>
 
            </div>
 
            <br>
 
            <li style="font-size: 1.5em; line-height: 130%;">
 
              Recognizing the limitations of open source software and hardware, we wanted to ensure Neptune would always remain well documented, with a robust community of researchers who use our software, and developers who contribute to making it a great tool. Thus we put our software under the umbrella of Nona, a open source synthetic biology distributor.
 
            </li>
 
            <br>
 
            <div>
 
              <a href="http://nonasoftware.org/available-software/" style="padding-right:20px"> <button type="button" class="btn btn-primary" id="down">SEE OUR WORK WITH NONA</button></a>
 
            </div>
 
            <br>
 
          </ol>
 
        </div>
 
      </div>
 
      <div class="col-md-1"></div>
 
    </div>
 
    <br>
 
  </div>
 
  <div class="col-md-1"></div>
 
</div>
 
  
  

Revision as of 15:15, 18 October 2016


HUMAN PRACTICES: GOLD






Neptune: Accessible microfluidics for all
When we started development of Neptune the question was raised:

How do other researchers and industries use microfluidics?
How much does the public know about microfluidics?

By answering these two questions we could tailor Neptune to be as useful as possible, by as many people as possible.
We could develop an accessible workflow.

To this end, we decided to visit several synthetic biology labs and companies to learn more about their use of microfluidics. We also participated in public outreach and education, using this as an opportunity to educate the public about synthetic biology, and to learn more about the public's view of microfluidics. Finally, we wrote several blogs on IP in synthetic biology, drawing from what we learned about the importance of accessibility in synthetic biology.

In This page, we cover 3 sections to our Silver HP contributions.
First we discuss our public outreach and education contributions.
Then we summarize our industry visits.
Finally, we conclude by exploring our contribution to the iGEM community: A reference blog on IP in synthetic biology.