Team:Manchester/Model/Costing

Manchester iGEM 2016

Cost Analysis


Contents

Overview and Motivation
Methodology
Results
Conclusions

Overview and Motivation

During our human practices discussion with the Police it was brought to our attention that not all officers carry a breathalyser device and they are rather bulky: our patch could be an alternative, compact solution that all officers could carry provided it was suitable.

This obviously introduces constraints to the device if is to be suitable for this purpose.

Constraint Summary Constraint Reasoning Value
Maximum expression time The AlcoPatch would need to equally as fast as current methods, if not faster. This would increase the likelihood of uptake as it is an improvement on the current portable methods of blood alcohol detection Requirement suggested during the discussion 120 seconds
Minimum expression amount Expression needs to be high enough that the result can be seen since the device it designed to be portable and used 'roadside' where lighting conditions may not be ideal Experimental observation 20 mM

While this analysis is regarding Glucose not Alcohol it is included as a proof of concept of the system rather than to provide informative results. Since the majority of the project focused on Alcohol however these constraints were still used as all analyses should be informed and guided by the human practices.


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Methodology

The model was run for a range of different enzyme ratios, maintaining a constant total amount of enzyme

The concentration of Glucose used in the model was set to the concentration equivalent to the sweat alcohol concentration of someone who was on the legal limit of drink driving.

$$ [E_{total}] = [GOx] + [HRP]$$

All simulations that didn't violate the constraints were recorded

$$[ABTS_{Oxidised}]_{t_{max}} > [ABTS_{Oxidised}]_{min}$$

The cost of the simulation was estimated assuming the cost of everything but the enzyme costs are negligible

$$Cost_{total} = Cost_{GOx} [GOx] + Cost_{HRP} [HRP]$$

Total Cost vs Fraction of GOx was then plotted



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Results


Probability density function for the Km of Horseradish Peroxidase

Figure 1 shows the patch costs when the total amount of enzyme in the system is 0.01 mM

Probability density function for the Km of Horseradish Peroxidase

Figure 2 shows the patch costs when the total amount of enzyme in the system is 0.015 mM

Probability density function for the Km of Horseradish Peroxidase

Figure 3 shows the patch costs when the total amount of enzyme in the system is 0.02 mM

Probability density function for the Km of Horseradish Peroxidase

Figure 4 shows the patch costs when the total amount of enzyme in the system is 0.04 mM


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Conclusions

From the graphs you can clearly see that the minimum cost can be achieved with the range GOx fraction = XXX-YYY, however it is also shown that at additional cost expense, the time to expression can be reduced if required. The ranges identified as of interest should be tested experimentally to further validate these results. In some situations the constraints are not met for example at a GOx fraction of 0 or 1 in all situations, but also some ranges between these dependant on the constraint set. The points of constraint failure could also be experimentally validated.



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