Difference between revisions of "Team:Paris Saclay/Notebook/October/19"

(Wednesday 19th October)
 
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{{Team:Paris_Saclay/notebook_header}}
 
{{Team:Paris_Saclay/notebook_header}}
  
= Wednesday 19<sup>th</sup> October=
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= Wednesday 19 <sup>th</sup> October=
 
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===Cytometry measurements===
===Visualization===
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===Cytometry measurements====
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''By Sylvie''
 
''By Sylvie''
  
No clone was observed on the control plate from 18/10
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There was no clone on the control plate from 18/10.
 
Clones have grown on the other plates.
 
Clones have grown on the other plates.
  
Transformations were done from the Petri dish containing the preparation diluted 10 times with :
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Transformations were done from the plates containing the preparation diluted 10 times with:
 
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50 mL LB (CM 15μg/L+Amp 50μg/L)
 
50 mL LB (CM 15μg/L+Amp 50μg/L)
 
500μL of cell preparation at DO=2,2
 
500μL of cell preparation at DO=2,2
  
This preparation was divided in 4 tubes of 4ml and a falcon of 32 ml.
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This preparation was divided in 4 tubes of 4ml and a falcon tube of 32 ml.
  
In 1 pool of 4 tubes we added rapalog in order to test the fluorescence :
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In the 4 tubes, we added rapalog to test the fluorescence:
tube1 : control without rapalog
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*tube 1: control without rapalog
tube : 5 nM of rapalog
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*tube 2: 5 nM of rapalog
tube : 50 nM of rapalog
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*tube 3: 50 nM of rapalog
tube4 : 500 nM of rrapalog
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*tube 4: 500 nM of rapalog
  
 
After 5 hours of culture, cytometry didn't show any fluorescence.
 
After 5 hours of culture, cytometry didn't show any fluorescence.
  
  
For the falcon of the remaining preparation (32ml) :
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For the falcon of the remaining preparation (32ml):
 
*Centrifuge
 
*Centrifuge
* Discard the supernatant
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*Discard the supernatant
*Resuspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
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*Re-suspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
*Discardthe supernatant
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*Discard the supernatant
*Resuspend in 800 μL of TNG buffer and 20μL of PMSI
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*Re-suspend in 800 μL of TNG buffer and 20μL of PMSI
*Divide the preparation in 8 eppendorf (100μL)
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*Divide the preparation in 8 Eppendorf (100μL)
*For one eppendorf : add « cap of glass bead, acid washed) 150-212μm sigma »
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*For one Eppendorf: add glass bead, acid washed (150-212μm)
 
*30 min on vortex
 
*30 min on vortex
 
*Add 100μL of buffer in each tube
 
*Add 100μL of buffer in each tube
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Read on a board (plaque) with a 488 nm excitation.
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Read on a plate at 488 nm excitation.
  
 
{{Team:Paris_Saclay/notebook_footer}}
 
{{Team:Paris_Saclay/notebook_footer}}

Latest revision as of 23:55, 19 October 2016

Wednesday 19 th October

Cytometry measurements

By Sylvie

There was no clone on the control plate from 18/10. Clones have grown on the other plates.

Transformations were done from the plates containing the preparation diluted 10 times with: 50 mL LB (CM 15μg/L+Amp 50μg/L) 500μL of cell preparation at DO=2,2

This preparation was divided in 4 tubes of 4ml and a falcon tube of 32 ml.

In the 4 tubes, we added rapalog to test the fluorescence:

  • tube 1: control without rapalog
  • tube 2: 5 nM of rapalog
  • tube 3: 50 nM of rapalog
  • tube 4: 500 nM of rapalog

After 5 hours of culture, cytometry didn't show any fluorescence.


For the falcon of the remaining preparation (32ml):

  • Centrifuge
  • Discard the supernatant
  • Re-suspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
  • Discard the supernatant
  • Re-suspend in 800 μL of TNG buffer and 20μL of PMSI
  • Divide the preparation in 8 Eppendorf (100μL)
  • For one Eppendorf: add glass bead, acid washed (150-212μm)
  • 30 min on vortex
  • Add 100μL of buffer in each tube
  • centrifuge
  • Add Rapalog at 150nM in each tube except for one control
  • Incubate 30 min


Read on a plate at 488 nm excitation.