Difference between revisions of "Team:Peking/Attributions"

 
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        <li class="menu-1"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking" >Home</a></li>
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                            <li class="menu-1"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking" >Home</a></li>
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                            <li class="dropdown menu-2"><a class="dropdown-toggle" data-toggle="dropdown" href="#" > Achievements</a>
                      <li><a href="https://2016.igem.org/Team:Peking/Description" >Decription</a></li>
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                                <ul class="dropdown-menu">
                      <li><a href="https://2016.igem.org/Team:Peking/Design" >Design</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Results" >Results</a></li>
                      <li><a href="https://2016.igem.org/Team:Peking/Proof" >Proof of Concept</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Basic_Part" >Parts</a></li>
                      <li><a href="https://2016.igem.org/Team:Peking/Demonstrate" >Demonstrate</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Collaborations" >Collaborations</a></li>
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                                </ul>
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        <li class="dropdown menu-3"><a class="dropdown-toggle" data-toggle="dropdown" href="#" >Parts</a>
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                            <li class="dropdown menu-3"><a class="dropdown-toggle" data-toggle="dropdown" href="#">Project</a>
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                      <li><a href="https://2016.igem.org/Team:Peking/Basic_Part" >Basic parts</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Description" >Overview</a></li>
                      <li><a href="https://2016.igem.org/Team:Peking/Composite_Part" >Composite parts</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Design" >Design</a></li>
                      <li><a href="https://2016.igem.org/Team:Peking/Part_Collection" >Parts collection</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Crosslinking" >Crosslinking</a></li>
                  </ul>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Uranyl-adsorption" >Uranyl adsorption</a></li>
                </li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Clearance" >Clearance</a></li>
        <li class="menu-4"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking/Human_Practices" >Practices</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Secretion" >Secretion</a></li>
        <li class="menu-5"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking/Collaborations" >Collaboration</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Demonstrate" >Final Performance</a></li>
        <li class="menu-6"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking/Model" >Modeling</a></li>
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                                </ul>
                <li class="dropdown menu-7"><a class="dropdown-toggle" data-toggle="dropdown" href="#" >Lab</a>
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                            </li>
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                            <li class="dropdown menu-4"><a class="dropdown-toggle" data-toggle="dropdown" href="#" >Modeling</a>
                        <li><a class="" href="https://2016.igem.org/Team:Peking/Team" >Team</a></li>
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                        <li><a class="" href="https://2016.igem.org/Team:Peking/Attributions" >Attribution</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Model/GelPoint" > Model of Gel Point </a></li>
                        <li><a class="" href="https://2016.igem.org/Team:Peking/Notebook" >Notebook</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Model/MassDistribution" > Model of Mass Distribution</a></li>
          </ul>
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                                    <li><a href="https://2016.igem.org/Team:Peking/Software" >Software</a></li>
                </li>
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                                </ul>
                <li class="dropdown menu-8"><a class="colapse-menu1" data-toggle="dropdown" href="https://2016.igem.org/Team:Peking/Interlab" >Interlab</a>
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                            <li class="dropdown menu-5"><a class="dropdown-toggle" data-toggle="dropdown" href="#" >Practices</a>
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                                    <li><a href="https://2016.igem.org/Team:Peking/HP/Gold" >Overview</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/HP/311" >Field research</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/HP/questionnaire" >Questionnaire</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/HP/consulting" >Consulting</a></li>
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                                    <li><a href="https://2016.igem.org/Team:Peking/HP/otherHP" >Education&nbsp;&amp;&nbsp;Other</a></li>
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                                </ul>
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                            <li class="menu-6"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking/Safety" >Safety</a>
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                                        <li><a class="" href="https://2016.igem.org/Team:Peking/Attributions" >Attribution</a></li>
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                                        <li><a class="" href="https://2016.igem.org/Team:Peking/Notebook" >Notebook</a></li>
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                                <li class="menu-8"><a class="colapse-menu1" href="https://2016.igem.org/Team:Peking/Interlab" >Interlab</a>
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                </div>
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            </div>
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        </div>
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             <h1>Attributions<span>.</span></h1>
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             <h1>Attributions</h1>
 
             <p class="title1" style="text-align:center">The idea of this project was conceived by the team; advisors and instructors gave advices and suggestions on the implementation of this idea.</p>
 
             <p class="title1" style="text-align:center">The idea of this project was conceived by the team; advisors and instructors gave advices and suggestions on the implementation of this idea.</p>
 
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         <li><a href="#sponsors">Sponsors</a></li>
 
         <li><a href="#sponsors">Sponsors</a></li>
 
     </ul>
 
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                 <a id="members"></a>       
 
                 <a id="members"></a>       
 
                 <h3 class="classic-title";"><span>Member’s Attributions</span></h3>                       
 
                 <h3 class="classic-title";"><span>Member’s Attributions</span></h3>                       
                <p>All the data presented on this wiki was measured, collected, and analyzed by the team members. All the plasmids directly involved in the data presented on this wiki were constructed by the team members. The idea conceiving, content planning, execution, and result analysis of human practice were all done by the team members. The following is the detailed attribution:
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</p>
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                 <p>
 
                 <p>
                 <strong>LI Cheng</strong> is the team leader of Peking iGEM 2016. He participated in conceiving the project, took charge of troubleshooting, and managed the experiments, guaranteeing the normal operation of the lab.<br/>
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                 <strong>LI Cheng</strong> mainly focused on the overall operating of the team, meanwhile he took part in the evaluation of protein function. He was also involved in team interaction and academic communication.<br/>
                 <strong>YANG Xiaoyu</strong> was committed to ameliorate the paired dCas9 (PC) reporter system, namely, to enhance the sensitivity and robustness. Early in the project, he was also responsible for information gathering, experiment design, and lab management<br/>
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                 <strong>YANG Xiaoyu</strong> was responsible for the plasmid construction at early stage and then mainly focused on the protein purification. He also participated in secretion effect examination. <br/>
 
+
                 <strong>BAI Ke</strong> was in charge of all experiments related to secretion, including plasmid construction, gene expression and secretory protein examination. He is also one of the speakers who give presentation.<br/>
                 <strong>BAI Ke</strong> was in charge of Human Practice and also worked in the wet lab to construct and prepare plasmids for gRNA in vitro transcription.<br/>
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                 <strong>DONG Yiming</strong> was responsible for building secretion module, parts and the interlab.<br/>
                 <strong>DONG Yiming</strong>
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                 <strong>LI Yuexuan</strong> was responsible for uranyl adsorption capacity test assay.<br/>
                was responsible for designing and manufacturing the portable electronic device that convert optical signal into analogue electrical signal.<br/>
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                 <strong>YANG Changru</strong> was mainly responsible for the test experiment (crosslinking) of protein and modeling, as well as designing some plasmids. He also did some quantitative experiments of uranyl absorption and secretion with the cooperation of teammates.<br/>
                 <strong>LI Yuexuan</strong> worked as the financial manager of the team. She was also responsible for plasmid construction and submission.<br/>
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                 <strong>ZHAO Shijun</strong> devoted himself to molecular cloning and part construction.<br/>
                 <strong>YANG Changru</strong> was in charge of building <i>M.tuberculosis</i>-sensing system using Molecule Beacon. He was also engaged in the protein purification of dCas9 fusion proteins.<br/>
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                 <strong>LYV Nayun</strong> took part in the protein purification and the analysis of the questionnaire results.<br/>
                 <strong>ZHAO Shijun</strong> was in charge of measuring the luminescence intensity of PC reporter system. She analyzed the entire experimental data.<br/>
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                 <strong>WANG Dingyu</strong> was responsible for protein purification and some art design.<br/>
                 <strong>LV Nayun</strong> helped to complete the plasmid construction of sgRNA and was in part responsible for human practice.<br/>
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                 <strong>LI Jiamian</strong> was the art designer and photographer of our team and he participated in wiki building and PowerPoint design.<br/>
                 <strong>WANG Dingyu</strong> was in charge of the construction of CRISPR gRNA as well as RNA scaffold in the beginning. Later she was working on the purification of dCas9 fusion protein.<br/>
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                 <strong>WEI Jingyi</strong> was responsible for plasmid construction for Secretion Part.<br/>
                 <strong>LI Jiamian</strong> took the task of cloning dCas9-luciferase. She was also responsible for the testing of PC reporter system.<br/>
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                 <strong>WANG Yuqing</strong> was the lab manager and in charge of wiki building, she also participated in human practices, art design and part of the experimental work.<br/>
                 <strong>WEI Jingyi</strong> participated in plasmid construction, protein purification, and wiki building. She was also the designer of our PowerPoint slides.<br/>
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                 <strong>TENG Huaiyuan</strong> was in charge of modeling and software design. He studied Flory J.Paul's theory in polymer chemistry and furthermore established the model of molecular weight distribution in our case.<br/>
                 <strong>WANG Yuqing</strong> was in charge of Modeling. His main task was to computationally search for the suitable guide sequences. Also, he was the lab manager for the normal operation of our lab.<br/>
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                <strong>NING Xin</strong> was mainly responsible for the molecular cloning of the secretion system, while participating in the measurement of proteins's functions as well.<br/>
                 <strong>TENG Huaiyuan</strong>was in charge of Modeling. His main task was to computationally search for the suitable guide sequences. Also, he was the lab manager for the normal operation of our lab.<br/>
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                <strong>CHANG Xuyao</strong> was in charge of plasmid construction of the Secretion Part.
 
                 </p>
 
                 </p>
 
             </div>
 
             </div>
      
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     <br/><br/><br/>
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             <div>   
 
             <div>   
 
                 <a id="acknowledgement"></a>  
 
                 <a id="acknowledgement"></a>  
 
                   <h3 class="classic-title";"><span>Acknowledgement</span></h3>                               
 
                   <h3 class="classic-title";"><span>Acknowledgement</span></h3>                               
                   <p>We'd like to thank all those who have helped us over the summer, without whose sincere support The Uranium Reaper Project goals would have not been achieved.
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                   <p>We'd like to thank all those who have helped us over the summer. Without their sincere support, the Uranium Reaper would have not been achieved.
 
</p>
 
</p>
                  
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                 <h4>General support</h4>
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                 <br>
                 <p><strong>Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian</strong> and other teachers helped us during our brainstorming and gave us useful suggestions.<br>
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                 <h4>General Support</h4>
                 <strong>Prof. OUYANG Qi</strong> and<strong> Prof. LIU Chunli</strong> kindly provided the laboratory to us for experiments.
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                 <p><strong>Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian, ZHANG Yihao</strong> and other teachers helped us during our brainstorming and gave us useful suggestions.<br>
 +
                 <strong>Prof. OUYANG Qi</strong> and<strong> Prof. LIU Chunli</strong> kindly provided the laboratory to us.<br>
 +
                <strong>ZHANG Yihao</strong> gave us meticulous guidance and great help, from the beginning to the end.  
 
                 </p>
 
                 </p>
  
                 <h4>Materials support</h4>
+
                <br>
                 <p><strong>Dr. ZHANG Wenbing</strong> provided us with the plasmid of 3B(Tri-SpyCatcher within 15X linker).<br>
+
                 <h4>Materials Support</h4>
                     <strong> Prof. ZHOU Lu</strong> provided us with Uranyl-binding Protein, also called SUP.<br>
+
                 <p><strong>Dr. ZHANG Wenbing</strong> provided us with the plasmid of 3B (Tri-SpyCatcher flanked by 15X linker).<br>
                     <strong>Prof. LIU Chunli</strong>allowed us to use his lab to do experiments on uranyl ion. The uranyl nitrate solution and Arsenazo III was provided by Prof. LIU.<br>
+
                     <strong> Prof. ZHOU Lu</strong> provided us with Super Uranyl-binding Protein (SUP).<br>
                   <strong>Prof. LOU Chunbo</strong> provided us with the strain B.Subtilis and mSA, heavy metal ions binding proteins: lead-binding protein, mercury-binding protein and cadmium-binding protein.<br>
+
                     <strong>Prof. LIU Chunli</strong> allowed us to use his lab to do experiments on uranyl ion. The uranyl nitrate solution and Arsenazo III was provided by Prof. LIU.<br>
 +
                   <strong>Prof. LOU Chunbo</strong> provided us with <i>B.subtilis</i>, gene sequence of mSA, and gene sequences of heavy metal ions binding proteins (lead-binding protein, mercury-binding protein and cadmium-binding protein).<br>
 
                   <strong>Dr. DU Pei</strong> provided the beads to us and gave us experimental guidance.<br>
 
                   <strong>Dr. DU Pei</strong> provided the beads to us and gave us experimental guidance.<br>
                   <strong>BIT-China</strong> gave us the important Interlab kit.
+
                   <strong>BIT-China</strong> provided us with the important Interlab kit.
 
                 </p>
 
                 </p>
  
                 <h4>Experiment equipment support</h4>
+
                <br>
                 <p><strong>Prof. OUYANG Qi</strong> lent the Akta Pure to us for all proteins purification.<br>
+
                 <h4>Experiment Equipment Support</h4>
                     <strong>Prof. CHANG Zengyi</strong> and <strong>Dr. WANG Qingsong</strong> provided us with Scanner and helped with the setup and scan of gels.<br>
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                 <p><strong>Prof. OUYANG Qi</strong> provided the Akta Pure to us for protein purification.<br>
                   <strong>Prof. LIU Chunli</strong> provided us with Geiger counter to test the radiation level in and around our lab.<br>
+
                     <strong>Prof. CHANG Zengyi</strong> and <strong>Dr. WANG Qingsong</strong> provided us with the scanner and helped with the setup and scan of gels.<br>
                   <strong>Core Facilities</strong>, School of Life Sciences, Peking University,assisted us with ITC.<br>
+
                   <strong>Prof. LIU Chunli</strong> provided us with Geiger counter to test the radiation level in our lab.<br>
                   <strong>the State Key Laboratory of environmental simulation and pollution control</strong> provided the Aurora M90 mass spectrograph.
+
                   <strong>Core Facilities</strong> at School of Life Sciences, Peking University, assisted us with ITC.<br>
 +
                   <strong>The Testing center of College of Environmental Sciences and Engineering, PKU</strong> provided the Aurora M90 mass spectrograph.
 
                 </p>
 
                 </p>
  
                 <h4>Theoretical guidance</h4>
+
                <br>
                 <p> <strong>ZHANG Yihao</strong> and <strong>WANG Yu</strong>,The wiki designers of Peking iGEM 2015,gave us many suggestions about wiki building.<br>
+
                 <h4>Theoretical Guidance</h4>
                     <strong>Dr. YU Daqi</strong> of Prof. OUYANG Qi’s lab helped us a lot in experimental operating and data analysis.<br>
+
                 <p> <strong>ZHANG Yihao</strong> and <strong>WANG Yu</strong> who is a former member of Peking iGEM 2015, gave us thoughtful suggestions about wiki building.<br>
 +
                     <strong>Dr. YU Daqi</strong> helped us a lot in experimental operating and data analysis.<br>
 
                     <strong>Prof. ZHANG Wenbing, Prof. LOU Chunbo</strong> and <strong>Dr. YU Daqi</strong> kindly helped our team with modeling of the project.<br>
 
                     <strong>Prof. ZHANG Wenbing, Prof. LOU Chunbo</strong> and <strong>Dr. YU Daqi</strong> kindly helped our team with modeling of the project.<br>
                   <strong>Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian</strong> and <strong>ZHANG Yihao</strong>,the instructors, coached us for the presentation.<br>
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                   <strong>Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian</strong> and <strong>ZHANG Yihao</strong> coached us for the presentation.<br>
                     <strong>Prof. LAI Luhua</strong> and <strong>Prof. RAO Yi</strong> participated in our presentation rehearsal and gave suggestions for revisions.
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                  <strong>LI Ying</strong> and <strong>ZHANG Xueping</strong> provided us with kind suggestions for our presentation.<br>
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                     <strong>Prof. LI Chenjian, Prof. TANG Chao, Prof. CHEN Xing, Prof. CHEN Peng</strong> and <strong>Prof. LAI Luhua</strong> participated in our presentation rehearsal and gave suggestions for revisions.<br>
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                    <strong><a href="http://yiwen.ba">Yiwen Expert Text Solutions (yiwen.ba)</a></strong> provided expert text correction service for the content of our wiki.<br>
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                    <strong>NWPU</strong> offered us helpful suggestions of PowerPoint.
 
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                 <h4>Synthetic biology course</h4>
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                <br>
                 <p>From March to June, an introductory course of synthetic biology was hold by College of Life Sciences, Peking University.During the course, the teachers, also the instructors gave us kind guidance and judged our project design. In late June, we started in the lab to start our project.  
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                 <h4>An Introduction to Synthetic Biology Course</h4>
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                 <p>From March to June, an introductory course of synthetic biology was hold by College of Life Sciences, Peking University. During the course, instructors gave us detailed guidance to our original project design, and helped us to make improvement.
 
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                                 <a href="http://dean.pku.edu.cn/pkudean/index.html"><img src="https://static.igem.org/mediawiki/2016/2/2e/T--Peking--images_sponsors_PKU_Administration.png"></a>
 
                                 <a href="http://dean.pku.edu.cn/pkudean/index.html"><img src="https://static.igem.org/mediawiki/2016/2/2e/T--Peking--images_sponsors_PKU_Administration.png"></a>
 
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Latest revision as of 12:29, 29 November 2016

Standard

Attributions

The idea of this project was conceived by the team; advisors and instructors gave advices and suggestions on the implementation of this idea.

Member’s Attributions

LI Cheng mainly focused on the overall operating of the team, meanwhile he took part in the evaluation of protein function. He was also involved in team interaction and academic communication.
YANG Xiaoyu was responsible for the plasmid construction at early stage and then mainly focused on the protein purification. He also participated in secretion effect examination.
BAI Ke was in charge of all experiments related to secretion, including plasmid construction, gene expression and secretory protein examination. He is also one of the speakers who give presentation.
DONG Yiming was responsible for building secretion module, parts and the interlab.
LI Yuexuan was responsible for uranyl adsorption capacity test assay.
YANG Changru was mainly responsible for the test experiment (crosslinking) of protein and modeling, as well as designing some plasmids. He also did some quantitative experiments of uranyl absorption and secretion with the cooperation of teammates.
ZHAO Shijun devoted himself to molecular cloning and part construction.
LYV Nayun took part in the protein purification and the analysis of the questionnaire results.
WANG Dingyu was responsible for protein purification and some art design.
LI Jiamian was the art designer and photographer of our team and he participated in wiki building and PowerPoint design.
WEI Jingyi was responsible for plasmid construction for Secretion Part.
WANG Yuqing was the lab manager and in charge of wiki building, she also participated in human practices, art design and part of the experimental work.
TENG Huaiyuan was in charge of modeling and software design. He studied Flory J.Paul's theory in polymer chemistry and furthermore established the model of molecular weight distribution in our case.
NING Xin was mainly responsible for the molecular cloning of the secretion system, while participating in the measurement of proteins's functions as well.
CHANG Xuyao was in charge of plasmid construction of the Secretion Part.




Acknowledgement

We'd like to thank all those who have helped us over the summer. Without their sincere support, the Uranium Reaper would have not been achieved.


General Support

Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian, ZHANG Yihao and other teachers helped us during our brainstorming and gave us useful suggestions.
Prof. OUYANG Qi and Prof. LIU Chunli kindly provided the laboratory to us.
ZHANG Yihao gave us meticulous guidance and great help, from the beginning to the end.


Materials Support

Dr. ZHANG Wenbing provided us with the plasmid of 3B (Tri-SpyCatcher flanked by 15X linker).
Prof. ZHOU Lu provided us with Super Uranyl-binding Protein (SUP).
Prof. LIU Chunli allowed us to use his lab to do experiments on uranyl ion. The uranyl nitrate solution and Arsenazo III was provided by Prof. LIU.
Prof. LOU Chunbo provided us with B.subtilis, gene sequence of mSA, and gene sequences of heavy metal ions binding proteins (lead-binding protein, mercury-binding protein and cadmium-binding protein).
Dr. DU Pei provided the beads to us and gave us experimental guidance.
BIT-China provided us with the important Interlab kit.


Experiment Equipment Support

Prof. OUYANG Qi provided the Akta Pure to us for protein purification.
Prof. CHANG Zengyi and Dr. WANG Qingsong provided us with the scanner and helped with the setup and scan of gels.
Prof. LIU Chunli provided us with Geiger counter to test the radiation level in our lab.
Core Facilities at School of Life Sciences, Peking University, assisted us with ITC.
The Testing center of College of Environmental Sciences and Engineering, PKU provided the Aurora M90 mass spectrograph.


Theoretical Guidance

ZHANG Yihao and WANG Yu who is a former member of Peking iGEM 2015, gave us thoughtful suggestions about wiki building.
Dr. YU Daqi helped us a lot in experimental operating and data analysis.
Prof. ZHANG Wenbing, Prof. LOU Chunbo and Dr. YU Daqi kindly helped our team with modeling of the project.
Prof. OUYANG Qi, Prof. LOU Chunbo, Dr. ZHANG Haoqian and ZHANG Yihao coached us for the presentation.
LI Ying and ZHANG Xueping provided us with kind suggestions for our presentation.
Prof. LI Chenjian, Prof. TANG Chao, Prof. CHEN Xing, Prof. CHEN Peng and Prof. LAI Luhua participated in our presentation rehearsal and gave suggestions for revisions.
Yiwen Expert Text Solutions (yiwen.ba) provided expert text correction service for the content of our wiki.
NWPU offered us helpful suggestions of PowerPoint.


An Introduction to Synthetic Biology Course

From March to June, an introductory course of synthetic biology was hold by College of Life Sciences, Peking University. During the course, instructors gave us detailed guidance to our original project design, and helped us to make improvement.




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