Difference between revisions of "Team:SDU-Denmark/Description"

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<p> <img src="https://static.igem.org/mediawiki/2016/e/e9/T--SDU-Denmark--minibacto.png" width="5%" style="display:inline-block;margin-right:5px;">The bacteriocins
 
<p> <img src="https://static.igem.org/mediawiki/2016/e/e9/T--SDU-Denmark--minibacto.png" width="5%" style="display:inline-block;margin-right:5px;">The bacteriocins
are the antimicrobial peptides in our hybrid silk. Resistance development in bacteria has been creating difficulties in curing infections with traditional antibiotics. The use of bacteriocins could shift some of the resistance pressure creating an alternative treatment. The bacteriocins act as bactericidal peptides through pore formation and interference with intracellular enzymatic reactions of specific target bacteria. We, and <a target="blank" href="https://2016.igem.org/Team:Stockholm">the iGEM team of Stockholm</a>, performed a <a target="blank" href="https://2016.igem.org/Team:SDU-Denmark/Demonstrate#effect">MIC-test</a> to observe the effect of our bacteriocins towards resistant bacteria. According to the test, the bacteriocins were proven to be quite effective.  <a href="https://2016.igem.org/Team:SDU-Denmark/Bacteriocins"> For further information about bacreriocins, read here</a>.  </p><br>
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are the antimicrobial peptides in our hybrid silk. Resistance development in bacteria has been creating difficulties in curing infections with traditional antibiotics. The use of bacteriocins could shift some of the resistance pressure creating an alternative treatment. The bacteriocins act as bactericidal peptides through pore formation and interference with intracellular enzymatic reactions of specific target bacteria. We, and <a target="blank" href="https://2016.igem.org/Team:Stockholm">the iGEM team of Stockholm</a>, performed a <a target="blank" href="https://2016.igem.org/Team:SDU-Denmark/Demonstrate#effect">MIC-test</a> to observe the effect of our bacteriocins towards resistant bacteria. According to the test, the bacteriocins were proven to be quite effective.  <a href="https://2016.igem.org/Team:SDU-Denmark/Bacteriocins"> For further information about bacteriocins, read here</a>.  </p><br>
  
<p> <img src="https://static.igem.org/mediawiki/2016/4/45/T--SDU-Denmark--minisilk.png" width="5%" style="display:inline-block;margin-right:5px;">The <a target="blank" href="https://2016.igem.org/Team:SDU-Denmark/Silk">spider silk</a> is chosen due to its angiogenic properties and proliferative effect on keratinocytes (skin cells), which is not seen in the traditional used gauze. We tried to synthesize the silk with the help of the protocols provided by the <a target="blank" href="https://2015.igem.org/Team:UCLA">2015 iGEM team from UCLA</a>. We would also have liked to make hybrid silk, which consists of bacteriocins and spider silk with the same method.</p><br>
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<p> <img src="https://static.igem.org/mediawiki/2016/4/45/T--SDU-Denmark--minisilk.png" width="5%" style="display:inline-block;margin-right:5px;">The spidersilk is chosen due to its angiogenic properties and proliferative effect on keratinocytes (skin cells), which is not seen in the traditional used gauze. We tried to synthesize the silk with the help of the protocols provided by the <a target="blank" href="https://2015.igem.org/Team:UCLA">2015 iGEM team from UCLA</a>. We would also have liked to make hybrid silk, which consists of bacteriocins and spider silk with the same method. <a href="https://2016.igem.org/Team:SDU-Denmark/Silk"> For further information about the spidersilk, read here</a>. </p><br>
  
 
<p> <img src="https://static.igem.org/mediawiki/2016/8/87/T--SDU-Denmark--miniPHB.png" width="5%" style="display:inline-block;margin-right:5px;">The <a target="blank" href="https://2016.igem.org/Team:SDU-Denmark/PHB">biodegradable plastic (PHB)</a> is a synthezised poly-β-hydroxy butyrate polymer that is non-toxic and has a high oxygen-permeability <span class="tooltip"><span class="tooltiptext"><a target="blank" href="2016.igem.org/Team:SDU-Denmark/Attributions#articles">JAMBUNATHAN, P. & ZHANG, K. C. 2016. Engineered biosynthesis of biodegradable polymers. <i>Journal of Industrial Microbiology & Biotechnology</i>, 43, 1037-1058.</a><</span></span>. By introducing a PHB secretion system into an <i>E. coli</i> plasmid we can increase the yield from existing plastic producing BioBricks. We have made enough PHB to 3D print.</p><br>
 
<p> <img src="https://static.igem.org/mediawiki/2016/8/87/T--SDU-Denmark--miniPHB.png" width="5%" style="display:inline-block;margin-right:5px;">The <a target="blank" href="https://2016.igem.org/Team:SDU-Denmark/PHB">biodegradable plastic (PHB)</a> is a synthezised poly-β-hydroxy butyrate polymer that is non-toxic and has a high oxygen-permeability <span class="tooltip"><span class="tooltiptext"><a target="blank" href="2016.igem.org/Team:SDU-Denmark/Attributions#articles">JAMBUNATHAN, P. & ZHANG, K. C. 2016. Engineered biosynthesis of biodegradable polymers. <i>Journal of Industrial Microbiology & Biotechnology</i>, 43, 1037-1058.</a><</span></span>. By introducing a PHB secretion system into an <i>E. coli</i> plasmid we can increase the yield from existing plastic producing BioBricks. We have made enough PHB to 3D print.</p><br>

Revision as of 11:19, 19 October 2016

Description


Bacto-Aid

Our project faces the growing problems of both plastic pollution and the evolution of antibiotic resistant bacterias. Bacto-Aid is a sustainable concept with bacteria aiding us. We focused on producing a bandage, which consists of recombinant spider silk integrated with antimicrobial peptides, making it preventive towards infections. The plastic of which we wish to attach the spider silk, is biodegradable and produced in the lab as well.


The bacteriocins are the antimicrobial peptides in our hybrid silk. Resistance development in bacteria has been creating difficulties in curing infections with traditional antibiotics. The use of bacteriocins could shift some of the resistance pressure creating an alternative treatment. The bacteriocins act as bactericidal peptides through pore formation and interference with intracellular enzymatic reactions of specific target bacteria. We, and the iGEM team of Stockholm, performed a MIC-test to observe the effect of our bacteriocins towards resistant bacteria. According to the test, the bacteriocins were proven to be quite effective. For further information about bacteriocins, read here.


The spidersilk is chosen due to its angiogenic properties and proliferative effect on keratinocytes (skin cells), which is not seen in the traditional used gauze. We tried to synthesize the silk with the help of the protocols provided by the 2015 iGEM team from UCLA. We would also have liked to make hybrid silk, which consists of bacteriocins and spider silk with the same method. For further information about the spidersilk, read here.


The biodegradable plastic (PHB) is a synthezised poly-β-hydroxy butyrate polymer that is non-toxic and has a high oxygen-permeability JAMBUNATHAN, P. & ZHANG, K. C. 2016. Engineered biosynthesis of biodegradable polymers. Journal of Industrial Microbiology & Biotechnology, 43, 1037-1058.<. By introducing a PHB secretion system into an E. coli plasmid we can increase the yield from existing plastic producing BioBricks. We have made enough PHB to 3D print.


This project was chosen due to the interest in synthetic spider silk. An article of interest that concluded antimicrobial effect of fused synthetic spider silk to human defenses became the pillar of our project Gomes, Silvia C, Isabel B Leonor, Joao F Mano, Rui L Reis og David L Kaplan (2011). “Antimicrobial functionalized gene- tically engineered spider silk.” eng. I: Bio- materials 32.18, s. 4255–4266. issn: 1878- 5905<. The idea of making PHB a part of our project as the plastic in the bandage, evolved from the desire to have an influence on solving the growing problem of plastic pollution. Bacto-Aid was the perfect project to make our two wishes come to life.


In the field of science, scientific reproduction is one of the most important aspects when confirming a hypothesis or theory. iGEM follows this specific scientific virtue by making it a part of both the bronze and gold criteria: the demands imply working with other team’s work. We took it further trying to reproduce parts of earlier iGEM team’s work: the 2015 UCLA team, the 2012 Tokyo Tech team, the 2013 Imperial College London and the 2015 Standford Brown team.

Why should consumers care?
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When designing our Bacto-Aid, it was important for us to ensure that Bacto-Aid consists of sustainable and renewable materials. The following survey shows, that Environmental friendly products are favored by 75 % of the consumers. With this in mind, our product satisfy the general opinion of the consumers.