|
|
Line 44: |
Line 44: |
| } | | } |
| | | |
− | #accordion .ui-accordion-content p, #accordion .ui-accordion-content .tabs { | + | #accordion .ui-accordion-content .p, #accordion .ui-accordion-content .tabs { |
| margin: 0.8rem 1.6rem; | | margin: 0.8rem 1.6rem; |
| padding: 0; | | padding: 0; |
| } | | } |
| | | |
− | #accordion .ui-accordion-content p { | + | #accordion .ui-accordion-content .p { |
| text-align: left; | | text-align: left; |
| } | | } |
Line 474: |
Line 474: |
| </header> | | </header> |
| <div class="article-body"> | | <div class="article-body"> |
− | <p> | + | <div class="p"> |
| In order to make sure our "consumer" efficient, we should first knock out the <i>luxS</i> gene in our engineering bacteria GR286(a simplified strain of <i>Bacillus amyloliquefaciens</i> LL3). We used a markerless gene replacement method to knock out the <i>luxS</i> gene. | | In order to make sure our "consumer" efficient, we should first knock out the <i>luxS</i> gene in our engineering bacteria GR286(a simplified strain of <i>Bacillus amyloliquefaciens</i> LL3). We used a markerless gene replacement method to knock out the <i>luxS</i> gene. |
− | </p> | + | </div> |
| <div class="tabs" id="tabs1"> | | <div class="tabs" id="tabs1"> |
| <ul> | | <ul> |
Line 484: |
Line 484: |
| </ul> | | </ul> |
| <div id="fragment1-1"> | | <div id="fragment1-1"> |
− | <p> | + | <div class="p"> |
| Construction of targeting vector : the upstream and downstream of <i>luxS</i> gene were combined by over-lapping PCR and ligated into plasmid pKSU. | | Construction of targeting vector : the upstream and downstream of <i>luxS</i> gene were combined by over-lapping PCR and ligated into plasmid pKSU. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment1-2"> | | <div id="fragment1-2"> |
− | <p> | + | <div class="p"> |
| Transformed pKSU-Δ<i>luxS</i> into GR286, and selected out positive clones. | | Transformed pKSU-Δ<i>luxS</i> into GR286, and selected out positive clones. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table1-2-1"> | | <table class="table-theme-1" id="table1-2-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 558: |
Line 558: |
| </div> | | </div> |
| <div id="fragment1-3"> | | <div id="fragment1-3"> |
− | <p> | + | <div class="p"> |
| The transformants were cultured at 42℃ with chloramphenicol to select single-crossover clones. | | The transformants were cultured at 42℃ with chloramphenicol to select single-crossover clones. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table1-3-1"> | | <table class="table-theme-1" id="table1-3-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 643: |
Line 643: |
| </ul> | | </ul> |
| <div id="fragment2-1"> | | <div id="fragment2-1"> |
− | <p> | + | <div class="p"> |
| The single-crossover strains were then cultured at LB medium and passaged every 12 hours for 4 generation. | | The single-crossover strains were then cultured at LB medium and passaged every 12 hours for 4 generation. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment2-2"> | | <div id="fragment2-2"> |
− | <p> | + | <div class="p"> |
| Cultured the last generation at medium with 5-fluorouracil to select double-crossover clones. Regretfully, we didn't get the double-crossover clones. | | Cultured the last generation at medium with 5-fluorouracil to select double-crossover clones. Regretfully, we didn't get the double-crossover clones. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table2-2-1"> | | <table class="table-theme-1" id="table2-2-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 735: |
Line 735: |
| </ul> | | </ul> |
| <div id="fragment3-1"> | | <div id="fragment3-1"> |
− | <p> | + | <div class="p"> |
| We cultured transformants at 42℃ with chloramphenicol again and selected the single-crossover clones successfully. | | We cultured transformants at 42℃ with chloramphenicol again and selected the single-crossover clones successfully. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table3-1-1"> | | <table class="table-theme-1" id="table3-1-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 807: |
Line 807: |
| </div> | | </div> |
| <div id="fragment3-2"> | | <div id="fragment3-2"> |
− | <p> | + | <div class="p"> |
| The single-crossover strains were then cultured at LB medium and passaged every 12 hours for 4 generations. | | The single-crossover strains were then cultured at LB medium and passaged every 12 hours for 4 generations. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment3-3"> | | <div id="fragment3-3"> |
− | <p> | + | <div class="p"> |
| Cultured the last generation at medium with 5-fluorouracil to select double-crossover clones. We finally got our aimed strain—GR286Δ<i>luxS</i>. | | Cultured the last generation at medium with 5-fluorouracil to select double-crossover clones. We finally got our aimed strain—GR286Δ<i>luxS</i>. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table3-3-1"> | | <table class="table-theme-1" id="table3-3-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 900: |
Line 900: |
| </ul> | | </ul> |
| <div id="fragment4-1"> | | <div id="fragment4-1"> |
− | <p> | + | <div class="p"> |
| Cultured the GR286Δ<i>luxS</i> strain and made it competence for future use. | | Cultured the GR286Δ<i>luxS</i> strain and made it competence for future use. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment4-2"> | | <div id="fragment4-2"> |
− | <p> | + | <div class="p"> |
| Cloned the <i>lsrACDB</i> gene from <i>Bacillus thuringiensis</i> and ligated it to T-vector. | | Cloned the <i>lsrACDB</i> gene from <i>Bacillus thuringiensis</i> and ligated it to T-vector. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table4-2-1"> | | <table class="table-theme-1" id="table4-2-1"> |
| <caption>50μL PCR system X2</caption> | | <caption>50μL PCR system X2</caption> |
Line 1,000: |
Line 1,000: |
| </div> | | </div> |
| <div id="fragment4-3"> | | <div id="fragment4-3"> |
− | <p> | + | <div class="p"> |
| Transformed the T-<i>lsrACDB</i> into DH5α and coated plate, and then selected positive clones by colony PCR. | | Transformed the T-<i>lsrACDB</i> into DH5α and coated plate, and then selected positive clones by colony PCR. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table4-3-1"> | | <table class="table-theme-1" id="table4-3-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 1,072: |
Line 1,072: |
| </div> | | </div> |
| <div id="fragment4-4"> | | <div id="fragment4-4"> |
− | <p> | + | <div class="p"> |
| After restriction enzyme digestion verification, we sent them to sequencing. Unfortunately, the sequencing result showed some mutations in cloning gene. | | After restriction enzyme digestion verification, we sent them to sequencing. Unfortunately, the sequencing result showed some mutations in cloning gene. |
− | </p> | + | </div> |
| <table class="table-theme-4" id="table4-4-1"> | | <table class="table-theme-4" id="table4-4-1"> |
| <caption>20μL digestion system</caption> | | <caption>20μL digestion system</caption> |
Line 1,110: |
Line 1,110: |
| </div> | | </div> |
| <div id="fragment4-5"> | | <div id="fragment4-5"> |
− | <p> | + | <div class="p"> |
| We repeated the process of gene cloning but there were still some mutations. | | We repeated the process of gene cloning but there were still some mutations. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment4-6"> | | <div id="fragment4-6"> |
− | <p> | + | <div class="p"> |
| We finally decided to request the gene company to synthesize the lsrACDB gene. | | We finally decided to request the gene company to synthesize the lsrACDB gene. |
− | </p> | + | </div> |
| </div> | | </div> |
| </div> | | </div> |
Line 1,126: |
Line 1,126: |
| </header> | | </header> |
| <div class="article-body"> | | <div class="article-body"> |
− | <p> | + | <div class="p"> |
| This week, we started to construct another controller―supplier. | | This week, we started to construct another controller―supplier. |
− | </p> | + | </div> |
| <div class="tabs" id="tabs5"> | | <div class="tabs" id="tabs5"> |
| <ul> | | <ul> |
Line 1,137: |
Line 1,137: |
| </ul> | | </ul> |
| <div id="fragment5-1"> | | <div id="fragment5-1"> |
− | <p> | + | <div class="p"> |
| We cloned a strong promoter <i>C2</i> from former kit and cloned <i>luxS</i> gene from GR286. | | We cloned a strong promoter <i>C2</i> from former kit and cloned <i>luxS</i> gene from GR286. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table5-1-1"> | | <table class="table-theme-1" id="table5-1-1"> |
| <caption>50μL PCR system X2</caption> | | <caption>50μL PCR system X2</caption> |
Line 1,273: |
Line 1,273: |
| </div> | | </div> |
| <div id="fragment5-2"> | | <div id="fragment5-2"> |
− | <p> | + | <div class="p"> |
| Fuse the two segments together by fusion PCR, and ligated it into T-vector. Then, transformed the vector into DH5α. | | Fuse the two segments together by fusion PCR, and ligated it into T-vector. Then, transformed the vector into DH5α. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table5-2-1"> | | <table class="table-theme-1" id="table5-2-1"> |
| <caption>50μL PCR system X2</caption> | | <caption>50μL PCR system X2</caption> |
Line 1,372: |
Line 1,372: |
| </div> | | </div> |
| <div id="fragment5-3"> | | <div id="fragment5-3"> |
− | <p> | + | <div class="p"> |
| Selected the positive clones by colony PCR. | | Selected the positive clones by colony PCR. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table5-3-1"> | | <table class="table-theme-1" id="table5-3-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 1,443: |
Line 1,443: |
| </div> | | </div> |
| <div id="fragment5-4"> | | <div id="fragment5-4"> |
− | <p> | + | <div class="p"> |
| We chose 4 positive strains to culture overnight and extracted the plasmid. After restriction enzyme digestion verification, we sent them to sequencing. | | We chose 4 positive strains to culture overnight and extracted the plasmid. After restriction enzyme digestion verification, we sent them to sequencing. |
− | </p> | + | </div> |
| <table class="table-theme-4" id="table5-4-1"> | | <table class="table-theme-4" id="table5-4-1"> |
| <caption>20μL digestion system</caption> | | <caption>20μL digestion system</caption> |
Line 1,497: |
Line 1,497: |
| </ul> | | </ul> |
| <div id="fragment6-1"> | | <div id="fragment6-1"> |
− | <p> | + | <div class="p"> |
| The sequencing result showed there's a correct strain. So we can use the strain for the following experiment. We obtained the correct plasmid T-<i>C2-luxS</i> from DH5α. Then we got the fragment <i>C2-luxS</i> by digestion and gel extraction. | | The sequencing result showed there's a correct strain. So we can use the strain for the following experiment. We obtained the correct plasmid T-<i>C2-luxS</i> from DH5α. Then we got the fragment <i>C2-luxS</i> by digestion and gel extraction. |
− | </p> | + | </div> |
| <table class="table-theme-4" id="table6-1-1"> | | <table class="table-theme-4" id="table6-1-1"> |
| <caption>40μL digestion system</caption> | | <caption>40μL digestion system</caption> |
Line 1,529: |
Line 1,529: |
| </div> | | </div> |
| <div id="fragment6-2"> | | <div id="fragment6-2"> |
− | <p> | + | <div class="p"> |
| Ligated the <i>C2-luxS</i> to linearized plasmid pWH1520, and transformed it into DH5α. | | Ligated the <i>C2-luxS</i> to linearized plasmid pWH1520, and transformed it into DH5α. |
− | </p> | + | </div> |
| <table class="table-theme-3" id="table6-2-1"> | | <table class="table-theme-3" id="table6-2-1"> |
| <caption>20μL ligation system</caption> | | <caption>20μL ligation system</caption> |
Line 1,564: |
Line 1,564: |
| </div> | | </div> |
| <div id="fragment6-3"> | | <div id="fragment6-3"> |
− | <p> | + | <div class="p"> |
| Extracted the plasmid pWH-<i>C2-luxS</i> from DH5α. To prevent the plasmid from DAM&DCM methylation, we transformed it into <i>E.coli</i> JM110. | | Extracted the plasmid pWH-<i>C2-luxS</i> from DH5α. To prevent the plasmid from DAM&DCM methylation, we transformed it into <i>E.coli</i> JM110. |
− | </p> | + | </div> |
| </div> | | </div> |
| <div id="fragment6-4"> | | <div id="fragment6-4"> |
− | <p> | + | <div class="p"> |
| Extracted the plasmid pWH-<i>C2-luxS</i> from JM110,and dealt with it by BamH Ⅰ methylase. | | Extracted the plasmid pWH-<i>C2-luxS</i> from JM110,and dealt with it by BamH Ⅰ methylase. |
− | </p> | + | </div> |
| <table class="table-theme-5" id="table6-4-1"> | | <table class="table-theme-5" id="table6-4-1"> |
| <caption>100μL methylation system</caption> | | <caption>100μL methylation system</caption> |
Line 1,604: |
Line 1,604: |
| </div> | | </div> |
| <div id="fragment6-5"> | | <div id="fragment6-5"> |
− | <p> | + | <div class="p"> |
| Transformed the plasmid into GR286 by electroporation.[Failed] | | Transformed the plasmid into GR286 by electroporation.[Failed] |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/e/e0/T--NKU_China--notebook-6-13-1.png" width="347" height="284"> | | <img src="https://static.igem.org/mediawiki/2016/e/e0/T--NKU_China--notebook-6-13-1.png" width="347" height="284"> |
Line 1,631: |
Line 1,631: |
| </ul> | | </ul> |
| <div id="fragment7-1"> | | <div id="fragment7-1"> |
− | <p> | + | <div class="p"> |
| This week, we tried to use different voltages to transform the plasmid. Sadly, all of these tries got bad results. | | This week, we tried to use different voltages to transform the plasmid. Sadly, all of these tries got bad results. |
− | </p> | + | </div> |
| | | |
| </div> | | </div> |
| <div id="fragment7-2"> | | <div id="fragment7-2"> |
− | <p> | + | <div class="p"> |
| We considered whether the <i>luxS</i> gene is a little toxic for GR286, and the bacteria tends to refuse the gene when we added a strong promoter in front of it. So, we planned to use induced expression to reconstruction our expression vector. | | We considered whether the <i>luxS</i> gene is a little toxic for GR286, and the bacteria tends to refuse the gene when we added a strong promoter in front of it. So, we planned to use induced expression to reconstruction our expression vector. |
− | </p> | + | </div> |
| | | |
| </div> | | </div> |
| <div id="fragment7-3"> | | <div id="fragment7-3"> |
− | <p> | + | <div class="p"> |
| The plasmid pWH1520 contains the strong <i>xylA</i> promoter originating, and transcription from this promoter is xylose inducible. So, the gene of interest carries its own ribosome binding sequence (RBS) and translation initiation codon. Based on these points, we redesigned primers. | | The plasmid pWH1520 contains the strong <i>xylA</i> promoter originating, and transcription from this promoter is xylose inducible. So, the gene of interest carries its own ribosome binding sequence (RBS) and translation initiation codon. Based on these points, we redesigned primers. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/e/eb/T--NKU_China--notebook-6-13-2.png" width="654" height="652"> | | <img src="https://static.igem.org/mediawiki/2016/e/eb/T--NKU_China--notebook-6-13-2.png" width="654" height="652"> |
Line 1,668: |
Line 1,668: |
| </ul> | | </ul> |
| <div id="fragment8-1"> | | <div id="fragment8-1"> |
− | <p> | + | <div class="p"> |
| We cloned <i>luxS</i> gene from GR286 using our new primers. | | We cloned <i>luxS</i> gene from GR286 using our new primers. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table8-1-1"> | | <table class="table-theme-1" id="table8-1-1"> |
| <caption>50μL PCR system X2</caption> | | <caption>50μL PCR system X2</caption> |
Line 1,739: |
Line 1,739: |
| </div> | | </div> |
| <div id="fragment8-2"> | | <div id="fragment8-2"> |
− | <p> | + | <div class="p"> |
| Purified the <i>luxS</i> fragment by gel extraction, and ligated it into linearized pWH1520. Then, transformed the vector into DH5α. | | Purified the <i>luxS</i> fragment by gel extraction, and ligated it into linearized pWH1520. Then, transformed the vector into DH5α. |
− | </p> | + | </div> |
| <table class="table-theme-4" id="table8-2-1"> | | <table class="table-theme-4" id="table8-2-1"> |
| <caption>40μL digestion system X2</caption> | | <caption>40μL digestion system X2</caption> |
Line 1,800: |
Line 1,800: |
| </div> | | </div> |
| <div id="fragment8-3"> | | <div id="fragment8-3"> |
− | <p> | + | <div class="p"> |
| Selected the positive clones by colony PCR. | | Selected the positive clones by colony PCR. |
− | </p> | + | </div> |
| <table class="table-theme-1" id="table8-3-1"> | | <table class="table-theme-1" id="table8-3-1"> |
| <caption>20μL PCR system</caption> | | <caption>20μL PCR system</caption> |
Line 1,870: |
Line 1,870: |
| </div> | | </div> |
| <div id="fragment8-4"> | | <div id="fragment8-4"> |
− | <p> | + | <div class="p"> |
| We chose 4 positive strains to culture overnight and extracted the plasmid. After restriction enzyme digestion verification, we sent them to sequencing. | | We chose 4 positive strains to culture overnight and extracted the plasmid. After restriction enzyme digestion verification, we sent them to sequencing. |
− | </p> | + | </div> |
| <table class="table-theme-4" id="table8-4-1"> | | <table class="table-theme-4" id="table8-4-1"> |
| <caption>20μL digestion system</caption> | | <caption>20μL digestion system</caption> |
Line 1,923: |
Line 1,923: |
| </ul> | | </ul> |
| <div id="fragment9-1"> | | <div id="fragment9-1"> |
− | <p> | + | <div class="p"> |
| The sequencing result showed there's three correct strains. So we can choose a correct strain for the following experiment. We extracted the correct plasmid pWH-<i>luxS</i> from DH5α. To prevent the plasmid from DAM&DCM methylation, we transformed it into E.coli JM110. | | The sequencing result showed there's three correct strains. So we can choose a correct strain for the following experiment. We extracted the correct plasmid pWH-<i>luxS</i> from DH5α. To prevent the plasmid from DAM&DCM methylation, we transformed it into E.coli JM110. |
− | </p> | + | </div> |
| | | |
| </div> | | </div> |
| <div id="fragment9-2"> | | <div id="fragment9-2"> |
− | <p> | + | <div class="p"> |
| Extracted the plasmid pWH -<i>luxS</i> from JM110,and dealt with it by BamH Ⅰ methylase. | | Extracted the plasmid pWH -<i>luxS</i> from JM110,and dealt with it by BamH Ⅰ methylase. |
− | </p> | + | </div> |
| <table class="table-theme-5" id="table6-4-1"> | | <table class="table-theme-5" id="table6-4-1"> |
| <caption>100μL methylation system</caption> | | <caption>100μL methylation system</caption> |
Line 1,964: |
Line 1,964: |
| </div> | | </div> |
| <div id="fragment9-3"> | | <div id="fragment9-3"> |
− | <p> | + | <div class="p"> |
| Transformed the plasmid into GR286 by electroporation, and selected positive clones. | | Transformed the plasmid into GR286 by electroporation, and selected positive clones. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/a/aa/T--NKU_China--notebook-6-13-6.png" width="347" height="284"> | | <img src="https://static.igem.org/mediawiki/2016/a/aa/T--NKU_China--notebook-6-13-6.png" width="347" height="284"> |
Line 1,975: |
Line 1,975: |
| </div> | | </div> |
| </div> | | </div> |
− | <p> | + | <div class="p"> |
| The construction of supplier was complished! | | The construction of supplier was complished! |
− | </p> | + | </div> |
| </div> | | </div> |
| </article> | | </article> |
Line 1,991: |
Line 1,991: |
| </ul> | | </ul> |
| <div id="fragment10-1"> | | <div id="fragment10-1"> |
− | <p> | + | <div class="p"> |
| Our synthetic <i>lsrACDB</i> gene came back. We first used restriction-ligation method to ligate <i>lsrACDB</i> to plasmid pWH1520, but we failed to select positive after several tries. | | Our synthetic <i>lsrACDB</i> gene came back. We first used restriction-ligation method to ligate <i>lsrACDB</i> to plasmid pWH1520, but we failed to select positive after several tries. |
− | </p> | + | </div> |
| <table class="table-theme-3" id="table10-1-1"> | | <table class="table-theme-3" id="table10-1-1"> |
| <caption>20μL ligation system</caption> | | <caption>20μL ligation system</caption> |
Line 2,026: |
Line 2,026: |
| </div> | | </div> |
| <div id="fragment10-2"> | | <div id="fragment10-2"> |
− | <p> | + | <div class="p"> |
| Considering the <i>lsrACDB</i> gene is a large fragment (4500bp), we used ClonExpress technique cloning the gene again to improve the efficiency of ligation. We divided the <i>lsrACDB</i> sequence into two parts and cloned them separately. Then we ligated the two segments to the plasmid pWH1520 and transformed it into DH5α. After that, we used PCR to select the positive clones. However, we didn't get a good result. | | Considering the <i>lsrACDB</i> gene is a large fragment (4500bp), we used ClonExpress technique cloning the gene again to improve the efficiency of ligation. We divided the <i>lsrACDB</i> sequence into two parts and cloned them separately. Then we ligated the two segments to the plasmid pWH1520 and transformed it into DH5α. After that, we used PCR to select the positive clones. However, we didn't get a good result. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/1/17/T--NKU_China--notebook-6-13-7.png" width="285" height="207"> | | <img src="https://static.igem.org/mediawiki/2016/1/17/T--NKU_China--notebook-6-13-7.png" width="285" height="207"> |
Line 2,045: |
Line 2,045: |
| </header> | | </header> |
| <div class="article-body"> | | <div class="article-body"> |
− | <p> | + | <div class="p"> |
| We learnt a new method called circular polymerase extension cloning (CPEC) for high-throughput cloning of complex and combinatorial DNA libraries, and we decided to use this method to try ligating our <i>lsrACDB</i> gene. It's encouraging that we succeeded to ligate the <i>lsrACDB</i> gene to the plasmid pHT-01. | | We learnt a new method called circular polymerase extension cloning (CPEC) for high-throughput cloning of complex and combinatorial DNA libraries, and we decided to use this method to try ligating our <i>lsrACDB</i> gene. It's encouraging that we succeeded to ligate the <i>lsrACDB</i> gene to the plasmid pHT-01. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/c/c2/T--NKU_China--notebook-6-13-8.png" width="396" height="322"> | | <img src="https://static.igem.org/mediawiki/2016/c/c2/T--NKU_China--notebook-6-13-8.png" width="396" height="322"> |
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| </ul> | | </ul> |
| <div id="fragment12-1"> | | <div id="fragment12-1"> |
− | <p> | + | <div class="p"> |
| Since we have constructed "supplier" and part of "consumer", we decided to measure the growth curve to explore the function of our "controller". | | Since we have constructed "supplier" and part of "consumer", we decided to measure the growth curve to explore the function of our "controller". |
− | </p> | + | </div> |
| <table class="table-theme-6" id="table12-1-1"> | | <table class="table-theme-6" id="table12-1-1"> |
| <caption>Groups divided in this experiment</caption> | | <caption>Groups divided in this experiment</caption> |
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| </div> | | </div> |
| <div id="fragment12-2"> | | <div id="fragment12-2"> |
− | <p> | + | <div class="p"> |
| Cultured media of our supplier was tested for the presence of AI-2 by inducing luminescence in <i>Vibrio harveyi</i> reporter strain BB170. | | Cultured media of our supplier was tested for the presence of AI-2 by inducing luminescence in <i>Vibrio harveyi</i> reporter strain BB170. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/a/a4/T--NKU_China--notebook-6-13-14.png" width="485" height="341"> | | <img src="https://static.igem.org/mediawiki/2016/a/a4/T--NKU_China--notebook-6-13-14.png" width="485" height="341"> |
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| </ul> | | </ul> |
| <div id="fragment12-1"> | | <div id="fragment12-1"> |
− | <p> | + | <div class="p"> |
| For our consumer, we should also clone the <i>lsrK</i> and <i>lsrFG</i> gene for phosphorylating and degrading AI-2. We used ClonExpress technique cloning the two genes and ligated them to plasmid pHT-01 successfully. | | For our consumer, we should also clone the <i>lsrK</i> and <i>lsrFG</i> gene for phosphorylating and degrading AI-2. We used ClonExpress technique cloning the two genes and ligated them to plasmid pHT-01 successfully. |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/c/c5/T--NKU_China--notebook-6-13-16.png" width="429" height="320"> | | <img src="https://static.igem.org/mediawiki/2016/c/c5/T--NKU_China--notebook-6-13-16.png" width="429" height="320"> |
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| </div> | | </div> |
| <div id="fragment12-2"> | | <div id="fragment12-2"> |
− | <p> | + | <div class="p"> |
| We cocultured the supplier with BB170 and tested the fluoresent intensity to explore the function of supplier. (negative result) | | We cocultured the supplier with BB170 and tested the fluoresent intensity to explore the function of supplier. (negative result) |
− | </p> | + | </div> |
| <figure> | | <figure> |
| <img src="https://static.igem.org/mediawiki/2016/f/f1/T--NKU_China--notebook-6-13-17.png" width="424" height="272"> | | <img src="https://static.igem.org/mediawiki/2016/f/f1/T--NKU_China--notebook-6-13-17.png" width="424" height="272"> |