Difference between revisions of "Team:Arizona State/Parts"
| Line 6: | Line 6: | ||
<p>Our team submitted a total of 6 parts to the iGEM registry. The parts that were submitted were all components to N-acyl homoserine lactone (AHL) quorum sensing systems. The parts are all RFC10, 23, and 1000 compatible with some parts possessing other compatibilities. There are 5 basic parts that are part of the part collection and 1 composite part. The senders for the Aub, Bja, Bra, Cer, and Sin systems were submitted as part of the inductance test with the F2620 part, and compose a submitted part collection. The 1 composite part is the modular cassette (vector) for the inducer. </p> | <p>Our team submitted a total of 6 parts to the iGEM registry. The parts that were submitted were all components to N-acyl homoserine lactone (AHL) quorum sensing systems. The parts are all RFC10, 23, and 1000 compatible with some parts possessing other compatibilities. There are 5 basic parts that are part of the part collection and 1 composite part. The senders for the Aub, Bja, Bra, Cer, and Sin systems were submitted as part of the inductance test with the F2620 part, and compose a submitted part collection. The 1 composite part is the modular cassette (vector) for the inducer. </p> | ||
<h2>Our Favorite Parts</h2><hr> | <h2>Our Favorite Parts</h2><hr> | ||
| − | <h3><a href"http://parts.igem.org/Part:BBa_K2033011">BBa_K2033000</a></h3> | + | <h3><a href"http://parts.igem.org/Part:BBa_K2033011">BBa_K2033000</a>:N-dodecanoyl-L-homoserine lactone (C(12)-HSL) Sender- AubI</h3> |
| − | <h3><a href"http://parts.igem.org/Part:BBa_K2033011">BBa_K2033011</a></h3> | + | <h3><a href"http://parts.igem.org/Part:BBa_K2033011">BBa_K2033011</a>:N-Acyl Homoserine Lactone (AHL) Modular Sender Vector </h3> |
</div> | </div> | ||
<div class="container"> | <div class="container"> | ||
Revision as of 19:40, 15 October 2016
Parts
Overview of Parts
Our team submitted a total of 6 parts to the iGEM registry. The parts that were submitted were all components to N-acyl homoserine lactone (AHL) quorum sensing systems. The parts are all RFC10, 23, and 1000 compatible with some parts possessing other compatibilities. There are 5 basic parts that are part of the part collection and 1 composite part. The senders for the Aub, Bja, Bra, Cer, and Sin systems were submitted as part of the inductance test with the F2620 part, and compose a submitted part collection. The 1 composite part is the modular cassette (vector) for the inducer.
Our Favorite Parts
BBa_K2033000:N-dodecanoyl-L-homoserine lactone (C(12)-HSL) Sender- AubI
BBa_K2033011:N-Acyl Homoserine Lactone (AHL) Modular Sender Vector
Quorum Sensing-F2620 Inductions
The part Bba_F2620 (found here), designed by Barry Canton and Anna Labno from MIT, is a device designed to output PoPs when LuxR is activated. This was used by the ASU team to test interactions between inducers from other quorum sensing systems. The Aub, Bja, Bra, Cer, and Sin systems stem from different organisms and their inducers were submitted as parts to the registry with the purpose of completing this induction test. With very few Senders currently found in the registry (only around 7), the addition of 5 Senders adds significant depth to the Sender pool.
Each Sender may also be referred to as an AHL synthase, as it produces a specific AHL. The 3D structures of the AHLs produced by the systems we examined are found in the Project Description.
Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <groupparts> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.
Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.
