Alexandra m (Talk | contribs) |
|||
Line 17: | Line 17: | ||
<div class="col-sm-12"> | <div class="col-sm-12"> | ||
<div class="banner_title" > | <div class="banner_title" > | ||
− | <h1>Protocol 8</h1> | + | <h1 id=back_to_the_top">Protocol 8</h1> |
</div> | </div> | ||
Line 249: | Line 249: | ||
<div class="scroll_area"> | <div class="scroll_area"> | ||
<div class="sroll_top"> | <div class="sroll_top"> | ||
− | <a href="# | + | <a href="#back_to_the_top"> <i class="zmdi zmdi-chevron-up btn waves-effect"> </i> </a> |
</div> | </div> | ||
</div> | </div> |
Revision as of 20:45, 16 October 2016
Realize a mix by adding the following component in a 1,5mL Eppendorf tube. 50µL of mix must be made per desired PCR reaction) Add 50µL of the mix in each 0,2mL PCR tubes. Lid Temperature: 95°C Initial denaturation : 95°C 5 min 25 cycles of : Final extension : 68°C for 5 min Hold at 4°C *precise Tm for each primer Gel purification : Run samples on an electrophoresis gel to check cloning efficiency. Realize a bacterial miniculture of the colony with satisfying PCR results. Inoculate the colony grown on the divided into square petri dish into a 50mL Falcon tube with 5mL LB + appropriate antibiotic (chloramphenicol at 25µg/mL).
Protocol 8 : Colony PCR
Aim: DNA Fragment amplification from bacteria colonies
NB : All components must be vortexed before use
Component Final concentration
Nuclease-free water
10X Standard Taq reaction Buffer 1X
10mM dNTPs 200µM
10µM Forward primer 0.2µM (0.05-1µM)
10µM Reverse primer 0.2µM (0.05-1µM)
Taq polymerase 5 units/50µL PCR
Pick a colony, add a stab of it into a PCR tube and put the rest of the colony on a new annotated and divided into square petri dish
Gently mix and spin down microcentrifuge PCR tubes.
Transfer PCR tubes to a PCR machine with the block preheated to 95°C
Set the following parameters for the PCR reaction :
- 95°C 30 s
- Tm* 1 min
- 68°C; 1 min per kB (amplification)
See the appropriate protocol (Protocol 3 : Electrophoresis )
This will serve for the subsequent miniprep. See the appropriate protocol (Protocol 9 : Miniprep )