Difference between revisions of "Team:Ionis Paris/GLuc"

Line 162: Line 162:
 
         <!-- ====END BLOG TABLE==== -->
 
         <!-- ====END BLOG TABLE==== -->
 
          
 
          
        <!-- ====START SOCIAL Link==== -->
+
    <!-- ====START SOCIAL Link==== -->
        <div class="footer_social">
+
    <div class="footer_social">
            <div class="container-fluid">
+
        <div class="container-fluid">
                <div class="row">
+
            <div class="row">
                    <ul class="ft_top clearfix">
+
                <ul class="ft_top clearfix">
                        <li class="waves-effect waves-light">
+
                    <li class="waves-effect waves-light">
                            <a href="https://www.facebook.com/ionisigem/?fref=ts" target="_blank">
+
                        <a href="https://www.facebook.com/ionisigem/?fref=ts" target="_blank">
                                <i class="zmdi zmdi-facebook "></i>Facebook
+
                            <i class="zmdi zmdi-facebook "></i>Facebook
                            </a>
+
                        </a>
                        </li>  
+
                    </li>
                        <li class="waves-effect waves-light">
+
                    <li class="waves-effect waves-light">
                            <a href="https://twitter.com/igem_ionis" target="_blank">
+
                        <a href="https://twitter.com/igem_ionis" target="_blank">
                                <i class="zmdi zmdi-twitter"></i>Twitter
+
                            <i class="zmdi zmdi-twitter"></i>Twitter
                            </a>
+
                        </a>
                        </li>  
+
                    </li>
                        <li class="waves-effect waves-light">
+
                    <li class="waves-effect waves-light">
                            <a href="https://www.youtube.com/channel/UC0RyQsB5YpweSRBYQlAdZDA" target="_blank">
+
                        <a href="https://www.youtube.com/channel/UC0RyQsB5YpweSRBYQlAdZDA" target="_blank">
                                <i class="zmdi zmdi-youtube"></i>youtube
+
                            <i class="zmdi zmdi-youtube"></i>youtube
                            </a>
+
                        </a>
                        </li>  
+
                    </li>
                        <li class="waves-effect waves-light">
+
                    <li class="waves-effect waves-light">
                            <a href="https://www.linkedin.com/company/igem-ionis" target="_blank">
+
                        <a href="https://www.linkedin.com/company/igem-ionis" target="_blank">
                                <i class="zmdi zmdi-linkedin"></i>LinkedIn
+
                            <i class="zmdi zmdi-linkedin"></i>LinkedIn
                            </a>
+
                        </a>
                        </li>  
+
                    </li>
+
 
                    </ul>
+
                </ul>
                </div>
+
 
             </div>
 
             </div>
 
         </div>
 
         </div>
        <!-- ====END FOOTER TOP==== -->
+
    </div>
       
+
    <!-- ====END FOOTER TOP==== -->
        <!-- ====START FOOTER AREA==== -->
+
 
        <footer class="footer_area">
+
    <!-- ====START FOOTER AREA==== -->
            <div class="footer_middle">
+
    <footer class="footer_area">
                <div class="container">
+
        <div class="footer_middle">
                    <div class="row">
+
            <div class="container">
                        <div class="col-xs-12">
+
                <div class="row">
                            <div class="scroll_area">
+
                    <div class="col-xs-12">
                                <div class="sroll_top">
+
                        <div class="scroll_area">
                                  <a href="#ancre"> <i class="zmdi zmdi-chevron-up btn waves-effect"> </i> </a
+
                            <div class="sroll_top">
                                </div>
+
                                <a href="#ancre"> <i class="zmdi zmdi-chevron-up btn waves-effect"> </i> </a>
 
                             </div>
 
                             </div>
 
                         </div>
 
                         </div>
 
                     </div>
 
                     </div>
 +
                </div>
 +
                <div class="row">
 
                     <div class="row">
 
                     <div class="row">
                      <div class="row">
 
 
                         <div class="col-lg-5 col-md-5 col-sm-12">
 
                         <div class="col-lg-5 col-md-5 col-sm-12">
 
                             <div class="middle_content">
 
                             <div class="middle_content">
                                 <h4>IONIS IGEM</h4>
+
                                 <h4>iGEM IONIS</h4>
                                 <p> We're a group of six different schools from the IONIS Education Group. For this competition we wanted to take advantages of the multiple schools and activity field given by the IONIS education group to create a solid project.</p>
+
                                 <p> We're a group of six different schools from the IONIS Education Group. For this
                              <a href="https://2016.igem.org/Team:Ionis_Paris/Team">Read More</a>
+
                                    competition we wanted to take advantages of the multiple schools and activity field
 +
                                    given by the IONIS education group to create a solid project.</p>
 +
                                <a href="https://2016.igem.org/Team:Ionis_Paris/Team">Read More</a>
 
                             </div>
 
                             </div>
 
                         </div>
 
                         </div>
             
+
 
 
                         <div class="col-lg-3 col-lg-offset-1 col-md-4 col-sm-7">
 
                         <div class="col-lg-3 col-lg-offset-1 col-md-4 col-sm-7">
 
                             <div class="footer_Widgets">
 
                             <div class="footer_Widgets">
Line 229: Line 231:
 
                                             <a href="mailto:igem.ionis@gmail.com">email: igem.ionis@gmail.com</a>
 
                                             <a href="mailto:igem.ionis@gmail.com">email: igem.ionis@gmail.com</a>
 
                                         </li>
 
                                         </li>
                                     
+
 
 
                                     </ul>
 
                                     </ul>
 
                                 </div>
 
                                 </div>
Line 235: Line 237:
 
                         </div>
 
                         </div>
  
                       
 
  
 
                     </div>
 
                     </div>
Line 247: Line 248:
 
                             <div class="col-md-7 fix_p_l">
 
                             <div class="col-md-7 fix_p_l">
 
                                 <nav>
 
                                 <nav>
                                     <ul class="ft_bottom">    
+
                                     <ul class="ft_bottom">
 
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris">Home</a></li>
 
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris">Home</a></li>
                                         <li><a href="https://2016.igem.org/At_the_lab.html">At the Lab</a></li>
+
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/Working_at_La_Paillasse">in the Lab</a></li>
                                         <li><a href="https://2016.igem.org/CelloCad"> Side Projects</a></li>
+
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/Measurement"> Side Projects</a></li>
                                         <li><a href="Results">Results</a></li>
+
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/Parts">Results</a></li>
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/Human_Practice">Human Practice</a></li>
+
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/HPintro">Human
                                         <li><a href="https://2016.igem.org/Team.html">Team</a></li>
+
                                            Practice</a></li>
 +
                                         <li><a href="https://2016.igem.org/Team:Ionis_Paris/Team">Team</a></li>
 
                                     </ul>
 
                                     </ul>
 
                                 </nav>
 
                                 </nav>
Line 259: Line 261:
 
                             <div class="col-md-5 fix_p">
 
                             <div class="col-md-5 fix_p">
 
                                 <div class="ft_paragraph">
 
                                 <div class="ft_paragraph">
                                     <p>©IONIS_IGEM_2016</a>.</p>  
+
                                     <p>©IONIS_IGEM_2016</a>.</p>
 
                                 </div>
 
                                 </div>
                             </div>
+
                             </div>
 
                         </div>
 
                         </div>
 
                     </div>
 
                     </div>
 
                 </div>
 
                 </div>
             </div>            
+
             </div>
        </footer>
+
    </footer>
        <!-- ====END FOOTER AREA==== -->
+
    <!-- ====END FOOTER AREA==== -->
     
+
 
        <!-- Nos scripts -->
+
    <!-- ====Google Maps API==== -->
<!-- TODO: Debug these scripts
+
    <script src="https://maps.googleapis.com/maps/api/js"></script>
        <script type="text/javascript" src="https://2016.igem.org/wiki/index.php?title=Template:IONIS_PARIS_JS_Venobox&action=raw&ctype=text/javascript"></script>
+
 
        <script type="text/javascript" src="https://2016.igem.org/wiki/index.php?title=Template:IONIS_PARIS_JS_MDB&action=raw&ctype=text/javascript"></script>
+
    <!-- Nos scripts -->
        <script type="text/javascript" src="https://2016.igem.org/wiki/index.php?title=Template:IONIS_PARIS_JS_Carousel&action=raw&ctype=text/javascript"></script>
+
    <script type="text/javascript" src="https://2016.igem.org/wiki/index.php?title=Template:IONIS_PARIS_JS&action=raw&ctype=text/javascript"></script>
        <script type="text/javascript" src="https://2016.igem.org/wiki/index.php?title=Template:IONIS_PARIS_JS&action=raw&ctype=text/javascript"></script>
+
-->
+
     
+
  
     
 
 
</html>
 
</html>

Revision as of 10:39, 18 October 2016

The Gaussia Luciferase

A bit of chemistry

The Gaussia luciferase (GLuc) was identified from the marine copepod Gaussia princeps. Discovered relatively recently, this luciferase has been attracting attention as a potential reporter protein [1] and as a useful tool for bio-imaging applications. However, its biophysical properties have yet to be fully characterized.[2]

This luciferase is coelenterazine-dependent. It catalyzes the oxidation of its substrate, coelenterazine, into coelenteramide to emit blue light with a peak emission at 488 nm. This reaction does not require ATP or other co-factors for activity and follows a simple equation[2][3].

GLuc shows the strongest bioluminescence intensity (over 200 fold more than the firefly Photinus pyralis and the Renilla reniformis luciferase bioluminescence activity). Moreover, this luciferase shows narrow substrate specificity and is highly specific for coelenterazine. [4] Among all other luciferases, GLuc has the highest ability to catalyze the oxidation of coelenterazine for the luminescence reaction and this catalytic activity was found to be highly stable under a wide range of temperatures and in an acidic environment. However, its activity is salt dependent (with the highest activity at 50mM NaCl), strongly inhibited by heavy metal ions (Cu2+) and stimulated by monovalent ions (Cl−, I−, Br−).[2][4]


GLuc

Protein structure

GLuc's sequence was first reported in 1999 by isolated the cDNA from G. princeps and cloning it in E.coli cells. This protein is composed of 185 amino acid residues including a putative signal peptide sequence for secretion. [5] With a molecular mass of 19.9 kDa and a short coding sequence (555 bp), it is the smallest known luciferase.

This protein is composed of two domains (Domain 1: residues 27–97; Domain 2: 98–168) linked together and preceded by a pre-sequence (residues 1 – 26). GLuc is predicted to be a helical protein, and sequence alignment predicts that each domain contains two intra-domain disulfide bonds and an inter-domain disulfide bond between cysteines C59 and C120.

The highly conserved regions comprised of residues 52–77 in Domain 1 and 123–148 in Domain 2 seems to overlap with the active site. [2][4] Gaussia luciferase possesses a natural secretory signal (residues 1-16) composed of an N-terminal basic residue linked to a stretch of amino acids containing a hydrophobic core. [5] Upon expression, the luciferase is secreted into the cell medium. Therefore, lysing cells in order to assay GLuc activity is not necessary. [2]