Difference between revisions of "Team:Paris Saclay/Notebook/October/19"

(Wednesday 19th October)
(Cytometry measurements=)
Line 5: Line 5:
 
===Visualization===
 
===Visualization===
  
===Cytometry measurements====
+
===Cytometry measurements===
 
''By Sylvie''
 
''By Sylvie''
  
Line 18: Line 18:
 
This preparation was divided in 4 tubes of 4ml and a falcon of 32 ml.
 
This preparation was divided in 4 tubes of 4ml and a falcon of 32 ml.
  
In 1 pool of 4 tubes we added rapalog in order to test the fluorescence :
+
In the 4 tubes we added rapalog in order to test the fluorescence :
tube1 : control without rapalog
+
*tube 1: control without rapalog
tube : 5 nM of rapalog
+
*tube 2: 5 nM of rapalog
tube : 50 nM of rapalog
+
*tube 3: 50 nM of rapalog
tube4 : 500 nM of rrapalog
+
*tube 4: 500 nM of rrapalog
  
 
After 5 hours of culture, cytometry didn't show any fluorescence.
 
After 5 hours of culture, cytometry didn't show any fluorescence.
Line 29: Line 29:
 
For the falcon of the remaining preparation (32ml) :
 
For the falcon of the remaining preparation (32ml) :
 
*Centrifuge
 
*Centrifuge
* Discard the supernatant
+
*Discard the supernatant
 
*Resuspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
 
*Resuspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
 
*Discardthe supernatant
 
*Discardthe supernatant
 
*Resuspend in 800 μL of TNG buffer and 20μL of PMSI
 
*Resuspend in 800 μL of TNG buffer and 20μL of PMSI
 
*Divide the preparation in 8 eppendorf (100μL)
 
*Divide the preparation in 8 eppendorf (100μL)
*For one eppendorf : add « cap of glass bead, acid washed) 150-212μm sigma »
+
*For one eppendorf : add glass bead, acid washed(150-212μm)
 
*30 min on vortex
 
*30 min on vortex
 
*Add 100μL of buffer in each tube
 
*Add 100μL of buffer in each tube
Line 42: Line 42:
  
  
Read on a board (plaque) with a 488 nm excitation.
+
Read on a plate at 488 nm excitation.
  
 
{{Team:Paris_Saclay/notebook_footer}}
 
{{Team:Paris_Saclay/notebook_footer}}

Revision as of 22:48, 19 October 2016

Wednesday 19th October

Visualization

Cytometry measurements

By Sylvie

No clone was observed on the control plate from 18/10 Clones have grown on the other plates.

Transformations were done from the Petri dish containing the preparation diluted 10 times with :

50 mL LB (CM 15μg/L+Amp 50μg/L) 500μL of cell preparation at DO=2,2

This preparation was divided in 4 tubes of 4ml and a falcon of 32 ml.

In the 4 tubes we added rapalog in order to test the fluorescence :

  • tube 1: control without rapalog
  • tube 2: 5 nM of rapalog
  • tube 3: 50 nM of rapalog
  • tube 4: 500 nM of rrapalog

After 5 hours of culture, cytometry didn't show any fluorescence.


For the falcon of the remaining preparation (32ml) :

  • Centrifuge
  • Discard the supernatant
  • Resuspend the pellet in 15 ml of 100mM Tris (pH= 7,4), 100mM NaCl, 10 % glycerol
  • Discardthe supernatant
  • Resuspend in 800 μL of TNG buffer and 20μL of PMSI
  • Divide the preparation in 8 eppendorf (100μL)
  • For one eppendorf : add glass bead, acid washed(150-212μm)
  • 30 min on vortex
  • Add 100μL of buffer in each tube
  • centrifuge
  • Add Rapalog at 150nM in each tube except for one control
  • Incubate 30 min


Read on a plate at 488 nm excitation.