Difference between revisions of "Team:SCAU-China/Demonstrate"

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      <div class="text">Fig.1 Not I digestion of constructs cotaining different numbers of genes.
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Not I is the acceptor vector (pYLTAC380GW plasmid) and lanes 3-6 are intermediate products created during the construction of our delivering vecter,pYLTAC380MF-BBPC. Bands with arrows are the trangenes release from vector backbone and length of corresponding genes are indicated at the paretheses.
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      <div class="text">Fig.n HPLC analysis diagram of standard samples of astaxanthin(a);
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HPLC analysis diagram of  samples extract  from trangenes rice HG-380MF-BBPC (b);HPLC analysis diagram of  samples extract  from  HG-WT rice (c);<br><br>
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Compared with the standard samples with HPLC analysis diagram, you can see the sample extract  from rice and standard samples  have the same peak at the same time, show that the  transgenic rice seed which carry the four genes  expressed astaxanthin. Results indicate  that we are successful synthesize astaxanthin by rice endosperm synthetic .</div> 
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      <div class="text">Fig.Relative transcript levels of isoprenoid and carotenoid biosynthetic genes in rice at filling stage.qPCR analysis of the expression of CrtI,BKT,BHY,PSY, PDS, ZDS, ISO,BLCY,ELCY,HYD and rPSY in the rice of HG-WT, its transformants HG-BBPC-8-6-1,HG-BBPC-8-6-2,HG-BBPC-13-5-2,HG-BBPC-13-5-3,HG-BBPC-13-9-1and HG-BBPC-13-9-6 .</div>
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<div class="h1_font_size">Demonstrate</div>
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<div class="h2_font_size">Phenotype of aSTARice</div>
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<div class="p_font_size">β-carotene is the major compound of Golden Rice. When we endosperm-specifically co-expressed PSY and CrtI genes, the expected phenotype of Golden Rice was obtained (Figure 5). Although re-transformation of Golden Rice using BHY and BKT would get aSTARice (astaxanthin rice), it is time-consuming and labor-intensive. Therefore, the application of transgene stacking the four genes (PSY, CrtI, BHY and BKT) is more effective and easier to directly biosynthesize astaxanthin.</div>
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<div class="p_font_size">Astaxanthin is an orange-red carotenoid. When we directly stacked the four genes in rice and specially expressed in endosperm, the transgenic polished seeds showed pigmentation of orange-red astaxanthin (Figure 5). Wild-type rice remains colorless without astaxanthin accumulation.</div>
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<div class="row" style="margin-top:20px">
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<div class="col s12" align="center">
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<img alt="image" class="img-responsive col s11" src="https://static.igem.org/mediawiki/2016/4/4f/T--SCAU-China--Demonstrate1.jpg">
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<div class="p_font_size" style="margin-bottom:20px"><small>Figure 5 The polished rice phenotype of aSTARice. The yellow arrow indicates production of Golden Rice by stacking PSY and CrtI gene (380MF-PC). The black dot arrow indicates the re-transformation method using BHY and BKT genes. The red arrow indicates direct astaxanthin biosynthesis in rice endosperm by stacking PSY, CrtI, BHY and BKT genes (380MF-BBPC).</small></div>
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<div class="h2_font_size">HPLC analysis on aSTARice</div>
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<div class="p_font_size">To confirm the synthetic astaxanthin in aSTARice seeds, we used high performance liquid chromatography (HPLC) to analyze the pigment composition and astaxanthin content from the methanol extracts of aSTARice and wild-type rice HG1 seeds. Astaxanthin is identified on the basis of retention times related to standard sample. Content is determined by integrating peak areas and converted to concentration. According to the retention time of the standard astaxanthin sample, astaxanthin compound of extracts from aSTARice seeds can be confirmed (Figure 6). The HPLC results also showed that astaxanthin was the predominant carotenoid in aSTARice, and did not exist in wild-type rice seeds. The orange–red compound in transgenic seeds mainly is astaxanthin.</div>
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<div class="row" style="margin-top:20px">
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<div class="col s12" align="center">
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<img alt="image" class="img-responsive col s11" src="https://static.igem.org/mediawiki/2016/7/79/T--SCAU-China--Demonstrate2.jpg">
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<div class="p_font_size" style="margin-bottom:20px"><small>Figure 6 HPLC chromatogram of methanol extracts from transgenic aSTARice (red line) and wild-type (blue line) rice seeds. HPLC analysis recorded at 480 nm of extracts.</small></div>
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<div class="p_font_size">To calculate astaxanthin content of different transgenic aSTARice lines, we analyzed the relationship between different concentration of the astaxanthin stand sample and its peak areas using HPLC, and we acquired an astaxanthin standard sample curve (Figure 7). By using this curve, we analyzed several transgenic aSTARice seeds. Some lines accumulated astaxanthin up to 5.20 μg/g DW (dry seeds). In contrast, no astaxanthin was detected in wild-type rice.</div>
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<div class="p_font_size" style="margin-bottom:20px"><small>Figure 7 Standard curve of relationship between astaxanthin concentrations and its peak areas.</small></div>
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<div class="h2_font_size">Investigation on aSTARice T2 generation</div>
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<div class="col s12" align="center">
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<img alt="image" class="img-responsive col s11" src="https://static.igem.org/mediawiki/2016/6/66/T--SCAU-China--Demonstrate4.jpg">
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<div class="p_font_size" style="margin-bottom:20px"><small>Figure 8 Relative expression levels of four foreign astaxanthin biosynthetic genes and astaxanthin content in seeds of wild-type and aSTARice T2 generation. Their expression levels are normalized to Osactin1 transcript level. All reactions were carried out in triplicate, and each experiment was repeated twice. Error bars indicate ± SEM. DW, dry weight.</small></div>
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<div class="p_font_size">The aSTARice T2 generation seeds were harvested at the end of September this year and we performed quantitative RT-PCR (qRT-PCR) and HPLC analyzes. Several transgenic lines were chosen for investigation. As the results shown in the diagram, astaxanthin content varies from lines, some lines remain stable astaxanthin production while some synthesize in a low level. Supported by the qRT-PCR analysis, the low content of astaxanthin in the endosperm of transgenic lines are associated with poor transcriptional activity of a BHY gene, which no obvious transcriptional activity is detected in four lines. The investigation demonstrates that astaxanthin biosynthesis accomplishes only under the well cooperation of the four genes. When one of the four foreign genes was down regulation of expression, astaxanthin content would be decreased. These four genes are the essential genes for biosynthetic astaxanthin in aSTARice.</div>
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<div class="h2_font_size">Marker free</div>
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<div class="p_font_size">The multigene vector 380MF-BBPC has four genes (CrtI, PSY, BKT and BHY) for endosperm-specific synthetic astaxanthin, and a marker-free element comprised of two genes (HPT and Cre) for marker-free deletion. This marker-free element was placed between two loxP sites, and consists of a HPT (hygromycin) resistance gene expression cassette and a Cre gene expression cassette controlled by anther-specific promoter (Figure 9). When Cre gene was expressed in transgenic rice anther, the Cre enzyme deleted the HPT and Cre gene cassettes between two loxP sites. Two primer pairs, F1/R1 and F1/R2, were used to PCR identify the marker-free aSTARice T2 generations. As is shown in Figure 9a, the expected 400-bp band of F1/R2 PCR indicates marker-free homozygous lines, but the PCR results containing both 540-bp and 400-bp bands indicate marker-free heterozygous lines (Figure 9a). The 400-bp band was further determined by direct sequencing (Figure 9c). And more marker-free homozygous lines would be obtained in T3 generations.</div>
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<img alt="image" class="img-responsive col s11" src="https://static.igem.org/mediawiki/2016/3/3a/T--SCAU-China--Demonstrate5.jpg">
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<div class="p_font_size" style="margin-bottom:20px"><small>Figure 9 Marker-free analyses in aSTARice T2 generations. (a) Gel electrophoresis assays of marker-free specific 400-bp band. M, Marker 2K plus; WT, negative control (wild-type rice HG1); Lane marked as 1-6 are the T2 generation of aSTARice #8-6. (b) Schematic diagram of marker deletion process. (c). 400-bp PCR sequencing result.</small></div>
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<div class="p_font_size">In conclusion, we achieved astaxanthin accumulation in rice endosperm, indicated that rice endosperm bioreactor is an efficient tool for astaxanthin production. Our project demonstrated that rice endosperm is a potential green factories for the economical production of astaxanthin.</div>
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Revision as of 08:06, 14 October 2016

SCAU

Demonstrate
Phenotype of aSTARice
β-carotene is the major compound of Golden Rice. When we endosperm-specifically co-expressed PSY and CrtI genes, the expected phenotype of Golden Rice was obtained (Figure 5). Although re-transformation of Golden Rice using BHY and BKT would get aSTARice (astaxanthin rice), it is time-consuming and labor-intensive. Therefore, the application of transgene stacking the four genes (PSY, CrtI, BHY and BKT) is more effective and easier to directly biosynthesize astaxanthin.
Astaxanthin is an orange-red carotenoid. When we directly stacked the four genes in rice and specially expressed in endosperm, the transgenic polished seeds showed pigmentation of orange-red astaxanthin (Figure 5). Wild-type rice remains colorless without astaxanthin accumulation.
image
Figure 5 The polished rice phenotype of aSTARice. The yellow arrow indicates production of Golden Rice by stacking PSY and CrtI gene (380MF-PC). The black dot arrow indicates the re-transformation method using BHY and BKT genes. The red arrow indicates direct astaxanthin biosynthesis in rice endosperm by stacking PSY, CrtI, BHY and BKT genes (380MF-BBPC).
HPLC analysis on aSTARice
To confirm the synthetic astaxanthin in aSTARice seeds, we used high performance liquid chromatography (HPLC) to analyze the pigment composition and astaxanthin content from the methanol extracts of aSTARice and wild-type rice HG1 seeds. Astaxanthin is identified on the basis of retention times related to standard sample. Content is determined by integrating peak areas and converted to concentration. According to the retention time of the standard astaxanthin sample, astaxanthin compound of extracts from aSTARice seeds can be confirmed (Figure 6). The HPLC results also showed that astaxanthin was the predominant carotenoid in aSTARice, and did not exist in wild-type rice seeds. The orange–red compound in transgenic seeds mainly is astaxanthin.
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Figure 6 HPLC chromatogram of methanol extracts from transgenic aSTARice (red line) and wild-type (blue line) rice seeds. HPLC analysis recorded at 480 nm of extracts.
To calculate astaxanthin content of different transgenic aSTARice lines, we analyzed the relationship between different concentration of the astaxanthin stand sample and its peak areas using HPLC, and we acquired an astaxanthin standard sample curve (Figure 7). By using this curve, we analyzed several transgenic aSTARice seeds. Some lines accumulated astaxanthin up to 5.20 μg/g DW (dry seeds). In contrast, no astaxanthin was detected in wild-type rice.
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Figure 7 Standard curve of relationship between astaxanthin concentrations and its peak areas.
Investigation on aSTARice T2 generation
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Figure 8 Relative expression levels of four foreign astaxanthin biosynthetic genes and astaxanthin content in seeds of wild-type and aSTARice T2 generation. Their expression levels are normalized to Osactin1 transcript level. All reactions were carried out in triplicate, and each experiment was repeated twice. Error bars indicate ± SEM. DW, dry weight.
The aSTARice T2 generation seeds were harvested at the end of September this year and we performed quantitative RT-PCR (qRT-PCR) and HPLC analyzes. Several transgenic lines were chosen for investigation. As the results shown in the diagram, astaxanthin content varies from lines, some lines remain stable astaxanthin production while some synthesize in a low level. Supported by the qRT-PCR analysis, the low content of astaxanthin in the endosperm of transgenic lines are associated with poor transcriptional activity of a BHY gene, which no obvious transcriptional activity is detected in four lines. The investigation demonstrates that astaxanthin biosynthesis accomplishes only under the well cooperation of the four genes. When one of the four foreign genes was down regulation of expression, astaxanthin content would be decreased. These four genes are the essential genes for biosynthetic astaxanthin in aSTARice.
Marker free
The multigene vector 380MF-BBPC has four genes (CrtI, PSY, BKT and BHY) for endosperm-specific synthetic astaxanthin, and a marker-free element comprised of two genes (HPT and Cre) for marker-free deletion. This marker-free element was placed between two loxP sites, and consists of a HPT (hygromycin) resistance gene expression cassette and a Cre gene expression cassette controlled by anther-specific promoter (Figure 9). When Cre gene was expressed in transgenic rice anther, the Cre enzyme deleted the HPT and Cre gene cassettes between two loxP sites. Two primer pairs, F1/R1 and F1/R2, were used to PCR identify the marker-free aSTARice T2 generations. As is shown in Figure 9a, the expected 400-bp band of F1/R2 PCR indicates marker-free homozygous lines, but the PCR results containing both 540-bp and 400-bp bands indicate marker-free heterozygous lines (Figure 9a). The 400-bp band was further determined by direct sequencing (Figure 9c). And more marker-free homozygous lines would be obtained in T3 generations.
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Figure 9 Marker-free analyses in aSTARice T2 generations. (a) Gel electrophoresis assays of marker-free specific 400-bp band. M, Marker 2K plus; WT, negative control (wild-type rice HG1); Lane marked as 1-6 are the T2 generation of aSTARice #8-6. (b) Schematic diagram of marker deletion process. (c). 400-bp PCR sequencing result.
In conclusion, we achieved astaxanthin accumulation in rice endosperm, indicated that rice endosperm bioreactor is an efficient tool for astaxanthin production. Our project demonstrated that rice endosperm is a potential green factories for the economical production of astaxanthin.