Difference between revisions of "Team:BNU-China/Proof"

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             <h2>2. The expression of fusion protein</h2>
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             <h2>3. 体外提取微管蛋白结果</h2>
  
 
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Revision as of 19:38, 14 October 2016

Team:BNU-CHINA - 2016.igem.org

RESULTS

1. The expression of α-tubulin、β-tubulin、n-luciferase、c-luciferase

1.1 vector construction

Fig.1.1.1 electrophoresis result of α-tubulin, β-tubulin, n-luciferase, c-luciferase gene fragments

We got gene fragments of α-tubulin、β-tubulin、n-luciferase、c-luciferase via PCR and verified them by electrophoresis(fig.) The theoretic gene size of α-tubulin is 1356bp, β-tubulin is 1335bp, n-luciferase is 1248bp, c-luciferase is 459bp, which fit our experimental results.

We ligated our gene fragments to E.coli expression plasmid pET30a(+) and the sequencing result showed that we successfully constructed the α-tubulin, β-tubulin, n-luciferase, c-luciferase expression vectors.

Fig.1.1.2 electrophoresis result of α-tubulin、β-tubulin、n-luciferase、c-luciferase expression vectors
(A. electrophoresis result of colony PCR. The arrows show the correct size of target fragments使用α-tubulin、β-tubulin、n-luciferase、c-luciferase的引物对导入构建好的表达载体的质粒扩增性大肠杆菌菌株Tran5α进行菌落PCR,箭头指出的是大小正确的条带; B.重新构建β-tubulin的载体,导入Tran5α后挑取单菌落提取质粒,并使用β-tubulin的引物对提取的质粒进行PCR验证,箭头指出的是大小正确的条带。)

We transformed the expression vectors to E.coli expression strain TranB(DE3). After culturing and inducing with IPTG, we lysed the bacteria and used SDS-PAGE/ western-blot to test the protein from the bacteria supernatant, pellet and the renatured inclusion body.

Fig.1.1.3 SDS-PAGE result of β-tubulin
(left to right: non-induced group, control, induced group. arrow shows the correct molecular weight of target protein)

Apart from this, we also transformed plasmids to Rosetta(DE3) which can express rare codons and improve the expression level of eukaryotic protein.

Based on the results, α-tubulin and β-tubulin were successfully expressed in cell.

We collaborated with Fujian Agriculture and Forest University and asked them to test the interaction between α and β-tubulin. Thus verified the activity of tubulin monomers.

这里放发福的结果

2. The expression of fusion protein

2.1 PCR fusion PCR

We constructed α-tubulin-YNE、YNE-α-tubulin、α-tubulin-YCE、YCE-α-tubulin、β-tubulin-YNE、YNE-β-tubulin、β-tubulin-YCE、YCE-β-tubulin、α-tubulin-nluc、nluc-α-tubulin、α-tubulin-cluc、cluc-α-tubulin respectively via fusion PCR. After ligating these fusion gene fragments to TransB(DE3), we transformed target plasmids to Trans5α. When colony PCR was done, we picked correct colony for plasmid amplification.

figure 2.1.1 Result of colony PCR
(arrows show the correct size of fusion gene fragments:α-tubulin-YNE is 1866 bp、α-tubulin-YCE is 1650bp、β-tubulin-YCE is 1629bp、α-tubulin-nluc is 2640bp、α-tubulin-cluc is1857bp)

我们将PCR验证结果正确的载体送去华大公司测序,测序结果表明我们成功构建出α-tubulin-YNE、YNE-α-tubulin、α-tubulin-YCE、YCE-α-tubulin、β-tubulin-YCE、YCE-β-tubulin、α-tubulin-nluc、cluc-α-tubulin表达载体。

We transformed the expression plasmids to E.coli expression strain TranB(DE3). The protein expression predicted website http://www.biotech.ou.edu/ showed that our fusion protein would probably expressed as inclusion bodies. We therefore renatured the inclusion bodies and verified through SDS-PAGE.

figure 2.1.2 SDS-PAGE of renatured bodies from α-tubulin-YNE、YNE-α-tubulin
(the molecular weight of target fusion protein is 74.6.arrows show the correct size)

2.2 Gateway

Apart from these, we also expressed our target protein through Rosetta(DE3).

In our experiment, we also try to construct fusion protein vectors with Gateway Large-scale Cloning technology. We used Invitrogen pENTR/D TOPO to clone β-tubulin into entry vector. Designing primer based on β-tubulin sequence and running PCR procedure. From this picture, the band of β-tubulin was correct.

figure 2.2.1 PCR result of entry vector

In order to do LR reaction, we used the restriction endonuclease Not I to digest the entry vector. The bands of linear vector and the origin vector suggested that the digestion was efficiency.

figure 2.2.2 single digestion result of entry vector

Using Invitrogen Gateway LR Clonase II Enzyme Mix, the entry vector can be ligate with pCambia1300-nluc and pCambia1300-cluc respectively. So the destination vectors were complete. After transformation, running PCR with β-tubulin’s primers, the bands show high positive rates as showed in figure 2.2.3.

figure 2.2.3 PCR result of target gene

Extracting plasmid, the product gal bands show that cluc-β-tubulin is correct. Running PCR using the reverse primer of β-tubulin and the forward primer of cluc, the correct band existed.

figure 2.2.4 PCR result of pcambia nluc, pcambia cluc
(arrow shows the correct size of gene fragment)

3. 体外提取微管蛋白结果