Difference between revisions of "Team:Wageningen UR/Parts"

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<h4><a href="#header">BioBricks</a></h4>
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<html>
  
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<h1><b>BioBricks overview</b></h1>
  
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<p>Below, you can find all the BioBricks we created!</p>
  
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<table>
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  <tr>
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<div class="column half_size">
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    <th>BioBrick number</th>
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<div class="highlight">
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    <th>BioBrick name</th>     
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<h5>Note</h5>
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    <th>Designer</th>
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
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  </tr>
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</div>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913025">BBa_K1913025</a></td>
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    <td><b>Best basic part:</b> Wild type plac-FixK2 hybrid promoter</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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<div class="column half_size">
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    <td><a href="http://parts.igem.org/Part:BBa_K1913011">BBa_K1913011</a></td>
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    <td><b>Best composite part:</b> Vitamin B12 riboswitch + mRFP</td>
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<h5>Adding parts to the registry</h5>
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    <td>Carina</td>
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
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  </tr>
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
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  <tr>
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</div>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913008">BBa_K1913008</a></td>
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    <td>Vitamin B12 riboswitch</td>
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    <td>Carina</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913009">BBa_K1913009</a></td>
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<div class="column half_size">
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    <td>Guanine riboswitch</td>
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    <td>Carina</td>
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<h5>What information do I need to start putting my parts on the Registry?</h5>
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  </tr>
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<p>The information needed to initially create a part on the Registry is:</p>
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  <tr>
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<ul>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913010">BBa_K1913010</a></td>
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<li>Part Name</li>
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    <td>tetR QPI + mRFP</td>
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<li>Part type</li>
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    <td>Carina</td>
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<li>Creator</li>
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  </tr>
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<li>Sequence</li>
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  <tr>
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<li>Short Description (60 characters on what the DNA does)</li>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913012">BBa_K1913012</a></td>
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<li>Long Description (Longer description of what the DNA does)</li>
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    <td>Guanine riboswitch + mRFP</td>
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<li>Design considerations</li>
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    <td>Carina</td>
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</ul>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913005">BBa_K1913005</a></td>
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    <td>lux quorum sensing system + GFP reporter</td>
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    <td>Thomas</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913006">BBa_K1913006</a></td>
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    <td>434- and lambda cI balance operon + mRFP reporter</td>
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    <td>Thomas</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913007">BBa_K1913007</a></td>
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    <td>434- and lambda cI operon for tuning protein balance</td>
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    <td>Thomas</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913014">BBa_K1913014</a></td>
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    <td>3-oxo-hexanoyl-HSL GFP reporter</td>
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    <td>Thomas</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913016">BBa_K1913016</a></td>
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    <td>434- and lambda cI balance RFP reporter</td>
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    <td>Thomas</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913000">BBa_K1913000</a></td>
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    <td>chiA for <i>Varroa destructor</i></td>
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    <td>Lisa</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913001">BBa_K1913001</a></td>
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    <td>chiB for <i>Varroa destructor</i></td>
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    <td>Lisa</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913002">BBa_K1913002</a></td>
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    <td>chiA device regulated by pBAD</td>
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    <td>Lisa</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913003">BBa_K1913003</a></td>
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    <td>chiB device regulated by pBAD</td>
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    <td>Lisa</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913019">BBa_K1913019</a></td>
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    <td>Guanine riboswitch BS-yxjA</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913020">BBa_K1913020</a></td>
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    <td>mRFP with degradation tag</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913021">BBa_K1913021</a></td>
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    <td>sfGFP with degradation tag</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913022">BBa_K1913022</a></td>
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    <td>Synthetic plac-FixK2 hybrid promoter with RBS</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913023">BBa_K1913023</a></td>
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    <td>Synthetic plac-FixK2 hybrid promoter with RBS</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913024">BBa_K1913024</a></td>
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    <td>Synthetic ptet-FixK2 hybrid promoter with RBS</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913026">BBa_K1913026</a></td>
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    <td>Wild type ptet-FixK2 hybrid promoter</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913027">BBa_K1913027</a></td>
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    <td>Wild type plac-FixK2 hybrid promoter with mRFP</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913028">BBa_K1913028</a></td>
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    <td>Wild type ptet-FixK2 hybrid promoter with mRFP</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913029">BBa_K1913029</a></td>
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    <td>Synthetic plac-FixK2 hybrid promoter +RBS with mRFP</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913030">BBa_K1913030</a></td>
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    <td>Synthetic plac-FixK2 hybrid promoter+RBS with mRFP</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913031">BBa_K1913031</a></td>
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    <td>Synthetic ptet-FixK2 hybrid promoter+RBS with mRFP</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913032">BBa_K1913032</a></td>
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    <td>Toggle Switch device</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913033">BBa_K1913033</a></td>
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    <td>Toggle Switch device</td>
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    <td>Tianhe</td>
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  </tr>
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  <tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913034">BBa_K1913034</a></td>
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    <td>Blue light sensor generator</td>
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    <td>Tianhe</td>
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  </tr>
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</table>
  
 
<p>
 
<p>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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Besides, we submitted one part that cannot be classified as a BioBrick because it has some illegal restriction sites and it is in the pSB1A3 backbone. Read <a href="https://2016.igem.org/Team:Wageningen_UR/Notebook/InVitroAssay#appendices">here</a> why.</p>
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<h5>Inspiration</h5>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<ul>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<h5>Part Table </h5>
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<groupparts>iGEM2016 Example</groupparts>
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    <th>BioBrick number</th>
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    <th>BioBrick name</th>     
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    <th>Designer</th>
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  </tr>
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<tr>
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    <td><a href="http://parts.igem.org/Part:BBa_K1913015">BBa_K1913015</a></td>
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    <td>Cry3Aa with araC/pBAD</td>
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    <td>Jaccoline/Linea</td>
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  </tr>
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</table>
  
  
 
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{{Wageningen_UR/footer}}

Latest revision as of 23:47, 19 October 2016

MENU ▤
Wageningen UR iGEM 2016

 

 

 

BioBricks overview

Below, you can find all the BioBricks we created!

BioBrick number BioBrick name Designer
BBa_K1913025 Best basic part: Wild type plac-FixK2 hybrid promoter Tianhe
BBa_K1913011 Best composite part: Vitamin B12 riboswitch + mRFP Carina
BBa_K1913008 Vitamin B12 riboswitch Carina
BBa_K1913009 Guanine riboswitch Carina
BBa_K1913010 tetR QPI + mRFP Carina
BBa_K1913012 Guanine riboswitch + mRFP Carina
BBa_K1913005 lux quorum sensing system + GFP reporter Thomas
BBa_K1913006 434- and lambda cI balance operon + mRFP reporter Thomas
BBa_K1913007 434- and lambda cI operon for tuning protein balance Thomas
BBa_K1913014 3-oxo-hexanoyl-HSL GFP reporter Thomas
BBa_K1913016 434- and lambda cI balance RFP reporter Thomas
BBa_K1913000 chiA for Varroa destructor Lisa
BBa_K1913001 chiB for Varroa destructor Lisa
BBa_K1913002 chiA device regulated by pBAD Lisa
BBa_K1913003 chiB device regulated by pBAD Lisa
BBa_K1913019 Guanine riboswitch BS-yxjA Tianhe
BBa_K1913020 mRFP with degradation tag Tianhe
BBa_K1913021 sfGFP with degradation tag Tianhe
BBa_K1913022 Synthetic plac-FixK2 hybrid promoter with RBS Tianhe
BBa_K1913023 Synthetic plac-FixK2 hybrid promoter with RBS Tianhe
BBa_K1913024 Synthetic ptet-FixK2 hybrid promoter with RBS Tianhe
BBa_K1913026 Wild type ptet-FixK2 hybrid promoter Tianhe
BBa_K1913027 Wild type plac-FixK2 hybrid promoter with mRFP Tianhe
BBa_K1913028 Wild type ptet-FixK2 hybrid promoter with mRFP Tianhe
BBa_K1913029 Synthetic plac-FixK2 hybrid promoter +RBS with mRFP Tianhe
BBa_K1913030 Synthetic plac-FixK2 hybrid promoter+RBS with mRFP Tianhe
BBa_K1913031 Synthetic ptet-FixK2 hybrid promoter+RBS with mRFP Tianhe
BBa_K1913032 Toggle Switch device Tianhe
BBa_K1913033 Toggle Switch device Tianhe
BBa_K1913034 Blue light sensor generator Tianhe

Besides, we submitted one part that cannot be classified as a BioBrick because it has some illegal restriction sites and it is in the pSB1A3 backbone. Read here why.

BioBrick number BioBrick name Designer
BBa_K1913015 Cry3Aa with araC/pBAD Jaccoline/Linea