Difference between revisions of "Team:TAS Taipei/Attributions"

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<h3>★  ALERT! </h3>
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<p>This page is used by the judges to evaluate your team for the <a href="https://2016.igem.org/Judging/Medals">Attributions bronze criterion</a>. </p>
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<p> Delete this box in order to be evaluated for this medal. See more information at <a href="https://2016.igem.org/Judging/Pages_for_Awards/Instructions"> Instructions for Pages for awards</a>.</p>
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<a href="https://2016.igem.org/Team:TAS_Taipei/Background"><h4 class="dropdown-toggle disabled" data-toggle="dropdown"><b>PROJECT</b></h4></a>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Background">Background</a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Achievements">Achievements</a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Collaborations">Collaborations</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Parts">Parts</a></h5>
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<div style='height:140px;'>
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<img src="https://static.igem.org/mediawiki/2016/1/11/T--TAS_Taipei--TAS_Icon_Project.png">
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<h4><b>Cataracts</b> - the leading cause of blindness. Find out how we can non-invasively <b>treat</b> and <b>prevent</b> cataract formation.</b></h4>
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</li>
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<a href="https://2016.igem.org/Team:TAS_Taipei/Experimental_Summary"><h4 class='dropdown-toggle disabled' data-toggle="dropdown"><b>EXPERIMENTAL</b></h4></a>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Experimental_Summary#lensmodel">Lens Cataract Model</a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Experimental_Summary#construct">Prevention and Treatment Constructs </a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Experimental_Summary#prototype">Delivery Prototype</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Notebook">Notebook</a></h5>
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<div style='height:140px;'>
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<img src="https://static.igem.org/mediawiki/2016/b/b0/T--TAS_Taipei--TAS_Icon_Experiments.png">
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                        <h4>We build <b>constructs</b> to make our great ideas become reality. Follow along our discovery of exciting science!</h4>
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</li>
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<li class="dropdown">
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<a href="https://2016.igem.org/Team:TAS_Taipei/Model"><h4 class='dropdown-toggle disabled' data-toggle="dropdown"><b>MODEL</b></h4></a>
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<div class='subcategories_container'>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Model#GSRFunc">GSR Function</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Model#prototype">Prototype Delivery</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Model#treatment">CH25H Treatment</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Model#software">Calculator</a></h5>
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</div>
  
<p> Each team must clearly attribute work done by the student team members on this page. The team must distinguish work done by the students from work done by others, including the host labs, advisors, instructors, and individuals not on the team roster. </p>
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</div>
 
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<img src="https://static.igem.org/mediawiki/2016/c/ca/T--TAS_Taipei--TAS_Icon_Model.png">
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<h4><b>Computational Biology</b> provides us models that we cannot easily test experimentally. Click to find out the results of our modeling, and the math behind it!</h4>
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</div>
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<a href="https://2016.igem.org/Team:TAS_Taipei/Human_Practices"><h4 class='dropdown-toggle disabled' data-toggle="dropdown"><b>HUMAN PRACTICE</b></h4></a>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Human_Practices#research">Research</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Human_Practices#outreach">Outreach</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Human_Practices#impact">Impact</a></h5>
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</div>
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<div style='height:140px;'>
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<img src="https://static.igem.org/mediawiki/2016/b/b9/T--TAS_Taipei--TAS_Icon_HP.png">
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<h4>We don't just grow cool bacteria. We make a <b>difference</b>. Find out how we tackled <b>social aspects</b> of this project.</h4>
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</div>
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</li>
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<li class="dropdown">
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<a href="https://2016.igem.org/Team:TAS_Taipei/Safety"><h4 class='dropdown-toggle disabled' data-toggle="dropdown"><b>SAFETY</b></h4></a>
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<div class="dropdown-menu">
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<div style='height:100px;'>
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<div class='subcategories_container'>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Safety#overview">Overview</a></h5>
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</div>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Safety#biosafety">Biosafety</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Safety#riskreduction">Risk Reduction Methods</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Safety#furtherquestion">Further Questions</a></h5>
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</div>
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</div>
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<img src="https://static.igem.org/mediawiki/2016/7/7e/T--TAS_Taipei--TAS_Icon_Safety.png">
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<h4><b>Safety first.</b> Especially in a lab. Here's how we maintained and investigated the integrity and security of our work environment.</h4>
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</div>
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<a href="https://2016.igem.org/Team:TAS_Taipei/Team"><h4 class='dropdown-toggle disabled' data-toggle="dropdown"><b>TEAM</b></h4></a>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Team#members">Members</a></h5>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Team#about">About</a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Attributions">Attributions</a></h5>
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<div>
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<h5><a href="https://2016.igem.org/Team:TAS_Taipei/Wiki_Standard_Pages">Wiki Standard Pages</a></h5>
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</div>
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</div>
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<div style='height:140px;'>
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<img src="https://static.igem.org/mediawiki/2016/c/c6/T--TAS_Taipei--TAS_Icon_Team.png">
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<h4>Every iGEM project is the accumulation of an entire year's hard work by a group of cheerful students. <b>Meet the team!</b></h4>
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</div>
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</div>
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</li>
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<a href="https://2016.igem.org/Team:TAS_Taipei" style='text-decoration: none'><img src="https://static.igem.org/mediawiki/2016/c/c6/T--TAS_Taipei--TAS_iGEM_Logo.png
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<h2 style="font-family:'Lato';letter-spacing:10px;color: white; font-size: 60px;  margin-top: 0;  margin-bottom: 0;"><b>
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C&#9678;UNTERACTS</b></h2>
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</a>
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<a href="https://igem.org/HS"><img src="https://static.igem.org/mediawiki/2016/6/6e/T--TAS_Taipei--TAS_Icon_Logo2.png" alt="" style="width: 100px;"></a>
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<h1>Attributions</h1>
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                        <h2>Team Member Attributions</h2>
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                        <p>The members were asked to describe their individual contributions to create this team project. This included how they contributed to the research, experimentation, and presentation of our project, as well as how they contributed to make this year's journey an unforgettable one.</p>
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                        <p>Below are the responses. Unfortunately, not all members were able to respond, though we still thank everyone involved in our project for their contributions.</p>
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                                                    <th>Name</th>
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                                                    <th>Description</th>
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                                                </tr>
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                                                <tr>
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                                                    <td>Huiru H.</td>
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                                                    <td>I am the co-project head with Fiona, and I focused mainly on building BioBrick constructs, testing proof of concept, and making contact lens prototypes. I’m also in charge of eating most of the failed cupcakes and dancing with a helmet on in the lab because biosafety. </td>
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                                                    <td>Changsun L.</td>
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                                                    <td>I am one of the experiment heads and I worked on building Biobrick constructs, finalizing the chitosan nanoparticle procedures and devising protein release experiment. I also worked on miniprep purifying the proteins produced from our BioBrick constructs. I wanted to find a treatment for cataracts because it is the leading cause of blindness according to WH2O2. </td>
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                                                </tr>
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                                                <tr>
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                                                    <td>Fiona T.</td>
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                                                    <td>I had a ton of fun (and stress) building and documenting DNA parts, adding compounds into cataracts model, and purifying proteins that didn’t get eluted! </td>
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                                                    <td>Avery W.</td>
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                                                    <td>I was in charge of modeling and wiki. People who visited our poster should recognize me by the sign I held: “Ask me about my modeling! &#9786; For modeling, I researched, coded, analyzed, and typed all five mathematical models on prototype design, and built the nanoparticle calculator (software). For wiki, I coded the wiki HTML/CSS/JS pages, including the cataracts animation in the background that sadly no one noticed. I was also in charge of setting and enforcing deadlines for wiki pages, which as expected did not work out.<br>
  
  
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When my eyes started to hurt after staring at a laptop screen, I played a crucial role in experiments serving as a secondary eppendorf holder, during which I patiently listened to Changsun or Huiru’s complaints about their experiments (and usually making them even more frustrated). I also documented the entire Boston trip through my selfies (<a href="https://2016.igem.org/Team:TAS_Taipei/Team">see example</a>). </td>
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                                                <tr>
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                                                    <td>Dennis J.</td>
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                                                    <td>I am the safety head. I contributed other members in their experiments, research, and modeling. You have to remember, looks are deceiving, so do not forget to check your lab benches twice! </td>
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                                                <tr>
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                                                    <td>Austin L.</td>
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                                                    <td>I free-rided on all the hard work of the seniors and used this purely as a way to build my resume. 
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The resume-building part didn’t really work.<br>
  
  
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I contributed mainly to literature research, and helped with the initial spring-boarding of the counteracts idea. In addition to literature research, I helped with policies and practice by bringing a few individuals for interviews. I also worked part-time on experiments, as I am otherwise known as the "miniprep-machine" </td>
<h5> Why is this page needed? </h5>
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                                                </tr>
<p>The Attribution requirement helps the judges know what you did yourselves and what you had help with. We don't mind if you get help with difficult or complex techniques, but you must report what work your team did and what work was done by others.</p>
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<p>
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                                                    <td>Alvin W.</td>
For example, you might choose to work with an animal model during your project. Working with animals requires getting a license and applying far in advance to conduct certain experiments in many countries. This is difficult to achieve during the course of a summer, but much easier if you can work with a postdoc or PI who has the right licenses.</p>
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                                                    <td>I came into the lab everyday to warm up for a tennis game with exp_mas. Occasionally I read my summer reading. Otherwise, I blended ice cream with apple juice, froze Huiru’s hair with liquid nitrogen, gauged fish eyes without cleaning up, and ordered Pizzahut. In total, I had spent 10 hours of work to make a 2-minute video on how to make nanoparticles. </td>
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                                                    <td>Angela L.</td>
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                                                    <td>I am in charge of Human Practice. Throughout the year, I’ve worked on building programs to educate middle school students about synthetic biology, reaching out to eye doctors and veterinarians, interviewing cataracts patients, planning the bioethics panel, drafting the marketing plan, as well as holding fundraiser events. Other fun stuff I do include being forced by Changsub to clean up the lab for him, accidently leaving my milk from lunch in the minifridge several times, experimental baking with Hellen, failing frosting cupcakes with Huiru, and constantly stealing Dr. Chiang’s candies!  </td>
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                                                    <td>Moksha S.</td>
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                                                    <td>Other than providing sarcastic banter, Indian food, and healthy ego bashing- I focused on making and imaging nanoparticles (our delivery prototype), contacting experts, and organizing fundraisers and public awareness events.  </td>
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                                                    <td>Justin Y.</td>
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                                                    <td>I am the official pipette tip filler, trash dumper and autoclave master (aka “the lab slave”) -- just kidding -- I am in charge of the majority of graphic design, namely the team banner, poster and diagrams on the wiki. If anybody needed a graphic for their section, they came for me. Underneath all the colorful diagrams and cute infographics however, was a whole ton of stress and hard work, but I enjoyed it nonetheless! </td>
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                                                    <td>Megan Y.</td>
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                                                    <td>Aside from creating the marketing plan and taking over HP after the seniors left, during the jamboree, I shared my yummy peanut butter cups with everyone when they were hungry, and I (& Justin) caused the flight delay from JP to Boston:D (if that counts as a contribution) Anyways, I’m glad that I got to go to the jamboree, and I had a great time!!!      </td>
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                                                <tr>
 +
                                                    <td>Leon Y.</td>
 +
                                                    <td>I worked over the summer on cloning and sequencing the parts with extremely large bandwidth. It was a lot of fun and work to get through all the cloning cycles with the team. I also acted as a moral supporter before the final presentation!  </td>
 +
                                                </tr>
 +
                                                                                           
 +
                                               
 +
                                            </tbody>
 +
                                        </table>
 +
                       
 +
                    </div>
 +
                </div>
  
 +
<div class="row" style = "font-size:16px">
 +
<div class="col-sm-12"><br>
 +
                        <h2>Project Attributions</h2>
 +
                        <p>
 +
<ul>
 +
<li>
 +
All lab work was conducted at Taipei American School Sandy R. Puckett Memorial Research Laboratory by team members of the 2016 TAS-Taipei iGEM team, unless stated otherwise
 +
</li>
 +
<br>
 +
<li>
 +
National Yang Ming University - NYMU_Taipei team (<a href = "https://2015.igem.org/Team:TAS_Taipei/Collaborations">click to see collaboration page</a>)
 +
<ul><li>
 +
Consultation for troubleshooting our cloning procedure
 +
</li>
 +
                                <li>Ran summer camp to overview entire iGEm process from start to finish</li>
 +
                                <li>Ran nanoparticle calculator to give advice and troubleshoot problems and misunderstandings</li></ul>
  
<div class="column half_size">
+
</li>
<h5> What should this page have?</h5>
+
                            <br>
 +
                            <li>ASIJ - ASIJ_Tokyo team
 +
                                <ul>
 +
                                    <li>Testing our cataract treatment and prevention calculator and providing user feedback</li>
 +
                                </ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Dr. Jason Cyster - Professor at UCSF University Department of Microbiology and Immunology
 +
                                <ul>
 +
                                    <li>Advice on working with 25HC and exploring its properties in terms of cataracts treatment</li>
 +
                                </ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Dr. Tsu Chieh Cheng - Optomologist at Chang Cheng Eye Hospital
 +
                                <ul>
 +
                                    <li>Information on challenges with current drug delivery systems and cataracts surgery</li>
 +
                                    <li>Feedback on our prototype plan</li>
 +
                                </ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Dr. Wei-Chu Wu - Retina Specialist, Associate Professor at Chang Gung Memorial Hospital
  
<ul>
+
                                <ul><li>Information on current cataracts treatments and post operational complications</li></ul>
<li>General Support</li>
+
                            </li>
<li>Project support and advice</li>
+
                            <br>
<li>Fundraising help and advice</li>
+
                            <li>Dr. Li Guo Min - Veterinarian at Nicholas Animal Hospital
<li>Lab support</li>
+
                                <ul><li>Information on cataract development in animals and current treatments, such as the Ocluvet eye drops</li></ul>
<li>Difficult technique support</li>
+
 
<li>Project advisor support</li>
+
                            </li>
<li>Wiki support</li>
+
                            <br>
<li>Presentation coaching</li>
+
                            <li>Dr. Jason Gestwicki - Professor at UCSF School of Medicine
<li>Human Practices support</li>
+
                                <ul><li>Advice on 25HC regarding protein aggression and molecular interaction</li></ul></li>
<li> Thanks and acknowledgements for all other people involved in helping make a successful iGEM team</li>
+
                            <br>
 +
                            <li>Dr. Eric (Ricky) P. Lee -  Senior member of Technical Staff at Maxim Integrated
 +
                                <ul><li>Assistance with troubleshooting problems encountered during nanoparticle synthesis and protein encapsulation
 +
                                    </li>
 +
                                </ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Mrs. Michelle Bruce - Economics Teacher at Taipei American School
 +
                                <ul><li>Reviewing and providing feedback on our business plan</li></ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Mr. Alexander Kaufman - Former intern at RA Capital
 +
                                <ul><li>Feedback on our business plan</li></ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Dr. Catriona Moran and Mrs. Sharon Clapper
 +
                                <ul><li>Sharing their experiences as cataracts patients and feedback on our final product</li></ul>
 +
                            </li>
 +
<br>
 +
                            <li>Mr. Matthew Fagen - Computer Science and Robotics Chair at Taipei American School
 +
                                <ul><li>Assistance for 3D-printing the contact lens mold </li></ul>
 +
 
 +
                            </li>
 +
                            <br>
 +
                            <li>Mission Biotech
 +
                                <ul><li>Internal cutting sites removal for GSR and CH25H</li></ul>
 +
 
 +
                            </li>
 +
                            <br>
 +
                            <li>Integrated DNA Technologies
 +
                                <ul><li>CH25H gene fragment, CRYAB gene fragment, GFP full construct, CH25H full construct
 +
</li></ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Tri-I biotech
 +
                                <ul>
 +
                                <li>Sequencing and primers synthesis</li>
 +
                                    <li>Primer synthesis to remove stop codon (every gene we ordered)</li>
 +
                                </ul>
 +
                            </li>
 +
                            <br>
 +
                            <li>Origene
 +
                                <ul><li>cDNA for CRYAA and GSR</li>
 
</ul>
 
</ul>
 +
                            </li>
 +
<br>
 +
 +
<br>
 +
 +
<br>
 +
<li>
 +
People involved in our bioethics panel
 +
<ul>
 +
                                    <li>Mr. Steve Anderson</li>
 +
                                    <li>Ms. Anisha Vinod</li>
 +
<li>Dr. Nathaniel Smith</li>
 +
<li>Dr. Evonne Vidal</li>
 +
                                    <li>Mr. Brandon Maguire</li>
 +
<li>Dr. Annemarie Costello</li>
 +
 +
 +
</ul>
 +
</li>
 +
<br>
 +
</ul>
 +
 +
 +
<br>
 +
 +
Some parts of this wiki have been derived from the 2014 and 2015 TAS_Taipei wiki, which was designed entirely by the 2014 and 2015 teams.
 +
<br>
 +
                       
 +
                        All aspects of experimental, modeling, and human practice were conceived and performed by students of the 2016 team, and are independent from the research performed by the 2014 and 2015 team.
 +
<br>
 +
 +
<ul>
 +
<li>
 +
DR. SHARON HENNESSY, TAS SUPERINTENDENT
 +
</li>
 +
<li>
 +
DR. RICHARD HARTZELL, TAS UPPER SCHOOL PRINCIPAL
 +
</li>
 +
<li>
 +
FRIENDS OF TAS
 +
</li>
 +
</ul>
 +
<br>
 +
<p>A huge thank you to our collaborators and sponsors.</p>
 +
<br>
 +
                        </p>
 +
</div>
 +
</div>
 +
 +
<div class="row">
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/b/b0/Attr_yangMing.gif" alt="">
 +
</div>
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/c/c7/Attr_biobuilder.png" alt="">
 +
</div>
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/f/f7/Attr_geneaid.png" alt="">
 +
</div>
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/7/78/Attr_trii.jpg" alt="">
 +
</div>
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/3/3e/Attr_mission.gif" alt="">
 +
</div>
 +
<div class="col-sm-4">
 +
<img src="https://static.igem.org/mediawiki/2015/b/ba/Attr_sino.png" alt="">
 +
</div>
 +
 +
</div>
 +
 +
</div>
 +
 +
</div>
 +
    </div>
 +
 +
<br>
 +
<br><br>
 +
 +
<canvas id="canvas-container" style = "z-index:-1"></canvas>
 +
<script type="text/javascript" src='https://2016.igem.org/Template:TAS_Taipei/js/field?action=raw&ctype=text/javascript'></script>
 +
 +
</body>
 +
 +
 +
 +
 +
 +
 +
 +
 +
<style type='text/css'>
 +
    #bg { position: fixed; top: 0; left: 0; }
 +
    .bgwidth { width: 100%; }
 +
    .bgheight { height: 100%; }
 +
</style>
 +
 +
<div class="backgroundpic">
 +
<img src="https://static.igem.org/mediawiki/2016/e/e5/T--TAS_Taipei--Taipei_Background_1.0.jpg" style="z-index:0" width="100%" height="100%" id="bg" alt="" >
 
</div>
 
</div>
  
 +
<script>
 +
var nowRadius = 0
 +
$(function() {
 +
    if (screen.width > 1800)
 +
      $("#slideoutco").fadeOut(0);
 +
    $({blurRadius: 0}).animate({blurRadius: 10}, {
 +
        duration: 20000,
 +
        easing:'swing', // or "linear"
 +
                        // use jQuery UI or Easing plugin for more options
 +
        step: function() {
 +
            console.log(this.blurRadius);
 +
            if ($("#bluebutton").hasClass("isOn") ) {return;};
 +
            if($('#redbutton').hasClass("isOn") ) {return;}
 +
            $('.backgroundpic').css({
 +
                "-webkit-filter": "blur("+this.blurRadius+"px)",
 +
                "filter": "blur("+this.blurRadius+"px)"
  
<div class="clear"></div>
+
            });
 +
            nowRadius = this.blurRadius;
 +
        var LOCSnum = Math.round(nowRadius*6/9);
 +
        var NineLOCSnum = Math.round(nowRadius*6/9*10);
 +
        /**if (NineLOCSnum > 20) switchMessage("YELLOW","<b> Oh no! </b> Cataracts are forming! Click on the Eyedrop Tab and get <b>TREATMENT</b> eyedrops!", currentColor()=="GREEN");
 +
        if (NineLOCSnum == 55) $("#slideoutco").fadeOut(1000);
 +
        if (NineLOCSnum > 60) switchMessage("RED","Your cataracts are very severe. You need to get TREATMENT fast by clicking the Eyedrop Tab", currentColor()=="YELLOW");*/
 +
        if (LOCSnum > 6) {LOCSnum = "6+"; $('#LOCS').text(LOCSnum+"");}
 +
        else $('#LOCS').text(LOCSnum+"");
 +
       
 +
        if (LOCSnum ==0) document.getElementById('bluebutton').click();
 +
        }
 +
    });
  
<div class="column half_size">
+
});
  
<div class="highlight">
+
startBlur= function(speed) {
<h5> Can we base our project on a previous one? </h5>
+
    $({blurRadius: nowRadius}).animate({blurRadius: 10}, {
<p>Yes! You can have a project based on a previous team, or based on someone else's idea, <b>as long as you state this fact very clearly and give credit for the original project.</b> </p>
+
        duration: speed,
 +
        easing: 'swing', // or "linear"
 +
                        // use jQuery UI or Easing plugin for more options
 +
        step: function() {
 +
            console.log(this.blurRadius);
 +
            if ($("#bluebutton").hasClass("isOn") ) {return;};
 +
            if($('#redbutton').hasClass("isOn") ) {return;}
 +
 
 +
            $('.backgroundpic').css({
 +
                "-webkit-filter": "blur("+this.blurRadius+"px)",
 +
                "filter": "blur("+this.blurRadius+"px)"
 +
 
 +
            });
 +
 
 +
        nowRadius = this.blurRadius;
 +
        var LOCSnum = Math.round(nowRadius*6/9);
 +
        var NineLOCSnum = Math.round(nowRadius*6/9*10);
 +
        /**if (NineLOCSnum == 15) $("#slideoutco").fadeOut(400);
 +
        if (NineLOCSnum > 20) switchMessage("RED","<b>Cataracts</b> are creeping back again! Click the PREVENTION eye drop to add GSR into your eyes!", currentColor()=="BLUE");*/
 +
        if (LOCSnum > 6) {LOCSnum = "6+"; $('#LOCS').text(LOCSnum+"");}
 +
        else $('#LOCS').text(LOCSnum+" ");
 +
       
 +
       
 +
        }
 +
    });
 +
};
 +
 
 +
stopBlur= function(speed) {
 +
 
 +
    $({blurRadius: nowRadius}).animate({blurRadius: 0}, {
 +
        duration: speed,
 +
        easing: 'swing', // or "linear"
 +
                        // use jQuery UI or Easing plugin for more options
 +
        step: function() {
 +
            console.log(this.blurRadius);
 +
        if ($("#redbutton").hasClass("isOn") ) {} else{return;};
 +
            $('.backgroundpic').css({
 +
                "-webkit-filter": "blur("+this.blurRadius+"px)",
 +
                "filter": "blur("+this.blurRadius+"px)"
 +
 
 +
            });
 +
        nowRadius = this.blurRadius;
 +
        var LOCSnum = Math.round(nowRadius*6/9);
 +
        var NineLOCSnum = Math.round(nowRadius*6/9*10);
 +
         
 +
        /**if (NineLOCSnum < 68){ if (NineLOCSnum > 10) if(currentColor()=="RED" ||  currentColor() == "BLUE") $("#slideoutco").fadeOut(0); switchMessage("YELLOW","<b> Treating</b> your cataract with <b>25HC Eyedrops </b>", currentColor()=="RED");
 +
                              }
 +
        if (NineLOCSnum == 9) $("#slideoutco").fadeOut(0);
 +
       
 +
           
 +
        if (NineLOCSnum < 5) {
 +
            if ($("#bluebutton").hasClass("isOn")){
 +
                   
 +
                switchMessage("GREEN","<b>Your eyes are <i>pernamently</i> crystal clear!</b> Treatment is not needed, so don't forget to turn it off!. Click the question mark to learn more.", currentColor()=="BLUE")
 +
            }
 +
            else switchMessage("BLUE","Your eyes are crystal clear! To avoid waste, please turn off the <b>TREATMENT</b> eyedrop.", currentColor()=="YELLOW");
 +
        }*/
 +
        if (LOCSnum > 6) LOCSnum = "6+";
 +
        else LOCSnum = LOCSnum +" ";
 +
        $('#LOCS').text(LOCSnum+"");   
 +
       
 +
        }
 +
    });
 +
   
 +
   
 +
};
 +
 
 +
function chooseBlur() {
 +
  if ($("#redbutton").hasClass("isOn") )
 +
      {
 +
      stopBlur(4500);
 +
 
 +
            }
 +
 
 +
    else {
 +
            if($("#bluebutton").hasClass("isOn") ) {}
 +
            else {startBlur(12000);}
 +
          }
 +
    /**if (!$("#redbutton").hasClass("isOn"))
 +
        if ($("#bluebutton").hasClass("isOn"))
 +
            {
 +
                $("#slideoutco").fadeOut(0);
 +
                switchMessage("BLUE","Great! Furthur cataract formation is prevented with GSR Eyedrops. Now use <b>TREATMENT</b> eyedrops one last time.", currentColor()=="RED")
 +
            }*/
 +
};
 +
 
 +
 
 +
</script>
 +
 
 +
<script>
 +
 
 +
function switchToggleB() {
 +
    if ( $("#bluebutton").hasClass("isOn") ) {
 +
        $("#bluebutton").removeClass("isOn"); }
 +
  else { $("#bluebutton").addClass("isOn"); }
 +
};
 +
function switchToggleR() {
 +
    if ( $("#redbutton").hasClass("isOn") ) {
 +
        $("#redbutton").removeClass("isOn"); }
 +
  else { $("#redbutton").addClass("isOn"); }
 +
};
 +
   
 +
function currentColor() {
 +
    if ($("#slidecontenttext").hasClass("alert-danger"))
 +
        return "RED";
 +
    if ($("#slidecontenttext").hasClass("alert-warning"))
 +
        return "YELLOW";
 +
    if ($("#slidecontenttext").hasClass("alert-info"))
 +
        return "BLUE";
 +
    if ($("#slidecontenttext").hasClass("alert-success"))
 +
        return "GREEN";
 +
    else return "NONE"
 +
};
 +
function switchMessage(color, textInside, refresh) {
 +
    var entirebox = document.getElementById("slideoutco");
 +
 
 +
    if (refresh)
 +
    {$(entirebox).fadeOut(100);
 +
    if ($("#slidecontenttext").hasClass("alert-danger"))
 +
        $("#slidecontenttext").removeClass("alert-danger");
 +
    if ($("#slidecontenttext").hasClass("alert-warning"))
 +
        $("#slidecontenttext").removeClass("alert-warning");
 +
    if ($("#slidecontenttext").hasClass("alert-info"))
 +
        $("#slidecontenttext").removeClass("alert-info");
 +
    if ($("#slidecontenttext").hasClass("alert-success"))
 +
        $("#slidecontenttext").removeClass("alert-success");
 +
    if (color == "RED")
 +
        $("#slidecontenttext").addClass("alert-danger");
 +
    if (color == "YELLOW")
 +
        $("#slidecontenttext").addClass("alert-warning");
 +
    if (color == "BLUE")
 +
        $("#slidecontenttext").addClass("alert-info");
 +
    if (color == "GREEN")
 +
        $("#slidecontenttext").addClass("alert-success");
 +
   
 +
   
 +
    $("#slidecontenttext").html(textInside);
 +
    $(entirebox).fadeIn(500);
 +
    }
 +
   
 +
};
 +
 
 +
 
 +
</script>
 +
 
 +
 
 +
 
 +
 
 +
 
 +
 
 +
<canvas id="canvas-container" style = "z-index:-1" hidden></canvas>
 +
<script type="text/javascript" src='https://2015.igem.org/Template:TAS_Taipei/js/field?action=raw&ctype=text/javascript' hidden></script/>
 +
 
 +
 
 +
 
 +
<script type="text/javascript">
 +
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 +
var acc = document.getElementsByClassName("accordion");
 +
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 +
 
 +
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 +
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 +
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 +
 
 +
<script type="text/javascript">
 +
$("#category_navbar a").on('click', function(event) {
 +
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 +
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 +
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 +
 
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      // Using jQuery's animate() method to add smooth page scroll
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 +
      $('html, body').animate({
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 +
 
 +
 
 +
</script>
 +
 
 +
<div id="slideout">
 +
    <div id="slidecontent">
 +
        <h3>Prevention</h3>
 +
        <h5>GSR Eyedrop</h5>
 +
        <label class="switch">
 +
            <input id="bluebutton" onClick="switchToggleB(); chooseBlur()" type="checkbox">
 +
            <div class="slider round bluecolorbutton"></div>
 +
        </label>
 +
<br>
 +
 
 +
        <h3>Treatment</h3>
 +
        <h5>25HC Eyedrop</h5>
 +
        <label class="switch">
 +
            <input id="redbutton" onClick="switchToggleR(); chooseBlur()" type="checkbox">
 +
            <div class="slider round redcolorbutton"></div>
 +
        </label>
 +
        <h4><b> LOCS: <span id="LOCS">0 &#160;</span></b> &#160; &#160; <a href="https://2016.igem.org/Team:TAS_Taipei/Wiki_Standard_Pages#Animation"><button  type="button" class="btn btn-danger btn-md">?</button> </a>
 +
 
 +
    </div>
 +
    <div id="clickme">
 +
    <h2 class="vertical-text" style="Lato" !important>
 +
            <br> Eyedrops
 +
    </h2>
 +
        <br><br><br>
 +
       
 +
    </div>
 
</div>
 
</div>
 +
 +
<div id="slideoutco">
 +
    <div id="slidecontentco">
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        <div id="slidecontenttext" class="alert alert-danger">
 +
            <p style="font-size:14px !important"> <a href="#" class="close" data-dismiss="alert">&times;</a>
 +
                <strong>Zoom out to see animation.</strong> &#160; &#160; &#160; &#160; &#160;<a href="https://2016.igem.org/Team:TAS_Taipei/Wiki_Standard_Pages#Animation"><button  type="button" class="btn btn-danger btn-sm">?</button> </a><span style="font-size:14px"><br>Your screen resolution is too low unless you zoom out </span></p>
 +
           
 +
        </div>
 +
    </div>
 
</div>
 
</div>
  
 +
<javascript>
 +
   
 +
</javascript>
  
<div class="column half_size">
+
<style type='text/css'>
  
<h5>Inspiration</h5>
+
#slideout {
<p>Take a look at what other teams have done:</p>
+
    background: #FFD700;
<ul>
+
    position: fixed;
<li><a href="https://2011.igem.org/Team:Imperial_College_London/Team">2011 Imperial College London</a> (scroll to the bottom)</li>
+
    height: 300px;
<li><a href="https://2014.igem.org/Team:Exeter/Attributions">2014 Exeter </a></li>
+
    width: 200px;
<li><a href="https://2014.igem.org/Team:Melbourne/Attributions">2014 Melbourne </a></li>
+
    top: 30%;
<li><a href="https://2014.igem.org/Team:Valencia_Biocampus/Attributions">2014 Valencia Biocampus</a></li>
+
    right:-150px;
</ul>
+
    padding-left: 60px;
 +
    z-index:30;
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    border-radius: 25px;
  
</div>
 
  
<div class="clear"></div>
+
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 +
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    height: 200px;
 +
    width: 300px;
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 +
    padding-right: 10px;
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    border-radius: 10px;
 +
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 +
   
 +
#clickme {
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 +
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 +
    z-index:30;
 +
    border-radius: 25px 5px 5px 25px;
 +
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<div class="column half_size">
+
#slidecontent {
 +
    float:left;
 +
}
 +
   
 +
#slidecontentco {
 +
    float:left;
 +
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<h5>Team training and Project start</h5>
+
.vertical-text {
<p>Tell us if your institution teaches an iGEM or synthetic biology class and when you started your project:</p>
+
transform: rotate(90deg);
<ul>
+
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<li>Does your institution teach an iGEM or synthetic biology course?</li>
+
  float: left;
<li>When did you start this course?</li>
+
}
<li>Are the syllabus and course materials freely available online?</li>
+
/* The switch - the box around the slider */
<li>When did you start your brainstorming?</li>
+
.switch {
<li>When did you start in the lab?</li>
+
  position: relative;
<li>When did you start working on  your project?</li>
+
  display: inline-block;
 +
  width: 60px;
 +
  height: 34px;
 +
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</ul>
+
/* Hide default HTML checkbox */
 +
.switch input {display:none;}
  
</div>
+
/* The slider */
 +
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 +
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 +
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 +
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 +
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 +
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 +
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 +
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</html>

Latest revision as of 03:54, 3 December 2016

Attributions - TAS Taipei iGEM Wiki





Attributions

Team Member Attributions

The members were asked to describe their individual contributions to create this team project. This included how they contributed to the research, experimentation, and presentation of our project, as well as how they contributed to make this year's journey an unforgettable one.

Below are the responses. Unfortunately, not all members were able to respond, though we still thank everyone involved in our project for their contributions.

Name Description
Huiru H. I am the co-project head with Fiona, and I focused mainly on building BioBrick constructs, testing proof of concept, and making contact lens prototypes. I’m also in charge of eating most of the failed cupcakes and dancing with a helmet on in the lab because biosafety.
Changsun L. I am one of the experiment heads and I worked on building Biobrick constructs, finalizing the chitosan nanoparticle procedures and devising protein release experiment. I also worked on miniprep purifying the proteins produced from our BioBrick constructs. I wanted to find a treatment for cataracts because it is the leading cause of blindness according to WH2O2.
Fiona T. I had a ton of fun (and stress) building and documenting DNA parts, adding compounds into cataracts model, and purifying proteins that didn’t get eluted!
Avery W. I was in charge of modeling and wiki. People who visited our poster should recognize me by the sign I held: “Ask me about my modeling! ☺ For modeling, I researched, coded, analyzed, and typed all five mathematical models on prototype design, and built the nanoparticle calculator (software). For wiki, I coded the wiki HTML/CSS/JS pages, including the cataracts animation in the background that sadly no one noticed. I was also in charge of setting and enforcing deadlines for wiki pages, which as expected did not work out.
When my eyes started to hurt after staring at a laptop screen, I played a crucial role in experiments serving as a secondary eppendorf holder, during which I patiently listened to Changsun or Huiru’s complaints about their experiments (and usually making them even more frustrated). I also documented the entire Boston trip through my selfies (see example).
Dennis J. I am the safety head. I contributed other members in their experiments, research, and modeling. You have to remember, looks are deceiving, so do not forget to check your lab benches twice!
Austin L. I free-rided on all the hard work of the seniors and used this purely as a way to build my resume. The resume-building part didn’t really work.
I contributed mainly to literature research, and helped with the initial spring-boarding of the counteracts idea. In addition to literature research, I helped with policies and practice by bringing a few individuals for interviews. I also worked part-time on experiments, as I am otherwise known as the "miniprep-machine"
Alvin W. I came into the lab everyday to warm up for a tennis game with exp_mas. Occasionally I read my summer reading. Otherwise, I blended ice cream with apple juice, froze Huiru’s hair with liquid nitrogen, gauged fish eyes without cleaning up, and ordered Pizzahut. In total, I had spent 10 hours of work to make a 2-minute video on how to make nanoparticles.
Angela L. I am in charge of Human Practice. Throughout the year, I’ve worked on building programs to educate middle school students about synthetic biology, reaching out to eye doctors and veterinarians, interviewing cataracts patients, planning the bioethics panel, drafting the marketing plan, as well as holding fundraiser events. Other fun stuff I do include being forced by Changsub to clean up the lab for him, accidently leaving my milk from lunch in the minifridge several times, experimental baking with Hellen, failing frosting cupcakes with Huiru, and constantly stealing Dr. Chiang’s candies!
Moksha S. Other than providing sarcastic banter, Indian food, and healthy ego bashing- I focused on making and imaging nanoparticles (our delivery prototype), contacting experts, and organizing fundraisers and public awareness events.
Justin Y. I am the official pipette tip filler, trash dumper and autoclave master (aka “the lab slave”) -- just kidding -- I am in charge of the majority of graphic design, namely the team banner, poster and diagrams on the wiki. If anybody needed a graphic for their section, they came for me. Underneath all the colorful diagrams and cute infographics however, was a whole ton of stress and hard work, but I enjoyed it nonetheless!
Megan Y. Aside from creating the marketing plan and taking over HP after the seniors left, during the jamboree, I shared my yummy peanut butter cups with everyone when they were hungry, and I (& Justin) caused the flight delay from JP to Boston:D (if that counts as a contribution) Anyways, I’m glad that I got to go to the jamboree, and I had a great time!!!
Leon Y. I worked over the summer on cloning and sequencing the parts with extremely large bandwidth. It was a lot of fun and work to get through all the cloning cycles with the team. I also acted as a moral supporter before the final presentation!

Project Attributions

  • All lab work was conducted at Taipei American School Sandy R. Puckett Memorial Research Laboratory by team members of the 2016 TAS-Taipei iGEM team, unless stated otherwise

  • National Yang Ming University - NYMU_Taipei team (click to see collaboration page)
    • Consultation for troubleshooting our cloning procedure
    • Ran summer camp to overview entire iGEm process from start to finish
    • Ran nanoparticle calculator to give advice and troubleshoot problems and misunderstandings

  • ASIJ - ASIJ_Tokyo team
    • Testing our cataract treatment and prevention calculator and providing user feedback

  • Dr. Jason Cyster - Professor at UCSF University Department of Microbiology and Immunology
    • Advice on working with 25HC and exploring its properties in terms of cataracts treatment

  • Dr. Tsu Chieh Cheng - Optomologist at Chang Cheng Eye Hospital
    • Information on challenges with current drug delivery systems and cataracts surgery
    • Feedback on our prototype plan

  • Dr. Wei-Chu Wu - Retina Specialist, Associate Professor at Chang Gung Memorial Hospital
    • Information on current cataracts treatments and post operational complications

  • Dr. Li Guo Min - Veterinarian at Nicholas Animal Hospital
    • Information on cataract development in animals and current treatments, such as the Ocluvet eye drops

  • Dr. Jason Gestwicki - Professor at UCSF School of Medicine
    • Advice on 25HC regarding protein aggression and molecular interaction

  • Dr. Eric (Ricky) P. Lee - Senior member of Technical Staff at Maxim Integrated
    • Assistance with troubleshooting problems encountered during nanoparticle synthesis and protein encapsulation

  • Mrs. Michelle Bruce - Economics Teacher at Taipei American School
    • Reviewing and providing feedback on our business plan

  • Mr. Alexander Kaufman - Former intern at RA Capital
    • Feedback on our business plan

  • Dr. Catriona Moran and Mrs. Sharon Clapper
    • Sharing their experiences as cataracts patients and feedback on our final product

  • Mr. Matthew Fagen - Computer Science and Robotics Chair at Taipei American School
    • Assistance for 3D-printing the contact lens mold

  • Mission Biotech
    • Internal cutting sites removal for GSR and CH25H

  • Integrated DNA Technologies
    • CH25H gene fragment, CRYAB gene fragment, GFP full construct, CH25H full construct

  • Tri-I biotech
    • Sequencing and primers synthesis
    • Primer synthesis to remove stop codon (every gene we ordered)

  • Origene
    • cDNA for CRYAA and GSR



  • People involved in our bioethics panel
    • Mr. Steve Anderson
    • Ms. Anisha Vinod
    • Dr. Nathaniel Smith
    • Dr. Evonne Vidal
    • Mr. Brandon Maguire
    • Dr. Annemarie Costello


Some parts of this wiki have been derived from the 2014 and 2015 TAS_Taipei wiki, which was designed entirely by the 2014 and 2015 teams.
All aspects of experimental, modeling, and human practice were conceived and performed by students of the 2016 team, and are independent from the research performed by the 2014 and 2015 team.
  • DR. SHARON HENNESSY, TAS SUPERINTENDENT
  • DR. RICHARD HARTZELL, TAS UPPER SCHOOL PRINCIPAL
  • FRIENDS OF TAS

A huge thank you to our collaborators and sponsors.





Prevention

GSR Eyedrop

Treatment

25HC Eyedrop

LOCS: 0      


Eyedrops




× Zoom out to see animation.          
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