Vector Construction

Vectors of α-tubulin, β-tubulin, n-luciferase, c-luciferase

Gene fragments of α-tubulin、β-tubulin、n-luciferase、c-luciferase were amplified via PCR and verified by electrophoresis(Fig.1). The theoretic gene size of α-tubulin is 1356bp, β-tubulin is 1335bp, n-luciferase is 1248bp, c-luciferase is 459bp, which matched our experimental results.

Gene fragments were ligated to E.coli expression plasmid pET30a(+), after transformation, colony PCR was done to verify the efficiency(Fig.2A and 2B). Meanwhile, the sequencing results further confirmed that we successfully cloned the α-tubulin, β-tubulin, n-luciferase, c-luciferase expression vectors.

Fusion Protein Vectors

By fusion PCR technology

α-tubulin-YNE, YNE-α-tubulin, α-tubulin-YCE, YCE-α-tubulin, β-tubulin-YNE, YNE-β-tubulin, β-tubulin-YCE, YCE-β-tubulin, α-tubulin-nluc, nluc-α-tubulin, α-tubulin-cluc and cluc-α-tubulin were cloned respectively via fusion PCR. After ligating these fusion gene fragments to pET30a(+) empty vectors, we transformed the target plasmids to Trans5α. When colony PCR was done for screening, we picked correct colonies shown in SDS-PAGE (Fig.3) for plasmid amplification.

Sequencing results further confirmed that α-tubulin-YNE, YNE-α-tubulin, α-tubulin-YCE, YCE-α-tubulin, β-tubulin-YCE, YCE-β-tubulin, α-tubulin-nluc and cluc-α-tubulin expression vectors were constructed successfully.

By Gateway Technology

We also tried to construct fusion protein vectors by Gateway Large-scale Cloning technology. We used Invitrogen pENTR/D TOPO to clone β-tubulin into entry vector. Primers were designed based on β-tubulin sequence and PCR was done for verification. Electrophoresis result (Fig.4) showed that β-tubulin was successfully cloned into the entry vector.

In order to do LR reaction, we used the restriction endonuclease Not I to digest the entry vector. Electrophoresis result (Fig.5) showed that single digestion was efficient.

Using Invitrogen Gateway LR Clonase II Enzyme Mix, the entry vectors were ligated with pCambia1300-nluc and pCambia1300-cluc respectively. Thus the destination vectors were complete. After transformation and running PCR with β-tubulins primers, electrophoresis result (Fig.6) showed high positive rates, indicating β-tubulins was successfully cloned into the vectors.

Also, signaling fragments were also need to be tested. By using the reverse primer of β-tubulin and the forward primer of cluc for PCR verification, we found that cluc-β-tubulin fusion protein vector is successfully constructed. Electrophoresis result is shown in Fig.7.

In conclusion, we successfully cloned nine fusion protein vectors. α-tubulin-YNE, YNE-α-tubulin, α-tubulin-YCE, YCE-α-tubulin, β-tubulin-YCE, YCE-β-tubulin, α-tubulin-nluc, and cluc-α-tubulin were ligated to pET30(+) . β-tubulin was cloned to pCambia-cluc plasmid as a form of cluc-β-tubulin fusion protein vector.

Protein Expression

In TranB(DE3) E.coli expression strain

Expression vectors were transformed into E.coli expression strain TranB(DE3). After culturing, we firstly tested the effect of IPTG inducement. β-tubulin was taken as an example. SDS-PAGE(Fig.8) showed that IPTG is very significant in the expressing process.

Fig.8

Then we checked the protein expression predicted website http://www.biotech.ou.edu/. It showed that our fusion protein would probably expressed as inclusion bodies. We therefore renatured the inclusion bodies and verified through SDS-PAGE(Fig.9).

Also, western-blot(Fig.10) were done to test the protein from supernatant, pellet and renatured inclusion body.

In Rossata(DE3) E.coli expression strain

Rossatta(DE3) is a kind of E.coli strain that can express rare codons and improve the expression level of eukaryotic protein. Thus we applied this strain to optimize our protein expression.

SDS-PAGE were done to verify the expression results before(Fig.11) and after(Fig.12) breaking the bacteria, and Western blot(Fig.13) was also applied for the further confirmation.

fig.13

Based on the results above, we could confirm that α-tubulin， β-tubulin，α-tubulin-YNE, YNE-α-tubulin, α-tubulin-YCE, YCE-α-tubulin, β-tubulin-YCE, YCE-β-tubulin, cluc-α-tubulin fusion protein were successfully expressed in rossata cell.

Particularly, according to figure 7B, the target proteins (β-tubulin and β-tubulin-YCE) can be tested out in the supernatant, indicating that they are soluble when expressed in rossatta strain.

We collaborated with Fujian Agriculture and Forest University and asked them to test the interaction between α and β-tubulin. Thus verified the activity of tubulin monomers.

Results of tublin extraction in vitro

After successfully extracting tubulin from porcine brains, we tried to summarize the aggregation condition in vitro by using electron microscope.

Fig.15

From pictures taken under the electron microscope(Fig.15), we could see tublin (treated with 1 μM taxol) in aggregated form obviously, indicating we have achieved the aggregation process in vitro. However, due to the high concentration of our extracted sample, it was hard to tell the aggregated length and the quantity of microtubules. Thus we tried to use spectrophotometer to measure OD₃₅₀ of our experimental samples.

Table 1 OD₃₅₀ of microtubule samples treated with serial concentration of taxol

From the results shown in table 1, we found that there was no obvious relationship between OD statistics and taxol concentration. The reason may be the machine issue. Due to the wave length for measuring OD is 350nm, which is between the ultraviolet light and visible light, there is a high requirement for instruments and always leads to a huge deviation. As the high technologic instruments could not be owned by every laboratory in different areas, our fusion proteins which can detect the relatively accurate concentration of anti-microtubule drugs will have a broad application prospect.