Difference between revisions of "Team:SUSTech Shenzhen/Description"

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= Idea =
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= Inspiration =
  
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There are 360 million hearing-impaired people around the world, accounting for 5% of the world’s total population. There are 15.84% of people with hearing impairment in China and the number of people suffering from disabling hearing loss, that is, people with moderate hearing loss, accounted for 5.17%. Inspired by these data, we hope to make people better understand the mechanism of hearing, touching and other feelings through our research, so that we can provide new therapeutic targets on related diseases. We decided to use synthetic biology methods to explore how cells sense mechanical stress, such as sound wave. Traditional gene expression regulation techniques, for example, optogenetics and chemical genetics, are commonly used in biological science but with certain limitations. Here we design a new way, audiogenetics, by which we can not only regulate gene expression in cells precisely and nontoxically, but also have an in-depth and comprehensive understanding of our feelings.
  
= Description =
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= Research =
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Here we designed a new way called audiogenetics, to precisely and nontoxically regulate the gene expression in cells. It used a membrane mechanosensitive channel, transient receptor potential channel 5 (TRPC5), and mammalian mechanosensitive Piezo1 channel, to transform the audio wave energy as the extracellular input signal into intracellular downstream signal. Also, we quantitatively examine the sensibility of TRPC5 and Piezo to mechanical stress by using microfluidics and hypoosmolarity.
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To make TRPC5 more sensitive to mechanical stress, we use protein engineering by evolution to get a mutated TRPC5 with a high sensitivity to mechanical stress. The downstream signal is calcium ion, which is a second messenger in cells and we use calcium indicator (R-GECO) to quantify the intracellular calcium using live cell image. Cytosolic calcium regulates a series of phosphorylation and we know that it can induce specific promoters (PNFAT) transgene expression. Finally, we use GFP as the output signal to quantitatively analyze the regulatory ability of audiogenetics.
  
 
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Revision as of 06:26, 11 October 2016

Team SUSTC-Shenzhen

Description

Project

Formula of Feeling Sound

Sound = Wave = Vibration NFAT + Gene = Regulation IonChannel + = Feeling CaInflux + Direct Evolution Measurement Plasmid Construction

Inspiration

There are 360 million hearing-impaired people around the world, accounting for 5% of the world’s total population. There are 15.84% of people with hearing impairment in China and the number of people suffering from disabling hearing loss, that is, people with moderate hearing loss, accounted for 5.17%. Inspired by these data, we hope to make people better understand the mechanism of hearing, touching and other feelings through our research, so that we can provide new therapeutic targets on related diseases. We decided to use synthetic biology methods to explore how cells sense mechanical stress, such as sound wave. Traditional gene expression regulation techniques, for example, optogenetics and chemical genetics, are commonly used in biological science but with certain limitations. Here we design a new way, audiogenetics, by which we can not only regulate gene expression in cells precisely and nontoxically, but also have an in-depth and comprehensive understanding of our feelings.

Research

Here we designed a new way called audiogenetics, to precisely and nontoxically regulate the gene expression in cells. It used a membrane mechanosensitive channel, transient receptor potential channel 5 (TRPC5), and mammalian mechanosensitive Piezo1 channel, to transform the audio wave energy as the extracellular input signal into intracellular downstream signal. Also, we quantitatively examine the sensibility of TRPC5 and Piezo to mechanical stress by using microfluidics and hypoosmolarity.

To make TRPC5 more sensitive to mechanical stress, we use protein engineering by evolution to get a mutated TRPC5 with a high sensitivity to mechanical stress. The downstream signal is calcium ion, which is a second messenger in cells and we use calcium indicator (R-GECO) to quantify the intracellular calcium using live cell image. Cytosolic calcium regulates a series of phosphorylation and we know that it can induce specific promoters (PNFAT) transgene expression. Finally, we use GFP as the output signal to quantitatively analyze the regulatory ability of audiogenetics.

Made by from the iGEM team SUSTech_Shenzhen.

Licensed under CC BY 4.0.