Difference between revisions of "Team:ShanghaitechChina/Hydrogen"

Line 44: Line 44:
  
 
<figure align="center">
 
<figure align="center">
−
<img src="https://static.igem.org/mediawiki/2015/9/9e/Heidelberg_media_pictures_aachen.png" style="width:100%;">
+
<img src="https://static.igem.org/mediawiki/2015/9/9e/Heidelberg_media_pictures_aachen.png" style="width:50%;">
 
<figcaption>
 
<figcaption>
 
<b>Fig. 1</b>The reversible oxidation of molecular hydrogen.
 
<b>Fig. 1</b>The reversible oxidation of molecular hydrogen.

Revision as of 10:55, 15 October 2016

igem2016:ShanghaiTech

Motivation of Hydrogenase

Hydrogenase is an enzyme that catalyses the reversible oxidation of molecular hydrogen (H2). (Figure1)

Fig. 1The reversible oxidation of molecular hydrogen.

Hydrogenase can be sub-classified into three different types based on the active site metal content: iron-iron hydrogenase ([FeFe] hydrogenase), nickel-iron hydrogenase ([NiFe] hydrogenases), and iron hydrogenase. In contrast to [NiFe] hydrogenases, [FeFe] hydrogenases are generally more active in production of molecular hydrogen. Turnover frequency (TOF) in the order of 10,000 s−1 have been reported in literature for [FeFe] hydrogenases from Clostridium pasteurianum.[1] This has led to intense research focusing on the use of [FeFe] hydrogenase for sustainable production of H2.[2]

Normal E. Coli bacteria contain [NiFe] hydrogenase, but the activity and expressive rate is non-obvious. For the above reasons, we decided to construct [FeFe] hydrogenases gene cluster for sustainable production of H2.

Fig. 1:Big Picture of Biofilm Part.

The main functional catalytic group in [FeFe]-hydrogenase is considered to be an iron-sulfur cluster domain with a di-iron center covalently linked to a dithiolate group.

At molecular level, the gene sequences involved in producing hydrogenase in different species vary wildly. In our study, we focus on hydrogenase gene cluster from Clostridium. acetobutylicum. The important genes include hydA, hydEF, hydG, which are expressed as HydA, HydE and HydF, HydG respectively. We will briefly introduce these enzymes below.

Title

An article (abbreviated to ART) is a word (prefix or suffix) that is used alongside a noun to indicate the type of reference being made by the noun. Articles specify grammatical definiteness of the noun, in some languages extending to volume or numerical scope. The articles in the English language are the and a/an, and (in certain contexts) some. "An" and "a" are modern forms of the Old English "an", which in Anglian dialects was the number "one" (compare "on", in Saxon dialects) and survived into Modern Scots as the number "owan". Both "on" (respelled "one" by the Normans) and "an" survived into Modern English, with "one" used as the number and "an" ("a", before nouns that begin with a consonant sound) as an indefinite article.In many languages, articles are a special part of speech, which cannot easily be combined with other parts of speech. In English, articles are frequently
An article (abbreviated to ART) is a word (prefix or suffix) that is used alongside a noun to indicate the type of reference being made by the noun. Articles specify grammatical definiteness of the noun, in some languages extending to volume or numerical scope. The articles in the English language are the and a/an, and (in certain contexts) some. "An" and "a" are modern forms of the Old English "an", which in Anglian dialects was the number "one" (compare "on", in Saxon dialects) and survived into Modern Scots as the number "owan". Both "on" (respelled "one" by the Normans) and "an" survived into Modern English, with "one" used as the number and "an" ("a", before nouns that begin with a consonant sound) as an indefinite article.In many languages, articles are a special part of speech, which cannot easily be combined with other parts of speech. In English, articles are
An article (abbreviated to ART) is a word (prefix or suffix) that is used alongside a noun to indicate the type of reference being made by the noun

title

An article (abbreviated to ART) is a word (prefix or suffix) that is used alongside a noun to indicate the type of reference being made by the noun. Articles specify grammatical definiteness of the noun, in some languages extending to volume or numerical scope. The articles in the English language are the and a/an, and (in certain contexts) some. "An" and "a" are modern forms of the Old English "an", which in Anglian dialects was the number "one" (compare "on", in Saxon dialects) and survived into Modern Scots as the number "owan". Both "on" (respelled "one" by the Normans) and "an" survived into Modern English, with "one" used as the number and "an" ("a", before nouns that begin with a consonant sound) as an indefinite article.In many languages, articles are a special part of speech, which cannot easily be combined with other parts of speech. In English, articles are frequently

Reference

[1]Madden C, Vaughn MD, Díez-Pérez I, Brown KA, King PW, Gust D, Moore AL, Moore TA (January 2012). "Catalytic turnover of [FeFe]-hydrogenase based on single-molecule imaging". Journal of the American Chemical Society. 134 (3): 1577–82. doi:10.1021/ja207461t. PMID 21916466.

[2] Smith PR, Bingham AS, Swartz JR (2012). "Generation of hydrogen from NADPH using an [FeFe] hydrogenase". Int. J. Hydrogen Energy. 37: 2977–2983.

[3] Madden C, Vaughn MD, Díez-Pérez I, Brown KA, King PW, Gust D, Moore AL, Moore TA (January 2012). "Catalytic turnover of [FeFe]-hydrogenase based on single-molecule imaging". Journal of the American Chemical Society. 134 (3): 1577–82. doi:10.1021/ja207461t. PMID 21916466.]

[4] Honda, Y., Hagiwara, H., Ida, S., & Ishihara, T. (2016). Application to photocatalytic h 2, production of a whole-cell reaction by recombinant escherichia coli, cells expressing [fefe]-hydrogenase and maturases genes. Angewandte Chemie.

[5] Bieniossek, C., Nie, Y., Frey, D., Olieric, N., Schaffitzel, C., & Collinson, I., et al. (2009). Automated unrestricted multigene recombineering for multiprotein complex production. Nature Methods, 6(6), 447-450.

[6] King, P. W., Posewitz, M. C., Ghirardi, M. L., & Seibert, M. (2006). Functional studies of [fefe] hydrogenase maturation in an escherichia coli biosynthetic system. Journal of Bacteriology, 188(6), 2163-72.

[7] Cao Y, Bai X F. Progress in Research of Preparation of Loaded Nano-CdS and H_2 Production by Photocatalytic Decomposition of Water[J]. Imaging Science & Photochemistry, 2009, 27(3):225-232.

[8] Honda Y, Hagiwara H, Ida S, et al. Application to Photocatalytic H 2, Production of a Whole-Cell Reaction by Recombinant Escherichia coli, Cells Expressing [FeFe]-Hydrogenase and Maturases Genes[J]. Angewandte Chemie, 2016