Difference between revisions of "Team:NYU-AD/Description"

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<h3>★  ALERT! </h3>
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<h2>Project Description</h2>
<p>This page is used by the judges to evaluate your team for the<a href="https://2016.igem.org/Judging/Medals"> improve a previous part or project gold medal criterion</a>. </p>
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<h3>Issue</h3>
<p> Delete this box in order to be evaluated for this medal. See more information at <a href="https://2016.igem.org/Judging/Pages_for_Awards/Instructions"> Instructions for Pages for awards</a>.</p>
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<p>In many developing countries, rapid urbanization leaves people with limited access to cooking facilities, resulting in a large dependence on reasonably priced and conveniently available street foods. These foods, however, pose a high risk of food poisoning due to microbial contamination. According to WHO statistics, food poisoning kills 420,000 people a year worldwide. One of the primary microbial contaminants is the Shiga toxin-producing E. coli O157:H7 (STEC). These particular pathogenic bacteria cause severe diseases in humans worldwide by secreting a toxin called Shiga-like toxin (SLT). Research shows that E. coli causes 73,000 illnesses in the United States every year. It is even estimated that STEC causes 2,801,000 acute illnesses worldwide annually, leading to 3890 cases of Hemolytic Uremic Syndrome, 270 cases of End-stage renal disease, and 230 deaths. Currently, there is no detection method for Shiga-like toxin outside of a lab setting, so consumers have no way of protecting themselves without strong legislation.</p>
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<h3>Project</h3>
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<p>Lack of action taken by governments and street food vendors in developing countries lead to the prevalence of street food-related illnesses, and call for the necessity of consumer awareness. Our project ultimately aims for a consumer-focused mechanism to detect Shiga-like toxins in foods.</p>
  
<p>Tell us about your project, describe what moves you and why this is something important for your team.</p>
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<p>Shiga-like toxins are exotoxins, which consist of a toxic enzymatic A subunit and a cell-binding B subunit. The latter binds to a globotriaosylceramide (Gb3) receptor, expressed on the surface of the target cells. This interaction is responsible for the toxin's entry into the host cell. Through our device, Gb3 will be expressed in non-pathogenic E. coli. When the receptor is exposed to the food sample, the SLT subunit B, if present, will bind to Gb3. Crosslinking will occur to stabilize the interaction. Next, a recombinant subunit B will be fused with a reporter and then applied to detect whether the Gb3 binding sites are available. If the binding sites are vacant, the sub-unit B will bind to them and elicit a signal, indicating the safety of the food sample.</p>
  
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<p>In summary, we will be creating a portable device that would evaluate the safety of food by detecting a specific contaminant, Shiga-like toxin, for consumers who rely heavily on street food in developing countries in which there are weak food safety regulations.</p>
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<br>
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<h3>Ideation Process</h3>
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<p>Before making our final decision, we explored an extremely diverse range of project topics such as blockage of oil pipes, controlling fruit ripening, detecting milk adulteration, biodegradable plastics, bioelectronics, preventing the coral reefs bleaching, bio-art, smoking, monitoring air quality, and more. After extensive research and intense discussion, we decided to move forward with the idea of detecting pathogenic SLT-producing E. coli in street foods. SLT is highly toxic due to its low LD50 and the A subunit’s protein synthesis inhibitory action, so it would have been too dangerous to work with given our lab environments. Keeping the validation process in mind, we decided to use only the SLT B subunit as our method of verification.</p>
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<p>Hello world <br> Hell oworld <br>hello world<br>hellow
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<p>
  
<h5>What should this page contain?</h5>
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<h3>References</h3>
<ul>
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<ol>
<li> A clear and concise description of your project.</li>
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<li> the first reference</li>
<li>A detailed explanation of why your team chose to work on this particular project.</li>
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<li> the first reference</li>
<li>References and sources to document your research.</li>
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</ol>
<li>Use illustrations and other visual resources to explain your project.</li>
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<h5>Advice on writing your Project Description</h5>
 
  
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We encourage you to put up a lot of information and content on your wiki, but we also encourage you to include summaries as much as possible. If you think of the sections in your project description as the sections in a publication, you should try to be consist, accurate and unambiguous in your achievements.
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Judges like to read your wiki and know exactly what you have achieved. This is how you should think about these sections; from the point of view of the judge evaluating you at the end of the year.
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NYUAD<i class="fa fa-heart"></i>
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<h5>References</h5>
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<p>iGEM teams are encouraged to record references you use during the course of your research. They should be posted somewhere on your wiki so that judges and other visitors can see how you thought about your project and what works inspired you.</p>
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<h5>Inspiration</h5>
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<p>See how other teams have described and presented their projects: </p>
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<li><a href="https://2014.igem.org/Team:Imperial/Project"> Imperial</a></li>
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<li><a href="https://2014.igem.org/Team:UC_Davis/Project_Overview"> UC Davis</a></li>
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<li><a href="https://2014.igem.org/Team:SYSU-Software/Overview">SYSU Software</a></li>
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Revision as of 20:17, 5 October 2016

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Project Description

Issue

In many developing countries, rapid urbanization leaves people with limited access to cooking facilities, resulting in a large dependence on reasonably priced and conveniently available street foods. These foods, however, pose a high risk of food poisoning due to microbial contamination. According to WHO statistics, food poisoning kills 420,000 people a year worldwide. One of the primary microbial contaminants is the Shiga toxin-producing E. coli O157:H7 (STEC). These particular pathogenic bacteria cause severe diseases in humans worldwide by secreting a toxin called Shiga-like toxin (SLT). Research shows that E. coli causes 73,000 illnesses in the United States every year. It is even estimated that STEC causes 2,801,000 acute illnesses worldwide annually, leading to 3890 cases of Hemolytic Uremic Syndrome, 270 cases of End-stage renal disease, and 230 deaths. Currently, there is no detection method for Shiga-like toxin outside of a lab setting, so consumers have no way of protecting themselves without strong legislation.


Project

Lack of action taken by governments and street food vendors in developing countries lead to the prevalence of street food-related illnesses, and call for the necessity of consumer awareness. Our project ultimately aims for a consumer-focused mechanism to detect Shiga-like toxins in foods.

Shiga-like toxins are exotoxins, which consist of a toxic enzymatic A subunit and a cell-binding B subunit. The latter binds to a globotriaosylceramide (Gb3) receptor, expressed on the surface of the target cells. This interaction is responsible for the toxin's entry into the host cell. Through our device, Gb3 will be expressed in non-pathogenic E. coli. When the receptor is exposed to the food sample, the SLT subunit B, if present, will bind to Gb3. Crosslinking will occur to stabilize the interaction. Next, a recombinant subunit B will be fused with a reporter and then applied to detect whether the Gb3 binding sites are available. If the binding sites are vacant, the sub-unit B will bind to them and elicit a signal, indicating the safety of the food sample.

In summary, we will be creating a portable device that would evaluate the safety of food by detecting a specific contaminant, Shiga-like toxin, for consumers who rely heavily on street food in developing countries in which there are weak food safety regulations.


Ideation Process

Before making our final decision, we explored an extremely diverse range of project topics such as blockage of oil pipes, controlling fruit ripening, detecting milk adulteration, biodegradable plastics, bioelectronics, preventing the coral reefs bleaching, bio-art, smoking, monitoring air quality, and more. After extensive research and intense discussion, we decided to move forward with the idea of detecting pathogenic SLT-producing E. coli in street foods. SLT is highly toxic due to its low LD50 and the A subunit’s protein synthesis inhibitory action, so it would have been too dangerous to work with given our lab environments. Keeping the validation process in mind, we decided to use only the SLT B subunit as our method of verification.

Hello world
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hellow Hello world
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References

  1. the first reference
  2. the first reference

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