Difference between revisions of "Team:Tongji Shanghai/Parts"

 
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      <div class="container">
 
        <div class="row">
 
          <div class="col-md-6">
 
            <h2>Achievment</h2>
 
            <p>Why we deserve a medal.</p>
 
          </div>
 
          <div class="col-md-6">
 
            <ul class="breadcrumbs">
 
              <li><a href="#">Home</a></li>
 
              <li>Achievement</li>
 
            </ul>
 
          </div>
 
        </div>
 
      </div>
 
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             <div class="widget widget-categories" style="display: block;position: fixed;" id="sidebar1">
 
               <h4>Parts<span class="head-line"></span></h4>
 
               <h4>Parts<span class="head-line"></span></h4>
 
               <ul>
 
               <ul>
 
                 <li>
 
                 <li>
 
                   <a href="#">Favorite Parts</a>
 
                   <a href="#">Favorite Parts</a>
 +
                </li>
 +
                <li>
 +
                  <a href="#">Parts List</a>
 
                 </li>
 
                 </li>
 
                 <li>
 
                 <li>
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     <div class="col-md-9">  
 
     <div class="col-md-9">  
            <!-- Fudan ~ Tongji -->
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       <div class="row">     
 
       <div class="row">     
 
       <div class="col-md-12" style="margin:0px; padding:0">
 
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            <ul style="margin-left:0px; font-size:16px;">Team Fudan need tet-on or tet-of promoter to get tetO element and miniCMV as the promoter to drive their genes of interest. Vice professor Wenwen Jia in our school works on apparent heredity field, happens to have tet-on kit for his work. We made contact with Pro. Wenwen Jia and gained 3μl. <br><br>
+
          <h4>BBa_K1922006<span class="head-line"></span></h4><br>       
            We also asked him for the associating kit that responses to panmycin and send the signal to promoter. Team Fudan used these two kits to PCR and continued their experiments. At the same time, Team Fudan had provided great help either. They built their kit ahead of us, and they generously provided almost all of the materials that we gonna need for kit submitting.(15 ml of chloromycetin powder,8 chloramphenicol resistance plates,80ml chloramphenicol resistance LB,Enzyme of XbaI and SpeI each 3μl)  </ul>
+
          <ul style="margin-left:0px; font-size:16px;">We have chosen hTert-p53 as our favorite part because it can help solve the off-target effect of traditional photothermal therapy. We tend to describe the part as a gunsight. HTert is human telomerase reverse transcriptase, which is constitutively activated only in immortalized cells including tumor cells. <br>P35 is a tumor suppressor which can increase the thermosensitivity of cancer cells. Theoretically, combined with hTert promoter, p53 will be overexpressed in tumor cells specifically, so the thermosensitivity of tumor cells would be increased rather than of normal cells. After equipping our gun with such a gunsight, the accuracy rate will increase. Namely, majority of our enemies, the tumor cells will be ablated while the innocent citizens, the normal cells can stay safe and sound with rational gold nanorods concentration and light intensity. In addition, the part can become a gun itself because it will induce apoptosis of cancer cells specifically. Cooperated with this part, photothermal therapy will achieve an astonishing result which demonstrates that one plus one is greater than two.</ul>
 +
         
 +
         
 +
          <img alt="" src="https://static.igem.org/mediawiki/2016/1/1f/T--Tongji_Shanghai--Parts_1.jpg" style="max-height:500px;margin-top:10px;"></ul>
 
           <br>
 
           <br>
 
           </div>       
 
           </div>       
 
             </div>  
 
             </div>  
      
+
           
 +
 
 +
      <div class="col-md-12" style="margin:0px; padding:0">
 +
        <div class="row">
 +
      <h3 class="classic-title" style="margin-top:0px"><span>Parts List</span></h3>   
 +
           
 +
            <table class="table table-hover table-striped" style="color:#666;font-size:14px">
 +
                <thead>
 +
                <tr>
 +
                <th>Favorite</th>
 +
                <th>Name</th>
 +
                <th>Type</th>
 +
                <th>Description</th>
 +
                <th>Length</th>
 +
                </tr>
 +
                </thead>
 +
 
 +
                <tbody>
 +
                <tr>
 +
                  <td>&nbsp;√</td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922006" style="color:#00afd1">BBa_K1922006</a></td>
 +
                <td>Composite</td>
 +
                <td>hTert-p53</td>
 +
                <td>1953</td>
 +
                </tr>
 +
 
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922007" style="color:#00afd1">BBa_K1922007</a></td>
 +
                <td>Composite</td>
 +
                <td>hsp70-p53</td>
 +
                <td>1667</td>
 +
                </tr>
 +
 
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922012" style="color:#00afd1">BBa_K1922012</a></td>
 +
                <td>Composite</td>
 +
                <td>hsp70-p53-luciferase</td>
 +
                <td>2666</td>
 +
                </tr>
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922009" style="color:#00afd1">BBa_K1922009</a></td>
 +
                <td>Composite</td>
 +
                <td>hTert-GFP</td>
 +
                <td>1488</td>
 +
                </tr>                   
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922001" style="color:#00afd1">BBa_K1922001</a></td>
 +
                <td>regulatory</td>
 +
                <td>hTert promoter</td>
 +
                <td>765</td>
 +
                </tr> 
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922004" style="color:#00afd1">BBa_K1922004</a></td>
 +
                <td>regulatory</td>
 +
                <td>(hsp70 promoter) pro-moter</td>
 +
                <td>477</td>
 +
                </tr>                   
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922008" style="color:#00afd1">BBa_K1922008</a></td>
 +
                <td>reporter</td>
 +
                <td>Green fluorescent protein</td>
 +
                <td>717</td>
 +
                </tr>                     
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922010" style="color:#00afd1">BBa_K1922010</a></td>
 +
                <td>reporter</td>
 +
                <td>Green fluorescent protein</td>
 +
                <td>993</td>
 +
                </tr>      
 +
                   
 +
                <tr>
 +
                  <td></td>
 +
                <td><a href="http://parts.igem.org/wiki/index.php?title=Part:BBa_K1922003" style="color:#00afd1">BBa_K1922003</a></td>
 +
                <td>coding</td>
 +
                <td>coding for tumor supressor, wild type p53</td>
 +
                <td>993</td>
 +
                </tr>                     
 +
                </tbody>
 +
                </table>
 +
    </div>     
 +
    </div>
 +
 +
                       
 +
 
 +
               
 
     <!-- Basic Parts-->  
 
     <!-- Basic Parts-->  
 
       <div class="row">     
 
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           <!-- Some Text -->
 
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           <h4>BBa_K1922001<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922001<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">Approximately 80% of cancers are immortalized by constitutive activa-tion of telomerase to maintain telomeres throughout rapid cellular prolif-eration. HTert promoter is the promoter we cloned from human cell, which can drive the transcription of  telomerase in human. We hoped that it can promote the transcription of the certain gene following it in tumor cells specifically, instead of in normal cells. </ul>
+
           <ul style="margin-left:0px; font-size:16px;">Approximately 80% of cancers are immortalized by constitutive activation of telomerase to maintain telomeres throughout rapid cellular proliferation. HTert promoter is the promoter we cloned from human cell, which can drive the transcription of  telomerase in human. We hoped that it can promote the transcription of the certain gene following it in tumor cells specifically, instead of in normal cells. </ul>
 
          
 
          
 
           <br>
 
           <br>
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           <h4>BBa_K1922003<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922003<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">The cells of all tissues react to various stresses through the quick synthesization of HSPs.As the most important HSPs family. HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain tem-perature. From the literature we finally set the preform condition as 42C for 1h </ul>           
+
           <ul style="margin-left:0px; font-size:16px;">The cells of all tissues react to various stresses through the quick synthesization of HSPs. As the most important HSPs family, HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain temperature. From the literature we finally set the preform condition as 42℃ for 1h </ul>           
 
            
 
            
 
            
 
            
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           <h4>BBa_K1922004<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922004<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">The cells of all tissues react to various stresses through the quick synthesization of HSPs.As the most important HSPs family. HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain tem-perature. From the literature we finally set the preform condition as 42C for 1h </ul>   
+
           <ul style="margin-left:0px; font-size:16px;">The cells of all tissues react to various stresses through the quick synthesization of HSPs.As the most important HSPs family. HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain tem-perature. From the literature we finally set the preform condition as 42℃ for 1h </ul>   
 
            
 
            
 
           <br>
 
           <br>
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           <h4>BBa_K1922008<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922008<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">To test if it works, we also constructed a plasmid linking a GFP as a re-porter gene linked with it. So when we transfected  it into cancer cells like hcc 1937 or hell, and telomerase negative cells, we could observe GFP fluorescent in cancer cells instead  of normal cells. </ul>  
+
           <ul style="margin-left:0px; font-size:16px;">To test if it works, we also constructed a plasmid linking a GFP as a reporter gene linked with it. So when we transfected  it into cancer cells like hcc 1937 or hela, and telomerase negative cells, we could observe GFP fluorescent in cancer cells instead  of normal cells. </ul>  
 
            
 
            
 
           <br>
 
           <br>
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           <h4>BBa_K1922010<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922010<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">We hope we can optimize the conventional theotherapy into a responsive system, which means if the laser is working, we want to know it. It will be more convenient and efficient for researchers to set appropriate condi-tion of  the equipment, such as the power of laser. So a gene of luciferase was linked after p53 as a reporter. </ul>  
+
           <ul style="margin-left:0px; font-size:16px;">We hope we can optimize the conventional theotherapy into a responsive system, which means if the laser is working, we want to know it. It will be more convenient and efficient for researchers to set appropriate condition of  the equipment, such as the power of laser. So a gene of luciferase was linked after p53 as a reporter. </ul>  
 
          
 
          
 
           </div>     
 
           </div>     
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           <h4>BBa_K1922006<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922006<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">With the combination of hTert promoter and p53, if we deliver the plasmid into mouse by virus packaging, p53 will be overexpressed in tumor cells specifically, so the thermosensitivity of tumor cells would be increased rather than of normal cells. When tumor is treated by laser with certain-length wave, with the heat induced by our golden nano rods(GNRs), the apoptosis of tumor cells whose thermosensitivity has been increased would start more efficiently. Thus, because of the tumor-targeted hTert promoter and the tumor suppressor following it, we improved the targeting of conventional thermotherapy. </ul>  
+
           <ul style="margin-left:0px; font-size:16px;">With the combination of hTert promoter and p53, if we deliver the plasmid into mouse by virus packaging, p53 will be overexpressed in tumor cells specifically, so the thermosensitivity of tumor cells would be increased rather than of normal cells. When tumor is treated by laser with certain-length wave, with the heat induced by our golden nano rods(GNRs), the apoptosis of tumor cells whose thermosensitivity has been increased would start more efficiently. Thus, because of the tumor-targeted hTert promoter and the tumor suppressor following it, we improved the targeting of conventional thermotherapy. </ul>
 +
         
 +
         
 +
          <img alt="" src="https://static.igem.org/mediawiki/2016/1/1f/T--Tongji_Shanghai--Parts_1.jpg" style="max-height:500px;margin-top:10px;">
 
            
 
            
 
           <br>
 
           <br>
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           <h4>BBa_K1922007<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922007<span class="head-line"></span></h4><br>
 
           <ul style="margin-left:0px; font-size:16px;">As we mentioned above, heat shock protein 70(hsp
 
           <ul style="margin-left:0px; font-size:16px;">As we mentioned above, heat shock protein 70(hsp
               70) will be synthesized rapidly after heat shock. While convention-al thermotherapy has already got great efficiency in clinical appli-cation, we wondered if we can make the whole system responsive, which means there can be a reporter system telling people that the heat treatment of laser is working. Hsp70 promoter can drive the transcription of p53 gene after heat shock which is done by laser and GNRs in thermotherapy. </ul>  
+
               70) will be synthesized rapidly after heat shock. While convention-al thermotherapy has already got great efficiency in clinical application, we wondered if we can make the whole system responsive, which means there can be a reporter system telling people that the heat treatment of laser is working. Hsp70 promoter can drive the transcription of p53 gene after heat shock which is done by laser and GNRs in thermotherapy. </ul>  
 
            
 
            
 
           <br>
 
           <br>
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           <h4>BBa_K1922009<span class="head-line"></span></h4><br>
 
           <h4>BBa_K1922009<span class="head-line"></span></h4><br>
           <ul style="margin-left:0px; font-size:16px;">GFP gene was linked after hTert promoter,after transfecting it into different cell lines, we can examine if the promoter can drive the transcription of the gene after it in hTert positive cells but not nega-tive ones. </ul>
+
           <ul style="margin-left:0px; font-size:16px;">GFP gene was linked after hTert promoter,after transfecting it into different cell lines, we can examine if the promoter can drive the transcription of the gene after it in hTert positive cells but not negative ones. </ul>
 
            
 
            
 +
          <img alt="" src="https://static.igem.org/mediawiki/2016/c/c9/T--Tongji_Shanghai--HomePage_parts_2.jpg" style="max-height:500px;margin-top:10px;">
 +
         
 +
       
 
           <br>
 
           <br>
 
           <div class="hr5" style="margin-top:5px; margin-bottom:0px;"></div>
 
           <div class="hr5" style="margin-top:5px; margin-bottom:0px;"></div>
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           <ul style="margin-left:0px; font-size:16px;">After inserting the hsp70-p53 fraction into pGL3 vector which con-tains a luciferase gene, we could observe if the tumor cells had been heat treated in in vivo bioluminescence imaging machine with the injection of luciferase substance. If the result can be re-flected from mouse direcly, it will be easier to set experimental condition and save the use of model animals. At the same time, p53 can work to increase the thermosesitivity of tumor cells. We hope hsp70-p53-luciferase can be a novel reporter system to make conventional thermotherapy a responsive method for us to treat cancer in a more efficient way. </ul>
 
           <ul style="margin-left:0px; font-size:16px;">After inserting the hsp70-p53 fraction into pGL3 vector which con-tains a luciferase gene, we could observe if the tumor cells had been heat treated in in vivo bioluminescence imaging machine with the injection of luciferase substance. If the result can be re-flected from mouse direcly, it will be easier to set experimental condition and save the use of model animals. At the same time, p53 can work to increase the thermosesitivity of tumor cells. We hope hsp70-p53-luciferase can be a novel reporter system to make conventional thermotherapy a responsive method for us to treat cancer in a more efficient way. </ul>
 
            
 
            
          
+
         <img alt="" src="https://static.igem.org/mediawiki/2016/6/64/T--Tongji_Shanghai--Parts.jpg" style="max-height:500px;margin-top:10px;">
 
          
 
          
 
         </div>       
 
         </div>       

Latest revision as of 01:52, 20 October 2016

Tongji_Shanghai-2016.igem.org Tongji Shanghai

Margo | Blog

Achievment

Why we deserve a medal.

Favorite Parts

BBa_K1922006


    We have chosen hTert-p53 as our favorite part because it can help solve the off-target effect of traditional photothermal therapy. We tend to describe the part as a gunsight. HTert is human telomerase reverse transcriptase, which is constitutively activated only in immortalized cells including tumor cells.
    P35 is a tumor suppressor which can increase the thermosensitivity of cancer cells. Theoretically, combined with hTert promoter, p53 will be overexpressed in tumor cells specifically, so the thermosensitivity of tumor cells would be increased rather than of normal cells. After equipping our gun with such a gunsight, the accuracy rate will increase. Namely, majority of our enemies, the tumor cells will be ablated while the innocent citizens, the normal cells can stay safe and sound with rational gold nanorods concentration and light intensity. In addition, the part can become a gun itself because it will induce apoptosis of cancer cells specifically. Cooperated with this part, photothermal therapy will achieve an astonishing result which demonstrates that one plus one is greater than two.

Parts List

Favorite Name Type Description Length
 √ BBa_K1922006 Composite hTert-p53 1953
BBa_K1922007 Composite hsp70-p53 1667
BBa_K1922012 Composite hsp70-p53-luciferase 2666
BBa_K1922009 Composite hTert-GFP 1488
BBa_K1922001 regulatory hTert promoter 765
BBa_K1922004 regulatory (hsp70 promoter) pro-moter 477
BBa_K1922008 reporter Green fluorescent protein 717
BBa_K1922010 reporter Green fluorescent protein 993
BBa_K1922003 coding coding for tumor supressor, wild type p53 993

Basic Parts

BBa_K1922001


    Approximately 80% of cancers are immortalized by constitutive activation of telomerase to maintain telomeres throughout rapid cellular proliferation. HTert promoter is the promoter we cloned from human cell, which can drive the transcription of telomerase in human. We hoped that it can promote the transcription of the certain gene following it in tumor cells specifically, instead of in normal cells.


BBa_K1922003


    The cells of all tissues react to various stresses through the quick synthesization of HSPs. As the most important HSPs family, HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain temperature. From the literature we finally set the preform condition as 42℃ for 1h


BBa_K1922004


    The cells of all tissues react to various stresses through the quick synthesization of HSPs.As the most important HSPs family. HSP70 has the highest temperature sensitivity and conservation. Having synthesized human hsp70 promoter, we hope it can drive the transcription of selected gene after heat shock at certain tem-perature. From the literature we finally set the preform condition as 42℃ for 1h


BBa_K1922008


    To test if it works, we also constructed a plasmid linking a GFP as a reporter gene linked with it. So when we transfected it into cancer cells like hcc 1937 or hela, and telomerase negative cells, we could observe GFP fluorescent in cancer cells instead of normal cells.


BBa_K1922010


    We hope we can optimize the conventional theotherapy into a responsive system, which means if the laser is working, we want to know it. It will be more convenient and efficient for researchers to set appropriate condition of the equipment, such as the power of laser. So a gene of luciferase was linked after p53 as a reporter.

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BBa_K1922006


    With the combination of hTert promoter and p53, if we deliver the plasmid into mouse by virus packaging, p53 will be overexpressed in tumor cells specifically, so the thermosensitivity of tumor cells would be increased rather than of normal cells. When tumor is treated by laser with certain-length wave, with the heat induced by our golden nano rods(GNRs), the apoptosis of tumor cells whose thermosensitivity has been increased would start more efficiently. Thus, because of the tumor-targeted hTert promoter and the tumor suppressor following it, we improved the targeting of conventional thermotherapy.


BBa_K1922007


    As we mentioned above, heat shock protein 70(hsp 70) will be synthesized rapidly after heat shock. While convention-al thermotherapy has already got great efficiency in clinical application, we wondered if we can make the whole system responsive, which means there can be a reporter system telling people that the heat treatment of laser is working. Hsp70 promoter can drive the transcription of p53 gene after heat shock which is done by laser and GNRs in thermotherapy.


BBa_K1922009


    GFP gene was linked after hTert promoter,after transfecting it into different cell lines, we can examine if the promoter can drive the transcription of the gene after it in hTert positive cells but not negative ones.


BBa_K1922012


    After inserting the hsp70-p53 fraction into pGL3 vector which con-tains a luciferase gene, we could observe if the tumor cells had been heat treated in in vivo bioluminescence imaging machine with the injection of luciferase substance. If the result can be re-flected from mouse direcly, it will be easier to set experimental condition and save the use of model animals. At the same time, p53 can work to increase the thermosesitivity of tumor cells. We hope hsp70-p53-luciferase can be a novel reporter system to make conventional thermotherapy a responsive method for us to treat cancer in a more efficient way.

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