Difference between revisions of "Team:Tianjin/Note/6803"

 
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        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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<div id="Week1"></div>       
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<article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
 
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<div class="entry-title" align="center" ><a href="https://www.camarts.cn/archives/4252.html" title="查看《火影忍者疾风传》中的全部作品" rel="bookmark">Notes</a></div>
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<div class="entry-title" align="center" >Notes For Cyanobacteria</div>
 
</header><!-- .entry-header -->
 
</header><!-- .entry-header -->
        <div class="attribution">Week1(8/1/2016-8/7/2016)</div>
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<article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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<header class="entry-header">
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<h1 class="entry-title">Week1(7/31/2016-8/6/2016)</h1>
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  <li><b><i>After severals weeks of brainstorming and team meetings, we decided to focus on the implementation of cell-free biosensors. </i></b></li>
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    <li>Cultivation: 30µLmother liquid of Synechococcus sp PCC 7942 (wild type)were cultivated in 10 mL BG-11-media at 30°C and 140rpm.<br/></li>
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<b><h1 style="font-size:108%">&nbsp;&nbsp;Jul.31th</b></h1>
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<div style="padding-left:32px;"><li>Cultivation: 30µL mother liquid of Synechococcus sp PCC 7942 (wild type)were cultivated in 10 mL BG-11-media at 30°C and 140rpm.</li>
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<li>The genome DNA of 7942 was extracted using a Genomic DNA Isolation Kit.</li></div><br/>
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<a class="expand-btn2">Show More</a>
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<a href="https://www.camarts.cn/archives/4252.html">
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<!------------------------------------week2 start------------------------------------------------>      
<img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/igem.org/e/ec/T--Tianjin--cjw.jpg"  alt="IMG_2956" width="800" height="533"
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<a href="https://www.camarts.cn/archives/4252.html">
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<article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
<img class="aligncenter size-full wp-image-4256" src="https://static.igem.org/mediawiki/igem.org/e/ec/T--Tianjin--cjw.jpg"  alt="IMG_2956" width="800" height="533"  
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<h1 class="entry-title">Week2(8/14/2016-8/20/2016)</h1>
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<div class="entry-content">
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<div class="note-content4">
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<div style="padding-left:32px;"><li>Synechococcus sp PCC 7942 had no signals of life.</li></div><br/>
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<a href="https://static.igem.org/mediawiki/2016/3/37/Igem--6803-week2.jpg" data-lightbox="no" data-title="7942">
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<img align="center" src="https://static.igem.org/mediawiki/2016/3/37/Igem--6803-week2.jpg"  alt="Igem-6803-week2" width="300px"><br/><br/>
 
</a>
 
</a>
<p> <a href="https://www.camarts.cn/archives/4252.html" class="more-link">查看Team Tianjin全部实验 <span class="meta-nav">&rsaquo;</span></a></p>
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<br/>  
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<div id="Week3"></div>
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<footer class="entry-meta">
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<span class="sep">发表于 </span>2016 年 1 月 28 日<span class="sep"> | </span>
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<span class="cat-links">
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<span id="March" class="entry-utility-prep entry-utility-prep-cat-links">发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">春野樱</a> </span>
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<span class="sep"> | </span>
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<span class="tag-links">
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">漩涡鸣人</a> </span>
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<span class="sep"> | </span>
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<span class="total-pictures"><a href="https://www.camarts.cn/archives/4252.html">5 张图片</a></span>
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        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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<!------------------------------------week2 end------------------------------------------------>
<div class="attribution">General support</div>
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<div class="entry-content">
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<p>After severals weeks of brainstorming and team meetings, we decided to focus on the implementation of cell-free biosensors. As there was no local expertise in working with cell-free systems, we had to read a lot of literature and developed the cell-free biosensors on our own. All work described in the wiki, including project identification, lab work, securing sponsorships, writing about our topic on the wiki and human practices work, were done by ourselves unless otherwise stated. We discussed our topic with several experts and lecturers. Without the support of the people named below, we would not have come so far in our project. These are the people we want to express our gratitude to.<br />
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<!------------------------------------week3 start------------------------------------------------>       
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        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
 +
<header class="entry-header">
 +
<h1 class="entry-title">Week3(8/28/2016-9/3/2016)</h1>
 +
</header><!-- .entry-header -->
  
 
<div class="entry-content">
 
<div class="entry-content">
          <div class="note-content">
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<div class="note-content4">
<p>火影忍者十分钟疾风传。了解其中最佳CP<a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" title="查看所有与鸣樱相关的照片">鸣樱</a>从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br />从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br />从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br />从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br /></p>
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<a href="https://www.camarts.cn/archives/4252.html"><img class="aligncenter size-full wp-image-4256" src="http://static.camarts.cn/images/spinner-1600.gif"  alt="IMG_2956" width="800" height="533" srcset="images/img_1.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4256" src="http://img.camarts.cn/2016/01/IMG_2956.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2956" width="800" height="533" srcset="http://img.camarts.cn/2016/01/IMG_2956.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
+
 
<p> <a href="https://www.camarts.cn/archives/4252.html" class="more-link">查看Team Tianjin全部实验 <span class="meta-nav">&rsaquo;</span></a></p>
+
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Aug.29th</b></h1>
 +
<div style="padding-left:32px;"><li>pMV-G19 and pMV-G15  containing our target genes were received.</li><br/>
 +
 
 +
<a href="https://static.igem.org/mediawiki/2016/6/6d/Igem-6803-week3-1.jpg" data-lightbox="no" data-title="pMV-G19 and pMV-G15">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/6/6d/Igem-6803-week3-1.jpg"  alt="Igem-6803-week3-1" width="300px" ><br/><br/>
 +
</a>
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<br/>
 +
<li>Colonies were used to inoculate overnight cultures.</li>
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</div>
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<br/>
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 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Aug.30th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids were isolated using a miniprep kit.</li>
 +
<li>Amplification of <i>19</i> and <i>15</i> with Q5 High-Fidelity DNA Polymerase out of E.coli.</li>
 +
&nbsp;&nbsp;<i>19</i> amplification at 65.0°C with 19.rev/fwd primes.<br/>
 +
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;PCR worked, positive control worked, no amplification of <i>19</i>.<br/>
 +
&nbsp;&nbsp;<i>15</i> amplification at 65.0°C with 15.rev/fwd primes.<br/>
 +
&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;PCR worked, positive control worked, no amplification of <i>15</i>.<br/>
 +
<li>A product length of 900 bp was expected. The gel shows that most plasmids seem to be correct.</li>
 +
&nbsp;&nbsp;This result was confirmed by sequencing.<br/>
 +
<li>The fragments of <i>19</i> and <i>15</i> were purified with PCR Purification Kit.</li>
 +
</div>
 +
<br/>
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 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Aug.31th</b></h1>
 +
<div style="padding-left:32px;"><li>Ligation of <i>15</i> with <i>19</i>.</li>
 +
<li>We add a single 3`-adenine overhang to each end of the fragment of <i>19</i> and then purified with DNA Purification Kit.</li>
 +
<li><i>19</i> was ligated into T vectors via TA clone and transformed into E.coli via heat shock.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.1th</b></h1>
 +
<div style="padding-left:32px;"><li>A colony PCR was performed with five colonies.</li>
 +
<li>Gel electrophoresis showed that 5 colonies were positive for insertion of <i>19</i>.</li>
 +
<li>Two of these colonies containing <i>19</i> were used to inoculate overnight cultures.</li>
 +
<li><i>15</i> gene fragment was phosphorylated.</li>
 +
</div>
 +
<br/>
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.2th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids containing T vector with <i>19</i>(pT-19)were isolated using a miniprep kit.</li>
 +
<li>Mono-restriction digest of pT-19 with stu I. </li>
 +
<li>The enzyme-digested product was dephosphorylation.</li>
 +
<br/>
 +
 
 +
<a href="https://static.igem.org/mediawiki/2016/a/aa/Igem-6803-week3.png" data-lightbox="no" data-title=" ">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/a/aa/Igem-6803-week3.png" alt="Igem-6803-week3-2" width="800" height="533"><br/>
 +
</a>
 +
<br/>
 +
 
 +
<li>Dephosphorylated plasmid and phosphorylated gene <i>15</i> were connected.</li>
 +
<li>Ligation product was transformed into E.coli via heat shock.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.3th</b></h1>
 +
<div style="padding-left:32px;"><li>A colony PCR was performed with twelve colonies.</li>
 +
<li>Gel electrophoresis showed that 2 colonies were positive for connecting the plasmid and gene fragment.</li>
 +
<li>These two colonies were used to inoculate overnight cultures.</li>
 +
</div>
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<br/>
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</div>
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<div id="Week4"></div>
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<a class="expand-btn4">Show More</a>
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</div><!-- .entry-content -->
 
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<footer class="entry-meta">
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<span class="sep">发表于 </span>2016 年 1 月 28 日<span class="sep"> | </span>
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<span class="cat-links">
+
<span class="entry-utility-prep entry-utility-prep-cat-links">发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">春野樱</a> </span>
+
<span class="sep"> | </span>
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<span class="tag-links">
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">漩涡鸣人</a> </span>
+
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<span class="sep"> | </span>
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<span class="total-pictures"><a href="https://www.camarts.cn/archives/4252.html">5 张图片</a></span>
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<hr class="article">
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    </article>
    </article><!-- #post-4252 -->
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<!------------------------------------week3 end------------------------------------------------>
        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
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<!------------------------------------week4 start------------------------------------------------>      
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        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
 
<header class="entry-header">
 
<header class="entry-header">
<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4252.html" title="查看《火影忍者疾风传》中的全部作品" rel="bookmark">火影忍者疾风传</a></h1>
+
<h1 class="entry-title">Week4(9/4/2016-9/10/2016)</h1>
 
</header><!-- .entry-header -->
 
</header><!-- .entry-header -->
  
 
<div class="entry-content">
 
<div class="entry-content">
<p>火影忍者十分钟疾风传。了解其中最佳CP<a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" title="查看所有与鸣樱相关的照片">鸣樱</a>从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br />
+
<div class="note-content4">
<a href="https://www.camarts.cn/archives/4252.html"><img class="aligncenter size-full wp-image-4256" src="http://static.camarts.cn/images/spinner-1600.gif"  alt="IMG_2956" width="800" height="533" srcset="images/img_1.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4256" src="http://img.camarts.cn/2016/01/IMG_2956.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2956" width="800" height="533" srcset="http://img.camarts.cn/2016/01/IMG_2956.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
+
<p> <a href="https://www.camarts.cn/archives/4252.html" class="more-link">查看Team Tianjin全部实验 <span class="meta-nav">&rsaquo;</span></a></p>
+
 
 +
 
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.4th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids with correct sequence of  <i>19-15</i>  were isolated using a miniprep kit.<li>
 +
<li>Mono-restriction digest of pT-19-15 with Nru I.</li>
 +
<li>The enzyme-digested product was dephosphorylation.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.6th</b></h1>
 +
<div style="padding-left:32px;"><li>Colonies containing gene <i>13</i> were used to inoculate overnight cultures.
 +
</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.7th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids were isolated using a miniprep kit.</li>
 +
<li>Amplification of <i>13</i> with Q5 High-Fidelity DNA Polymerase out of E.coli </li>
 +
<li><i>13</i> amplification at 65.0°C with 13.rev/fwd primes</li>
 +
&nbsp;&nbsp;PCR worked, positive control worked, no amplification of <i>13</i><br/>
 +
<li>The fragments of <i>13</i> were purified with PCR Purification Kit.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.8th</b></h1>
 +
<div style="padding-left:32px;"><li><i>13</i> gene fragment was phosphorylated.</li>
 +
</div>
 +
<br/>
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.9th</b></h1>
 +
<div style="padding-left:32px;"><li>Insertion of Ni promoter and ligation of <i>13-19-15</i></li>
 +
<li>Ni inducible promoter was ligated into pCPC-3301 vector.</li>
 +
<li>Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li>
 +
<li>Single colonies were obtained by plating.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.10th</b></h1>
 +
<div style="padding-left:32px;">
 +
<li>A colony PCR of Ni inducible promoter(pCPC-3301-Ni) was performed with 12 colonies.<li>
 +
&nbsp;&nbsp;Two of the successful ones were used to inoculate overnight cultures.<br/>
 +
<li>A colony PCR of pT-13-19-15 was performed with 7 colonies.<li>
 +
&nbsp;&nbsp;Two of the successful ones were used to inoculate overnight cultures.<br/>
 +
<br/>
 +
 
 +
<a href="https://static.igem.org/mediawiki/2016/8/81/Igem-6803-week4.png" data-lightbox="no" data-title=" ">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/8/81/Igem-6803-week4.png" alt="Igem-6803-week4" width="800" height="533"> <br/>
 +
</a>
 +
<br/>
 +
</div>
 +
<br/>
 +
 
 +
 
 +
</div>
 +
<div id="Week5"></div>
 +
<a class="expand-btn4">Show More</a>
 +
 
 
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<span class="sep">发表于 </span>2016 年 1 月 28 日<span class="sep"> | </span>
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<span class="entry-utility-prep entry-utility-prep-cat-links">发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">春野樱</a> </span>
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">漩涡鸣人</a> </span>
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<span class="sep"> | </span>
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<hr class="article">
+
 
    </article>
 
    </article>
  
 +
<!------------------------------------week4 end------------------------------------------------>
  
  
  
  
 +
<!------------------------------------week5 start------------------------------------------------>       
  
 +
        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
 +
<header class="entry-header">
 +
<h1 class="entry-title">Week5(9/11/2016-9/17/2016)</h1>
 +
</header><!-- .entry-header -->
  
 +
<div class="entry-content">
 +
<div class="note-content4">
  
  
Line 186: Line 376:
  
  
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.11th</b></h1>
 +
<div style="padding-left:32px;"><li>Two kinds of plasmids were isolated using a miniprep kit.
 +
</li>
 +
</div>
 +
<br/>
  
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.14th</b></h1>
 +
<div style="padding-left:32px;"><li>The sequencing results for both of them were error.</li>
 +
</div>
 +
<br/>
  
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.15th</b></h1>
 +
<div style="padding-left:32px;"><li>Colonies containing Ni inducible promoter were used to inoculate overnight cultures.</li>
 +
<li>PCR was performed to check if the gene fragments were ligated correctly.</li>
 +
&nbsp;&nbsp;13_ fwd and 15_rev on pT-13-19-15<br/>
 +
<li>Gel electrophoresis showed that it failed.</li>
 +
</div>
 +
<br/>
  
<article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
+
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.16th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids pCPC-3031-Ni were isolated using a miniprep kit.</li>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.17th</b></h1>
 +
<div style="padding-left:32px;">
 +
<li>Several PCRs were performed to check if the gene fragments were ligated correctly.</li>
 +
&nbsp;&nbsp;13_fwd and 13_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;19_fwd and 19_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;15_fwd and 15_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;13_fwd and 19_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;19_fwd and 15_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;13_ wd and 15_rev on pT-13-19-15<br/>
 +
<b>The fourth and sixth ones were not successful.</b><br/>
 +
<br/>
 +
 
 +
<a href="https://static.igem.org/mediawiki/2016/4/40/Igem-6803-week5.png" data-lightbox="no" data-title=" ">
 +
<img align="center"src="https://static.igem.org/mediawiki/2016/4/40/Igem-6803-week5.png"  alt="Igem-6803-week5" width="800" height="533" ><br/>
 +
</a>
 +
<br/>
 +
<li><b>Repetition:</b>  Phosphorylated <i>13</i> was ligated into pT-19-15 and transformed into E.coli via heat shock.</li>
 +
</div>
 +
<br/>
 +
 
 +
 
 +
 
 +
 
 +
 
 +
</div>
 +
<div id="Week6"></div>
 +
<a class="expand-btn4">Show More</a>
 +
</div><!-- .entry-content -->
 +
 
 +
 +
       
 +
 +
    </article>
 +
 
 +
<!------------------------------------week5 end------------------------------------------------>
 +
 
 +
 
 +
 
 +
<!------------------------------------week6 start------------------------------------------------>       
 +
 +
        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
 
<header class="entry-header">
 
<header class="entry-header">
<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4252.html" title="查看《火影忍者疾风传》中的全部作品" rel="bookmark">火影忍者疾风传</a></h1>
+
<h1 class="entry-title">Week6(9/18/2016-9/24/2016)</h1>
 
</header><!-- .entry-header -->
 
</header><!-- .entry-header -->
  
 
<div class="entry-content">
 
<div class="entry-content">
<p>火影忍者十分钟疾风传。了解其中最佳CP<a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" title="查看所有与鸣樱相关的照片">鸣樱</a>从小就是青梅竹马。没有月光,除了远处县城依稀的灯光和偶尔驶过的车灯外,便是一片漆黑,伸手不见五指,只能在满天繁星的映衬下依稀看见些随风而动的树影。而这,正是拍摄银河的最佳时机。<br />
+
 
<a href="https://www.camarts.cn/archives/4252.html"><img class="aligncenter size-full wp-image-4256" src="http://static.camarts.cn/images/spinner-1600.gif"  alt="IMG_2956" width="800" height="533" srcset="images/img_1.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4256" src="http://img.camarts.cn/2016/01/IMG_2956.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2956" width="800" height="533" srcset="http://img.camarts.cn/2016/01/IMG_2956.jpg 800w, http://img.camarts.cn/2016/01/IMG_2956-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2956-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2956-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2956-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
+
<div class="note-content4">
<p> <a href="https://www.camarts.cn/archives/4252.html" class="more-link">查看Team Tianjin全部实验 <span class="meta-nav">&rsaquo;</span></a></p>
+
 
 +
 
 +
 
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.18th</b></h1>
 +
<div style="padding-left:32px;"><b>Repetition:</b> Several PCRs were performed to check if the gene fragments were ligated correctly.<br/>
 +
&nbsp;&nbsp;13_fwd and 13_rev on pT-13-19-15<br/>
 +
&nbsp;&nbsp;13_fwd and 19_rev on pT-13-19-15<br/>
 +
<b>The second one was failed.</b><br/>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.21th</b></h1>
 +
<div style="padding-left:32px;"><li>Medium preparation :BG-11.</li>
 +
<li>19_ fwd and 15_rev were used to amplify <i>19-15</i>.</li>
 +
 
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.22th</b></h1>
 +
<div style="padding-left:32px;">
 +
<li>Gel electrophoresis showed that amplification of fragments was successfull.</li>
 +
<li>Ligated <i>13</i> and <i>19-15</i> via overlap PCR.</li>
 +
<li>This PCR worked well and the products were extracted from the gel using a Agarose Gel DNA Extration Kit.</li>
 +
<li>Restriction digest on pCPC-3031-Ni with Sac I.</li>
 +
<br/>
 +
<a href="https://static.igem.org/mediawiki/2016/8/89/Igem-6803-week6-2.jpg" data-lightbox="no" data-title=" ">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/8/89/Igem-6803-week6-2.jpg" alt="Igem-6803-week6-1" width="300px">
 +
</a>
 +
 
 +
<li>The fragment <i>13-19-15</i> was ligated onto T vector and transformed into E.coli via heat shock.</li>
 +
 
 +
<a href="https://static.igem.org/mediawiki/2016/0/06/Igem-6803-week6.jpg" data-lightbox="no" data-title=" ">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/0/06/Igem-6803-week6.jpg"  alt="Igem-6803-week6-2" width="300px" >
 +
</a>
 +
<br/>
 +
</div>
 +
<br/>
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.23th</b></h1>
 +
<div style="padding-left:32px;"><li>A colony PCR of pT-13-19-15 was performed with 12 colonies.</li>
 +
<li>Two of these colonies containing pT-13-19-15 were used to inoculate overnight cultures.</li>
 +
<li><i>13-19-15</i> gene fragment was phosphorylated.</li>
 +
<li>Phosphorylated <i>13-19-15</i> was ligated into pCPC-3031-Ni and transformed into E.coli via heat shock.</li>
 +
</div>
 +
<br/>
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.24th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids pT-13-19-15 were isolated using a miniprep kit.</li>
 +
</div>
 +
<br/>
 +
 
 +
</div>
 +
<div id="Week7"></div>
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<span class="sep">发表于 </span>2016 年 1 月 28 日<span class="sep"> | </span>
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<span class="entry-utility-prep entry-utility-prep-cat-links">发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">春野樱</a> </span>
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<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4235.html" title="查看《喀纳斯印象》中的全部作品" rel="bookmark">火影忍者疾风传</a></h1>
 
</header><!-- .entry-header -->
 
  
<div class="entry-content">
+
<!------------------------------------week6 end------------------------------------------------>
<p>终于来到喀纳斯——中国最西北的角落,此次西北之行可到达的最远处。在这个纬度高达 48 度的地方,山坡上的植被更加茂密;太阳下落得很慢,阳光以一个非常低的角度横扫过来,跨过群山,透过树木,在地上都投出长长的影子,非常好看。<br />
+
<a href="https://www.camarts.cn/archives/4235.html"><img class="aligncenter size-full wp-image-4239" src="http://static.camarts.cn/images/spinner-1600.gif" srcset="images/1_16.jpg 800w, images/1_16.jpg 150w, images/1_16.jpg 300w, images/1_16.jpg 768w, images/1_16.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4239" src="http://img.camarts.cn/2016/01/IMG_2889.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2889" width="800" height="533" srcset="http://img.camarts.cn/2016/01/IMG_2889.jpg 800w, http://img.camarts.cn/2016/01/IMG_2889-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2889-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2889-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2889-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
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<p> <a href="https://www.camarts.cn/archives/4235.html" class="more-link">查看本辑全部作品 <span class="meta-nav">&rsaquo;</span></a></p>
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<span class="sep">发表于 </span>2016 年 1 月 20 日<span class="sep"> | </span>
 
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%86%b2%e4%b9%8e%e5%b0%94" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">漩涡鸣人</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">火影</a> </span>
 
 
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<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4222.html" title="查看《冲乎尔牧场》中的全部作品" rel="bookmark">火影忍者十分钟疾风传</a></h1>
 
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<div class="entry-content">
 
<p>告别<a href="https://www.camarts.cn/archives/4193.html">禾木乡</a>,继续向喀纳斯方向前行,途中经过<a href="https://www.camarts.cn/archives/tag/%e5%86%b2%e4%b9%8e%e5%b0%94" title="查看所有与 冲乎尔 相关的照片">冲乎尔</a>乡。这里是一个天然牧场,坐落在小盆地,群山环抱,乡民主要以放牧为生。果然,不时就能看见牧羊人赶着几百头“<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" title="查看所有与 阿勒泰 相关的照片">阿勒泰</a>大尾羊”在公路上浩浩荡荡地走着,一路扬起滚滚烟尘,甚是壮观。<br />
 
<a href="https://www.camarts.cn/archives/4222.html"><img class="aligncenter size-full wp-image-4229" src="http://static.camarts.cn/images/spinner-1600.gif" data-original="images/1_17.jpg" alt="IMG_2861" width="800" height="533" srcset="images/1_17.jpg 800w, images/1_17.jpg 150w, images/1_17.jpg 300w, images/1_17.jpg 768w, images/1_17.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4229" src="http://img.camarts.cn/2016/01/IMG_2861.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2861" width="800" height="533" srcset="http://img.camarts.cn/2016/01/IMG_2861.jpg 800w, http://img.camarts.cn/2016/01/IMG_2861-150x100.jpg 150w, http://img.camarts.cn/2016/01/IMG_2861-300x200.jpg 300w, http://img.camarts.cn/2016/01/IMG_2861-768x512.jpg 768w, http://img.camarts.cn/2016/01/IMG_2861-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
 
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<!------------------------------------week7 start------------------------------------------------>      
       
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<span class="sep">发表于 </span>2016 年 1 月 10 日<span class="sep"> | </span>
+
        <article id="post-4252" class="post-4252 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-173">
+
<header class="entry-header">
<span class="cat-links">
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<h1 class="entry-title">Week7(9/25/2016-10/1/2016)</h1>
发表在<a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">西北行</a> </span>
+
</header><!-- .entry-header -->
<span class="sep"> | </span>
+
<span class="tag-links">
+
<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%86%b2%e4%b9%8e%e5%b0%94" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">漩涡鸣人</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag"火影</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">鸣樱</a> </span>
+
+
<span class="sep"> | </span>
+
<span class="total-pictures"><a href="https://www.camarts.cn/archives/4222.html">8 张图片</a></span>
+
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+
           
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                <article id="post-4193" class="post-4193 post type-post status-publish format-standard has-post-thumbnail hentry category-150 tag-174 tag-xinjiang tag-177 tag-173">
+
<header class="entry-header">
+
<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4193.html" title="查看《禾木掠影》中的全部作品" rel="bookmark">忍者之路</a></h1>
+
</header><!-- .entry-header -->
+
  
 
<div class="entry-content">
 
<div class="entry-content">
<p>一路北行,来到<a href="https://www.camarts.cn/archives/tag/%e7%a6%be%e6%9c%a8" title="查看所有与 禾木 相关的照片">禾木</a>乡。这里几乎是中国的最西北角,与哈萨克斯坦、俄罗斯和蒙古等三国接壤。禾木地广人稀,和我去过的许多边境小城很像。穿行而过,不见几户人家,除了几个正在建设的小旅馆外,能零星看到的只是几个小木屋和蒙古包。<br />
+
<div class="note-content4">
<a href="https://www.camarts.cn/archives/4193.html"><img class="aligncenter size-full wp-image-4202" src="http://static.camarts.cn/images/spinner-1600.gif" data-original="images/1_18.jpg" alt="IMG_2779" width="800" height="533" srcset="images/1_18.jpg 800w, images/1_18.jpg 150w, images/1_18.jpg 300w, images/1_18.jpg 768w, images/1_18.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4202" src="images/1_18.jpg" alt="IMG_2779" width="800" height="533" srcset="http://img.camarts.cn/2015/12/IMG_2779.jpg 800w, images/1_18.jpg 150w, images/1_18.jpg 300w, images/1_18.jpg 768w, images/1_18.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
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 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.25th</b></h1>
 +
<div style="padding-left:32px;"><li>A colony PCR of pCPC-3031-Ni-13-19-15 was performed with 12 colonies.</li>
 +
<li>Three colonies were proved to be true. And two of them were used to inoculate overnight cultures.</li>
 +
<br/>
 +
<a href="https://static.igem.org/mediawiki/2016/2/2d/Igem-6803-week6-3.png" data-lightbox="no" data-title=" ">
 +
<img align="center" src="https://static.igem.org/mediawiki/2016/2/2d/Igem-6803-week6-3.png" alt="Igem-6803-week6-3" width="800" height="533" ><br/>
 +
</a>
 +
<br/>
 +
 
 +
</div>
 +
<br/>
 +
 
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.26th</b></h1>
 +
<div style="padding-left:32px;"><li>Plasmids pT-13-19-15 were handed in for sequencing, which confirmed its correctness.</li>
 +
<b>The sequencing results for them were correct.</b>
 +
<br/>
 +
</div>
 +
</br>
 +
 
 +
 
 +
 
 +
<b><h1 style="font-size:108%">&nbsp;&nbsp;Sep.28th</b></h1>
 +
<div style="padding-left:32px;"><li>We transformed the expression vector, pCPC-3031-Ni-13-19-15, into <i>Synechocystis 6803 </i>via electroporation.</li>
 +
<br/>
 +
<b>The story of 6803 is not over. Other team members will show the completed process during the presentation. </br>
 +
I will cherish the time spending with you for my whole life. ———by Jiawei Chen and Liangyu Qian</b>
 +
</div>
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 +
 
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<a class="expand-btn4">Show More</a>
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 +
<!------------------------------------week7 end------------------------------------------------>
  
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<span class="sep">发表于 </span>2015 年 12 月 30 日<span class="sep"> | </span>
 
 
发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">春野樱</a> </span>
 
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%b8%83%e5%b0%94%e6%b4%a5" rel="tag">春野樱</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e7%a6%be%e6%9c%a8" rel="tag">漩涡鸣人</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">阿勒泰</a> </span>
 
 
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<header class="entry-header">
 
<h1 class="entry-title"><a href="https://www.camarts.cn/archives/4176.html" title="查看《北疆树林》中的全部作品" rel="bookmark">北疆树林</a></h1>
 
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<p>继续在<a href="https://www.camarts.cn/archives/tag/%e9%93%81%e7%83%ad%e5%85%8b%e6%8f%90" title="查看所有与 铁热克提 相关的照片">铁热克提</a>附近沿着蜿蜒的小道行摄,不知不觉间便绕到这座高山的另一侧。这里的杨树长得更高耸茂密,西斜的阳光恰到好处地将树梢照得金黄透亮,一道道树影投射在绒毛地毯般的甸上,构成近乎完美的光影,令人心旷神怡,不舍离。<br />
 
         
 
           
 
<a href="https://www.camarts.cn/archives/4176.html"><img class="aligncenter size-full wp-image-4177" src="http://static.camarts.cn/images/spinner-1600.gif" data-original="http://img.camarts.cn/2015/12/IMG_2696.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2696" width="800" height="533" srcset="http://img.camarts.cn/2015/12/IMG_2696.jpg 800w, http://img.camarts.cn/2015/12/IMG_2696-150x100.jpg 150w, http://img.camarts.cn/2015/12/IMG_2696-300x200.jpg 300w, http://img.camarts.cn/2015/12/IMG_2696-768x512.jpg 768w, http://img.camarts.cn/2015/12/IMG_2696-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /><noscript><img class="aligncenter size-full wp-image-4177" src="http://img.camarts.cn/2015/12/IMG_2696.jpg?imageView/2/w/800/h/800/q/90" alt="IMG_2696" width="800" height="533" srcset="http://img.camarts.cn/2015/12/IMG_2696.jpg 800w, http://img.camarts.cn/2015/12/IMG_2696-150x100.jpg 150w, http://img.camarts.cn/2015/12/IMG_2696-300x200.jpg 300w, http://img.camarts.cn/2015/12/IMG_2696-768x512.jpg 768w, http://img.camarts.cn/2015/12/IMG_2696-450x300.jpg 450w" sizes="(max-width: 800px) 100vw, 800px" /></noscript></a></p>
 
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<span class="sep">发表于 </span><a href="https://www.camarts.cn/archives/4176.html" title="06:00" rel="bookmark"><time class="entry-date" datetime="2015-12-23T06:00:48+00:00" pubdate>2015 年 12 月 23 日</time></a><span class="by-author"> <span class="sep"> 由 </span> <span class="author vcard"><a class="url fn n" href="https://www.camarts.cn/archives/author/dandyweng" title="查看所有由 Dandy Weng 发布的文章" rel="author">Dandy Weng</a></span></span>                <span class="sep"> | </span>
 
 
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<span class="entry-utility-prep entry-utility-prep-cat-links">发表在</span> <a href="https://www.camarts.cn/archives/category/%e8%a5%bf%e5%8c%97%e8%a1%8c" rel="category tag">西北行</a> </span>
 
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<span class="entry-utility-prep entry-utility-prep-tag-links">标签有</span> <a href="https://www.camarts.cn/archives/tag/%e5%93%88%e5%b7%b4%e6%b2%b3" rel="tag">哈巴河</a>、<a href="https://www.camarts.cn/archives/tag/xinjiang" rel="tag">新疆</a>、<a href="https://www.camarts.cn/archives/tag/%e9%93%81%e7%83%ad%e5%85%8b%e6%8f%90" rel="tag">铁热克提</a>、<a href="https://www.camarts.cn/archives/tag/%e9%98%bf%e5%8b%92%e6%b3%b0" rel="tag">阿勒泰</a> </span>
 
 
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<span class="total-pictures"><a href="https://www.camarts.cn/archives/4176.html">13 张照片</a></span>
 
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Latest revision as of 10:44, 5 November 2016

TEAM TIANJIN


Team Tianjin-Attribution

Notes For Cyanobacteria

Week1(7/31/2016-8/6/2016)

  Jul.31th

  • Cultivation: 30µL mother liquid of Synechococcus sp PCC 7942 (wild type)were cultivated in 10 mL BG-11-media at 30°C and 140rpm.
  • The genome DNA of 7942 was extracted using a Genomic DNA Isolation Kit.

  • Show More

    Week2(8/14/2016-8/20/2016)

  • Synechococcus sp PCC 7942 had no signals of life.

  • Igem-6803-week2


    Show More

    Week3(8/28/2016-9/3/2016)

      Aug.29th

  • pMV-G19 and pMV-G15 containing our target genes were received.

  • Igem-6803-week3-1


  • Colonies were used to inoculate overnight cultures.

  •   Aug.30th

  • Plasmids were isolated using a miniprep kit.
  • Amplification of 19 and 15 with Q5 High-Fidelity DNA Polymerase out of E.coli.
  •   19 amplification at 65.0°C with 19.rev/fwd primes.
            PCR worked, positive control worked, no amplification of 19.
      15 amplification at 65.0°C with 15.rev/fwd primes.
            PCR worked, positive control worked, no amplification of 15.
  • A product length of 900 bp was expected. The gel shows that most plasmids seem to be correct.
  •   This result was confirmed by sequencing.
  • The fragments of 19 and 15 were purified with PCR Purification Kit.

  •   Aug.31th

  • Ligation of 15 with 19.
  • We add a single 3`-adenine overhang to each end of the fragment of 19 and then purified with DNA Purification Kit.
  • 19 was ligated into T vectors via TA clone and transformed into E.coli via heat shock.

  •   Sep.1th

  • A colony PCR was performed with five colonies.
  • Gel electrophoresis showed that 5 colonies were positive for insertion of 19.
  • Two of these colonies containing 19 were used to inoculate overnight cultures.
  • 15 gene fragment was phosphorylated.

  •   Sep.2th

  • Plasmids containing T vector with 19(pT-19)were isolated using a miniprep kit.
  • Mono-restriction digest of pT-19 with stu I.
  • The enzyme-digested product was dephosphorylation.

  • Igem-6803-week3-2

  • Dephosphorylated plasmid and phosphorylated gene 15 were connected.
  • Ligation product was transformed into E.coli via heat shock.

  •   Sep.3th

  • A colony PCR was performed with twelve colonies.
  • Gel electrophoresis showed that 2 colonies were positive for connecting the plasmid and gene fragment.
  • These two colonies were used to inoculate overnight cultures.

  • Show More

    Week4(9/4/2016-9/10/2016)

      Sep.4th

  • Plasmids with correct sequence of 19-15 were isolated using a miniprep kit.
  • Mono-restriction digest of pT-19-15 with Nru I.
  • The enzyme-digested product was dephosphorylation.

  •   Sep.6th

  • Colonies containing gene 13 were used to inoculate overnight cultures.

  •   Sep.7th

  • Plasmids were isolated using a miniprep kit.
  • Amplification of 13 with Q5 High-Fidelity DNA Polymerase out of E.coli
  • 13 amplification at 65.0°C with 13.rev/fwd primes
  •   PCR worked, positive control worked, no amplification of 13
  • The fragments of 13 were purified with PCR Purification Kit.

  •   Sep.8th

  • 13 gene fragment was phosphorylated.

  •   Sep.9th

  • Insertion of Ni promoter and ligation of 13-19-15
  • Ni inducible promoter was ligated into pCPC-3301 vector.
  • Phosphorylated 13 was ligated into pT-19-15 and transformed into E.coli via heat shock.
  • Single colonies were obtained by plating.

  •   Sep.10th

  • A colony PCR of Ni inducible promoter(pCPC-3301-Ni) was performed with 12 colonies.
  •   Two of the successful ones were used to inoculate overnight cultures.
  • A colony PCR of pT-13-19-15 was performed with 7 colonies.
  •   Two of the successful ones were used to inoculate overnight cultures.

    Igem-6803-week4


  • Show More

    Week5(9/11/2016-9/17/2016)

      Sep.11th

  • Two kinds of plasmids were isolated using a miniprep kit.

  •   Sep.14th

  • The sequencing results for both of them were error.

  •   Sep.15th

  • Colonies containing Ni inducible promoter were used to inoculate overnight cultures.
  • PCR was performed to check if the gene fragments were ligated correctly.
  •   13_ fwd and 15_rev on pT-13-19-15
  • Gel electrophoresis showed that it failed.

  •   Sep.16th

  • Plasmids pCPC-3031-Ni were isolated using a miniprep kit.

  •   Sep.17th

  • Several PCRs were performed to check if the gene fragments were ligated correctly.
  •   13_fwd and 13_rev on pT-13-19-15
      19_fwd and 19_rev on pT-13-19-15
      15_fwd and 15_rev on pT-13-19-15
      13_fwd and 19_rev on pT-13-19-15
      19_fwd and 15_rev on pT-13-19-15
      13_ wd and 15_rev on pT-13-19-15
    The fourth and sixth ones were not successful.

    Igem-6803-week5

  • Repetition: Phosphorylated 13 was ligated into pT-19-15 and transformed into E.coli via heat shock.

  • Show More

    Week6(9/18/2016-9/24/2016)

      Sep.18th

    Repetition: Several PCRs were performed to check if the gene fragments were ligated correctly.
      13_fwd and 13_rev on pT-13-19-15
      13_fwd and 19_rev on pT-13-19-15
    The second one was failed.

      Sep.21th

  • Medium preparation :BG-11.
  • 19_ fwd and 15_rev were used to amplify 19-15.

  •   Sep.22th

  • Gel electrophoresis showed that amplification of fragments was successfull.
  • Ligated 13 and 19-15 via overlap PCR.
  • This PCR worked well and the products were extracted from the gel using a Agarose Gel DNA Extration Kit.
  • Restriction digest on pCPC-3031-Ni with Sac I.

  • Igem-6803-week6-1
  • The fragment 13-19-15 was ligated onto T vector and transformed into E.coli via heat shock.
  • Igem-6803-week6-2

      Sep.23th

  • A colony PCR of pT-13-19-15 was performed with 12 colonies.
  • Two of these colonies containing pT-13-19-15 were used to inoculate overnight cultures.
  • 13-19-15 gene fragment was phosphorylated.
  • Phosphorylated 13-19-15 was ligated into pCPC-3031-Ni and transformed into E.coli via heat shock.

  •   Sep.24th

  • Plasmids pT-13-19-15 were isolated using a miniprep kit.

  • Show More

    Week7(9/25/2016-10/1/2016)

      Sep.25th

  • A colony PCR of pCPC-3031-Ni-13-19-15 was performed with 12 colonies.
  • Three colonies were proved to be true. And two of them were used to inoculate overnight cultures.

  • Igem-6803-week6-3


      Sep.26th

  • Plasmids pT-13-19-15 were handed in for sequencing, which confirmed its correctness.
  • The sequencing results for them were correct.

      Sep.28th

  • We transformed the expression vector, pCPC-3031-Ni-13-19-15, into Synechocystis 6803 via electroporation.

  • The story of 6803 is not over. Other team members will show the completed process during the presentation.
    I will cherish the time spending with you for my whole life. ———by Jiawei Chen and Liangyu Qian
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    Notice: This page is currently under construction. Contents in this page are temporaory and will be modified several times before the final release.     — 2016 iGEM Team Tianjin


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