Difference between revisions of "Team:Edinburgh UG"

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{{Edinburgh_UG}}
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{{EdigemUG16_Home}}
 
<html>
 
<html>
  
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<div class="column full_size" >
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<body>
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<img src="http://placehold.it/800x300/d3d3d3/f2f2f2">
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−
</div>
+
  
−
<div class="column full_size" >
 
−
<h2> Welcome to iGEM 2016! </h2>
 
−
<p>Your team has been approved and you are ready to start the iGEM season! </p>
 
  
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</div>  
+
    <head>
 +
<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.5/css/bootstrap.min.css">
 +
<link href="http://fonts.googleapis.com/css?family=Pacifico" rel="stylesheet" type="text/css">
 +
<link rel="stylesheet" href="http://cdn.jsdelivr.net/jquery.slick/1.5.7/slick.css">
 +
<script src="http://cdn.jsdelivr.net/jquery.slick/1.5.7/slick.min.js"></script>
 +
<script src="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.5/js/bootstrap.min.js"></script>
 +
    </head>
  
−
<div class="column half_size" >
+
    <style type="text/css">
−
<h5>Before you start: </h5>
+
−
<p> Please read the following pages:</p>
+
−
<ul>
+
−
<li>  <a href="https://2016.igem.org/Requirements">Requirements page </a> </li>
+
−
<li> <a href="https://2016.igem.org/Wiki_How-To">Wiki Requirements page</a></li>
+
−
<li> <a href="https://2016.igem.org/Resources/Template_Documentation"> Template Documentation </a></li>
+
−
</ul>
+
−
</div>
+
  
−
<div class="column half_size" >
+
    #contentSub, #footer-box, #catlinks, #search-controls, #p-logo, .printfooter, .firstHeading,.visualClear
−
<div class="highlight">
+
−
<h5> Styling your wiki </h5>
+
−
<p>You may style this page as you like or you can simply leave the style as it is. You can easily keep the styling and edit the content of these default wiki pages with your project information and completely fulfill the requirement to document your project.</p>
+
−
<p>While you may not win Best Wiki with this styling, your team is still eligible for all other awards. This default wiki meets the requirements, it improves navigability and ease of use for visitors, and you should not feel it is necessary to style beyond what has been provided.</p>
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−
</div>
+
−
</div>
+
  
−
<div class="column full_size" >
+
    {
−
<h5> Wiki template information </h5>
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−
<p>We have created these wiki template pages to help you get started and to help you think about how your team will be evaluated. You can find a list of all the pages tied to awards here at the <a href="https://2016.igem.org/Judging/Pages_for_Awards/Instructions">Pages for awards</a> link. You must edit these pages to be evaluated for medals and awards, but ultimately the design, layout, style and all other elements of your team wiki is up to you!</p>
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−
</div>
+
    display:  none;
  
 +
    }
  
 +
    #top_menu_under
 +
    {
 +
    height: 0;
 +
    }
  
 +
    #top-section {
 +
    height: 0px;
 +
    border-top: 0;
 +
    border-left: none;
 +
    border-right: none;
 +
    }
 +
      #globalWrapper
 +
        {
 +
        width: 100%;
 +
        height: 100%;
 +
        border: 0px;
 +
        background-color: #ffffff;
 +
        margin: 0px;
 +
        padding: 0px;
 +
        font-size: 100%
 +
        }
  
−
<div class="column half_size" >
+
        #content
−
<h5> Editing your wiki </h5>
+
        {
−
<p>On this page you can document your project, introduce your team members, document your progress and share your iGEM experience with the rest of the world! </p>
+
          width: 100%;
−
<p> <a href="https://2016.igem.org/wiki/index.php?title=Team:Example&action=edit"> Click here to edit this page! </a></p>
+
          height: 100%;
 +
          margin-left: auto;
 +
          margin-right: auto;
 +
          background-color: #ffffff;
 +
          padding: 0px;
 +
          font-size: 100%;
 +
        }
  
−
</div>
 
  
  
−
<div class="column half_size" >
+
    .image-bg-fluid-height,
−
<h5>Tips</h5>
+
    .image-bg-fixed-height {
−
<p>This wiki will be your team’s first interaction with the rest of the world, so here are a few tips to help you get started: </p>
+
        text-align: center;
−
<ul>
+
        -webkit-background-size: cover;
−
<li>State your accomplishments! Tell people what you have achieved from the start. </li>
+
        -moz-background-size: cover;
−
<li>Be clear about what you are doing and how you plan to do this.</li>
+
        background-size: cover;
−
<li>You have a global audience! Consider the different backgrounds that your users come from.</li>
+
        -o-background-size: cover;
−
<li>Make sure information is easy to find; nothing should be more than 3 clicks away.  </li>
+
−
<li>Avoid using very small fonts and low contrast colors; information should be easy to read.  </li>
+
−
<li>Start documenting your project as early as possible; don’t leave anything to the last minute before the Wiki Freeze. For a complete list of deadlines visit the <a href="https://2016.igem.org/Calendar">iGEM 2016 calendar</a> </li>
+
−
<li>Have lots of fun! </li>
+
−
</ul>
+
−
</div>
+
  
 +
    }
  
−
<div class="column half_size" >
+
    .image-bg-fluid-height {
−
<h5>Inspiration</h5>
+
    background: url('https://static.igem.org/mediawiki/2016/1/15/Edinburgh2_front_page.jpeg');
−
<p> You can also view other team wikis for inspiration! Here are some examples:</p>
+
      padding: 450px 0;
−
<ul>
+
        margin-top: -30px;
−
<li> <a href="https://2014.igem.org/Team:SDU-Denmark/"> 2014 SDU Denmark </a> </li>
+
    }
−
<li> <a href="https://2014.igem.org/Team:Aalto-Helsinki">2014 Aalto-Helsinki</a> </li>
+
−
<li> <a href="https://2014.igem.org/Team:LMU-Munich">2014 LMU-Munich</a> </li>
+
−
<li> <a href="https://2014.igem.org/Team:Michigan"> 2014 Michigan</a></li>
+
−
<li> <a href="https://2014.igem.org/Team:ITESM-Guadalajara">2014 ITESM-Guadalajara </a></li>
+
−
<li> <a href="https://2014.igem.org/Team:SCU-China"> 2014 SCU-China </a></li>
+
−
</ul>
+
−
</div>
+
  
−
<div class="column half_size" >
+
    .image-bg-fixed-height {
−
<h5> Uploading pictures and files </h5>
+
    background: url('http://lorempixel.com/g/1920/500/') no-repeat center center scroll;
−
<p> You can upload your pictures and files to the iGEM 2016 server. Remember to keep all your pictures and files within your team's namespace or at least include your team's name in the file name. <br />
+
        height: 450px;
−
When you upload, set the "Destination Filename" to <code>Team:YourOfficialTeamName/NameOfFile.jpg</code>. (If you don't do this, someone else might upload a different file with the same "Destination Filename", and your file would be erased!)</p>
+
    }
  
 +
    .img-center {
 +
      position: absolute;
 +
    margin: auto;
 +
    top: 125px;
 +
    left: 400px;
 +
    right: 0px;
 +
}
  
−
<div class="button_click"  onClick=" parent.location= 'https://2016.igem.org/Special:Upload '"> 
+
    }
−
UPLOAD FILES
+
−
</div>
+
  
 +
    section {
 +
        padding: 75px 0;
 +
    }
 +
 +
    .section-heading {
 +
        margin: 30px 0;
 +
        font-size: 4em;
 +
    }
 +
 +
    .section-lead {
 +
        margin: 30px 0;
 +
    }
 +
 +
    .section-paragraph {
 +
        margin: 30px 0;
 +
    }
 +
 +
    .header-image {
 +
        display: block;
 +
        width: 100%;
 +
        text-align: center;
 +
 +
        -webkit-background-size: cover;
 +
        -moz-background-size: cover;
 +
        background-size: cover;
 +
        -o-background-size: cover;
 +
    }
 +
 +
    .headline {
 +
        padding: 120px 0;
 +
    }
 +
 +
    @media(max-width:768px) {
 +
        .container {
 +
            margin: 0 15px;
 +
        }
 +
      }
 +
 +
    p1 {
 +
    text-align: center;
 +
    font-size: 200%;
 +
    }
 +
 +
</style>
 +
 +
<script>
 +
  $(function(){
 +
$('.your-class').slick({arrows:false});
 +
    $('#next').click(function(){
 +
    $('.your-class').slick('slickNext');
 +
    });
 +
    $('#prev').click(function(){
 +
    $('.your-class').slick('slickPrev');
 +
    });
 +
});
 +
</script>
 +
 +
<div id="custom-bootstrap-menu" class="navbar navbar-default navbar-fixed-top" role="navigation">
 +
    <div class= "container-fluid">
 +
      <!-- Navigation -->
 +
      <nav class="navbar navbar-inverse navbar-fixed-top" role="navigation">
 +
          <div class="container">
 +
              <!-- Brand and toggle get grouped for better mobile display -->
 +
              <div class="navbar-header">
 +
                  <button type="button" class="navbar-toggle" data-toggle="collapse" data-target="#bs-example-navbar-collapse-1">
 +
                      <span class="sr-only">Toggle navigation</span>
 +
                      <span class="icon-bar"></span>
 +
                      <span class="icon-bar"></span>
 +
                      <span class="icon-bar"></span>
 +
                  </button>
 +
                  <a class="navbar-brand" href="https://2016.igem.org/Team:Edinburgh_UG">
 +
                      <img src="https://static.igem.org/mediawiki/2016/9/92/Edinburgh_logo2_MINI.png" alt="">
 +
                  </a>
 +
              </div>
 +
 +
              <!-- Collect the nav links, forms, and other content for toggling -->
 +
              <div class="collapse navbar-collapse" id="bs-example-navbar-collapse-1">
 +
                  <ul class="nav navbar-nav">
 +
                      <li>
 +
                          <a href="https://2016.igem.org/Team:Edinburgh_UG">Home</a>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Team<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Team">Team</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Attribution">Attribution</a></li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Human Practices<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Overview">Overview</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/HP/Silver">Silver</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/HP/Gold">Gold</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Medal_Criteria">Medal Criteria</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Integrated_Practices">Integrated Practices</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Engagement">Engagement</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Ethics">Ethics</a> </li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Mary_Queen_of _Scots">Mary Queen of Scots</a> </li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Project<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Description">Description</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Design">Design</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Proof">Proof of Concept</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Demonstrate">Demonstrate</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Notebook">Notebook</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Protocols">Protocols</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Limitations">Advantages and Limitations</a></li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Informatics<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Lexicon_Encoding">Lexicon Encoding</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Error_Correction">Error Correction</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Encryption">Encryption</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Files">Files</a></li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Parts<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Basic_Part">Basic Parts</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Composite_Part">Composite Parts</a></li>
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Part_Collection">Part Collection</a> </li>
 +
                        </ul>
 +
                      </li>
 +
                      <li>
 +
                          <a href="https://2016.igem.org/Team:Edinburgh_UG/Collaboration">Collaboration</a>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Awards<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Software">Software</a> </li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Safety<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Safety/Biological Safety">Biological Safety</a></li>
 +
                        </ul>
 +
                      </li>
 +
                      <li class="dropdown">
 +
                        <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-expanded="false">Interlab<span class="caret"></span></a>
 +
                        <ul class="dropdown-menu" role="menu">
 +
                          <li><a href="https://2016.igem.org/Team:Edinburgh_UG/Plate_Reader">Plate Reader</a></li>
 +
                        </ul>
 +
                      </li>
 +
                  </ul>
 +
              </div>
 +
              <!-- /.navbar-collapse -->
 +
          </div>
 +
          <!-- /.container -->
 +
      </nav>
 +
    </div>
 
</div>
 
</div>
  
 +
<!-- End of menu  -->
 +
 +
<!-- End of menu  -->
 +
 +
 +
 +
  <header class="image-bg-fluid-height">
 +
      <img class="img-responsive img-center" src="https://static.igem.org/mediawiki/2016/d/d0/Babbled_logo.png" alt="">
 +
  </header>
  
 +
  <header class="header-image">
 +
      <div class="headline">
 +
          <div class="container">
 +
              <h1>The University of Edinburgh Undergraduate iGEM team 2016 presents:</h1>
 +
              <h2>The Next Generation of Information Storage</h2>
 +
          </div>
 +
      </div>
 +
  </header>
  
 +
  <div class="container-fluid">
 +
    <div class="row full-size">
 +
        <img src="https://static.igem.org/mediawiki/2016/0/06/EdiGEM16ughomedata.jpeg" class="img-responsive center-block">
 +
  </div>
  
 +
  <div class="row text-center">
 +
      <div class="your-class">
 +
          <div class="row">
 +
              <div class="container">
 +
                  <div class="col-xs-3"></div>
 +
                  <div class="col-xs-3">
 +
                      <div>
 +
                      <img src="https://static.igem.org/mediawiki/2016/5/55/EdiGEM16UGdensity.png" class="img-responsive center-block">
 +
                      </div>
 +
                  </div>
 +
                  <div class="col-xs-3">
 +
                      <h3 style="font-size:200%;" class="text-center">Density</h3>
 +
                      <p class="text-center">DNA has 1000 times the </p>
 +
                      <p class="text-center">density of flash storage</p>
 +
                  </div>
 +
                  <div class="col-xs-3"></div>
 +
              </div>
 +
          </div>
 +
          <div class="row">
 +
              <div class="container">
 +
                  <div class="col-xs-3"></div>
 +
                  <div class="col-xs-3">
 +
                      <div>
 +
                      <img src="https://static.igem.org/mediawiki/2016/2/26/EdiGEM16UGdollar.png" class="img-responsive center-block">
 +
                      </div>
 +
                  </div>
 +
                  <div class="col-xs-3">
 +
                      <h3 style="font-size:200%;" class="text-center">Affordability</h3>
 +
                      <p class="text-center">All our encoding programmes </p>
 +
                      <p class="text-center">are open source and initial </p>
 +
                      <p class="text-center">synthesis of the lexicon is done </p>
 +
                      <p class="text-center">for you providing significant </p>
 +
                      <p class="text-center">cost reductions on existing </p>
 +
                      <p class="text-center">methods</p>
 +
                  </div>
 +
                  <div class="col-xs-3"></div>
 +
              </div>
 +
          </div>
 +
          <div class="row">
 +
              <div class="container">
 +
                  <div class="col-xs-3"></div>
 +
                  <div class="col-xs-3">
 +
                      <div>
 +
                      <img src="https://static.igem.org/mediawiki/2016/8/81/EdiGEM16UGhourglass.jpeg" class="img-responsive center-block">
 +
                      </div>
 +
                  </div>
 +
                  <div class="col-xs-3">
 +
                      <h3 style="font-size:200%;" class="text-center">Longevity</h3>
 +
                      <p class="text-center">DNA can last for </p>
 +
                      <p class="text-center">thousands of years </p>
 +
                      <p class="text-center">without consuming </p>
 +
                      <p class="text-center">resources; modern  </p>
 +
                      <p class="text-center">hard drives can only </p>
 +
                      <p class="text-center">last 50</p>
 +
                  </div>
 +
                  <div class="col-xs-3"></div>
 +
              </div>
 +
          </div>
 +
          <div class="row">
 +
              <div class="container">
 +
                  <div class="col-xs-3"></div>
 +
                  <div class="col-xs-3">
 +
                      <div>
 +
                      <img src="https://static.igem.org/mediawiki/2016/e/e0/EdiGEM16UGpuzzle.png" class="img-responsive center-block">
 +
                      </div>
 +
                  </div>
 +
                  <div class="col-xs-3">
 +
                      <h3 style="font-size:200%;" class="text-center">Modularity</h3>
 +
                      <p class="text-center">Assembly of our BabbleBricks </p>
 +
                      <p class="text-center">is unrestricted and completely </p>
 +
                      <p class="text-center">customisable </p>
 +
                  </div>
 +
                  <div class="col-xs-3"></div>
 +
              </div>
 +
          </div>
 +
      </div>
 +
  </div>
 +
  <div class="row text-center">
 +
    <div id="prev" class="col-xs-2 col-xs-offset-4 well ">previous</div>
 +
    <div id="next" class="col-xs-2  well">next</div>
 +
  </div>
  
 +
  <div class="container-fluid">
 +
    <div class = "row full-size">
 +
        <div class="col-sm-2">
 +
        </div>
 +
        <div class="col-sm-8">
 +
          <p></p>
 +
          <h3 style="font-size:400%;" class="text-center">Abstract</h3>
 +
          <br>
 +
          <h2>
 +
In 2014, over 10 sextillion bits of data were digitally stored worldwide. To put this in context, there are only 1 sextillion grains of sand on this entire Earth. According to IBM, we generate over 2.5 billion gigabytes daily through tweets, emails and Facebook posts! The University of Edinburgh’s undergraduate team has designed a DNA storage system that is a sustainable, dense and long-lasting alternative to magnetic tape data storage. The storage system relies on modular DNA fragments that can flexibly and cost effectively store any type of data. Modularity makes BabblED the cheapest and most accessible DNA storage system available. The system also boasts new and novel techniques to incorporate error-correcting and encryption in DNA storage. In fact, this ‘DNA Typewriter’ has already been implemented by the National Library of Scotland to archive one of their most precious manuscripts: the last letter of Mary Queen of Scots.
 +
</h2>
 +
    </div>
 +
    <div class="col-sm-2">
 +
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 +
  <div class="row">
 +
          <div class="box">
 +
              <div class="col-lg-12">
 +
                  <hr>
 +
                  <h2 class="intro-text text-center">Follow
 +
                      <strong>Us</strong>
 +
                  </h2>
 +
                  <hr>
 +
                  <div class="intro-text text-center">
 +
                      <ul class="list-inline banner-social-buttons">
 +
                          <li>
 +
                              <a href="https://twitter.com/EdiGEM2016"><img src="https://static.igem.org/mediawiki/2016/9/94/Edinburgh2_t2.jpg"></img></a>
 +
                          </li>
 +
                          <li>
 +
                              <a href="https://www.facebook.com/EdiGEM2016"><img src="https://static.igem.org/mediawiki/2016/c/ce/Edinburgh2_f2.png"></img></a>
 +
                          </li>
 +
                          <li>
 +
                              <a href="https://www.instagram.com/edigem2016/"><img src="https://static.igem.org/mediawiki/2016/6/64/Edinburgh2_insta2.png"></img></a>
 +
                          </li>
 +
                      </ul>
 +
                  </div>
 +
              </div>
 +
          </div>
 +
      </div>
 +
      <br>
 +
      <br>
  
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Latest revision as of 23:43, 19 October 2016

The University of Edinburgh Undergraduate iGEM team 2016 presents:

The Next Generation of Information Storage

Density

DNA has 1000 times the

density of flash storage

Affordability

All our encoding programmes

are open source and initial

synthesis of the lexicon is done

for you providing significant

cost reductions on existing

methods

Longevity

DNA can last for

thousands of years

without consuming

resources; modern

hard drives can only

last 50

Modularity

Assembly of our BabbleBricks

is unrestricted and completely

customisable

Abstract


In 2014, over 10 sextillion bits of data were digitally stored worldwide. To put this in context, there are only 1 sextillion grains of sand on this entire Earth. According to IBM, we generate over 2.5 billion gigabytes daily through tweets, emails and Facebook posts! The University of Edinburgh’s undergraduate team has designed a DNA storage system that is a sustainable, dense and long-lasting alternative to magnetic tape data storage. The storage system relies on modular DNA fragments that can flexibly and cost effectively store any type of data. Modularity makes BabblED the cheapest and most accessible DNA storage system available. The system also boasts new and novel techniques to incorporate error-correcting and encryption in DNA storage. In fact, this ‘DNA Typewriter’ has already been implemented by the National Library of Scotland to archive one of their most precious manuscripts: the last letter of Mary Queen of Scots.

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