Difference between revisions of "Team:SVCE CHENNAI/Parts"

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<h1>OVERVIEW OF PARTS</h1>
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<p>Each team will make new parts during iGEM and will submit them to the Registry of Standard Biological Parts. The iGEM software provides an easy way to present the parts your team has created. The <code>&lt;groupparts&gt;</code> tag (see below) will generate a table with all of the parts that your team adds to your team sandbox.</p>
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<p>Remember that the goal of proper part documentation is to describe and define a part, so that it can be used without needing to refer to the primary literature. Registry users in future years should be able to read your documentation and be able to use the part successfully. Also, you should provide proper references to acknowledge previous authors and to provide for users who wish to know more.</p>
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<h5>Note</h5>
 
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<p>Note that parts must be documented on the <a href="http://parts.igem.org/Main_Page"> Registry</a>. This page serves to <i>showcase</i> the parts you have made. Future teams and other users and are much more likely to find parts by looking in the Registry than by looking at your team wiki.</p>
 
 
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Range: BBa_K2113001-BBa_K2113010
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<h5>Adding parts to the registry</h5>
 
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<p>You can add parts to the Registry at our <a href="http://parts.igem.org/Add_a_Part_to_the_Registry">Add a Part to the Registry</a> link.</p>
 
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<p>We encourage teams to start completing documentation for their parts on the Registry as soon as you have it available. The sooner you put up your parts, the better you will remember all the details about your parts. Remember, you don't need to send us the DNA sample before you create an entry for a part on the Registry. (However, you <b>do</b> need to send us the DNA sample before the Jamboree. If you don't send us a DNA sample of a part, that part will not be eligible for awards and medal criteria.)</p>
 
 
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BASIC PARTS:
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<h5>What information do I need to start putting my parts on the Registry?</h5>
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<p>The information needed to initially create a part on the Registry is:</p>
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<li>Part Name</li>
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<li>Part type</li>
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<li>Creator</li>
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<li>Sequence</li>
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<li>Short Description (60 characters on what the DNA does)</li>
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<li>Long Description (Longer description of what the DNA does)</li>
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<li>Design considerations</li>
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We encourage you to put up <em>much more</em> information as you gather it over the summer. If you have images, plots, characterization data and other information, please also put it up on the part page. </p>
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<h5>Inspiration</h5>
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    <li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; Parts BBa_K2113004 and Part BBa_K2113005 are basic parts, coding for the antimicrobial peptides,the former without glycine and the later with glycine. A variant with extra glycine residues is used to increase the half life of the peptide, consistent with the N-end rule. </li>
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<p>We have a created  a <a href="http://parts.igem.org/Well_Documented_Parts">collection of well documented parts</a> that can help you get started.</p>
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<li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; To read more about our basic parts <a href="https://2016.igem.org/Team:SVCE_CHENNAI/Basic_Part">click here</a></li>
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<p> You can also take a look at how other teams have documented their parts in their wiki:</p>
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<li><a href="https://2014.igem.org/Team:MIT/Parts"> 2014 MIT </a></li>
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COMPOSITE PARTS:
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<li><a href="https://2014.igem.org/Team:Heidelberg/Parts"> 2014 Heidelberg</a></li>
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<li><a href="https://2014.igem.org/Team:Tokyo_Tech/Parts">2014 Tokyo Tech</a></li>
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<li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; Parts BBa_K2113001 is a composite part coding for a RNA thermometer followed by expression of chromoprotein cj blue,this can be used for the characterization of RNA thermometer under different promoters. </li>
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    <li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; Parts BBa_K2113002 is a composite part that serves as a temperature sensitive system with a lambda pr promoter under cI regulation. BBa_K2113003 similarly is a temperature sensitive system with a RNA thermometer.</li>
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    <li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; Parts BBa_K2113007 and BBa_K2113008 are composite parts regulating the expression of basic parts BBa_K2113004 and BBa_K2113005 under a lac promoter, so that the system gets activated in the presence of milk.</li>
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    <li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp; Part BBa_K2113006 contains a strong promoter regulating part BBa_k211301 downstream of which a double terminator is present. BBa_K2113009 and BBa_K2113010 are composite parts regulating the expression of basic parts BBa_K2113004 and BBa_K2113005 under a RNA thermometer.</li>          
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<li><span><i class="fa fa-caret-right" aria-hidden="true"></i></span>&nbsp;&nbsp;To read more about our composite parts <a href="https://2016.igem.org/Team:SVCE_CHENNAI/Composite_Part">click here</a></li>
 
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<h5>Part Table </h5>
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<h2>PARTS COLLECTION:</h2>
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<groupparts>iGEM2016 Example</groupparts>
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    <th>Part Name</th>
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    <td>RNA thermometer + cjBlue</td>
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    <td><a href="http://parts.igem.org/Part:BBa_K2113001">BBa_K2113001 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>     
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      <td>temperature sensitive system with lambda pr promoter under cI regulation</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113002">BBa_K2113002 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>temperature sensitive system with RNA thermometer</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113003" target="blank_">BBa_K2113003 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>AMP without glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113004" target="blank_">BBa_K2113004 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>AMP with glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113005" target="blank_">BBa_K2113005 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>temperature sensitive system with RNA thermometer with cj blue</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113006" target="blank_">BBa_K2113006 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>lac inducible AMP without glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113007" target="blank_">BBa_K2113007 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>lac inducible AMP with glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113008" target="blank_">BBa_K2113008 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>RNA thermometer and AMP without glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113009" target="blank_">BBa_K2113009 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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      <td>RNA thermometer and AMP with glycine</td>
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      <td><a href="http://parts.igem.org/Part:BBa_K2113010" target="blank_">BBa_K2113010 <i class="fa fa-external-link-square" aria-hidden="true"></i></a></td>
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{{SVCE_CHENNAI/sponsors}}

Latest revision as of 07:05, 30 November 2016

Lactoshield - SVCE_CHENNAI Lactoshield - SVCE_CHENNAI

Lactoshield - SVCE_CHENNAI Lactoshield - SVCE_CHENNAI

OVERVIEW OF PARTS

Range: BBa_K2113001-BBa_K2113010

BASIC PARTS:

  •    Parts BBa_K2113004 and Part BBa_K2113005 are basic parts, coding for the antimicrobial peptides,the former without glycine and the later with glycine. A variant with extra glycine residues is used to increase the half life of the peptide, consistent with the N-end rule.
  •    To read more about our basic parts click here

    • COMPOSITE PARTS:

  •    Parts BBa_K2113001 is a composite part coding for a RNA thermometer followed by expression of chromoprotein cj blue,this can be used for the characterization of RNA thermometer under different promoters.
  •    Parts BBa_K2113002 is a composite part that serves as a temperature sensitive system with a lambda pr promoter under cI regulation. BBa_K2113003 similarly is a temperature sensitive system with a RNA thermometer.
  •    Parts BBa_K2113007 and BBa_K2113008 are composite parts regulating the expression of basic parts BBa_K2113004 and BBa_K2113005 under a lac promoter, so that the system gets activated in the presence of milk.
  •    Part BBa_K2113006 contains a strong promoter regulating part BBa_k211301 downstream of which a double terminator is present. BBa_K2113009 and BBa_K2113010 are composite parts regulating the expression of basic parts BBa_K2113004 and BBa_K2113005 under a RNA thermometer.
  •   To read more about our composite parts click here

PARTS COLLECTION:

Part Name Part Number
RNA thermometer + cjBlue BBa_K2113001
temperature sensitive system with lambda pr promoter under cI regulation BBa_K2113002
temperature sensitive system with RNA thermometer BBa_K2113003
AMP without glycine BBa_K2113004
AMP with glycine BBa_K2113005
temperature sensitive system with RNA thermometer with cj blue BBa_K2113006
lac inducible AMP without glycine BBa_K2113007
lac inducible AMP with glycine BBa_K2113008
RNA thermometer and AMP without glycine BBa_K2113009
RNA thermometer and AMP with glycine BBa_K2113010
Lactoshield - SVCE_CHENNAI Lactoshield - SVCE_CHENNAI
Lactoshield - SVCE_CHENNAI

Sponsors

igemsvce@gmail.com

Sri Venkateswara College of Engineering
Tamil Nadu, India

    

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