Difference between revisions of "Team:LambertGA/Attributions"

 
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       <a href="https://2016.igem.org/Team:LambertGA/Team" class="dropbtn">Team</a>
 
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       <div class="dropdown-content">
 
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      <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Team">Team</a>
 
       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Collaborations">Collaborations</a>
 
       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Collaborations">Collaborations</a>
 
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       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Experiments">Experiments</a>
 
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       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Proof">Proof of Concept</a>
 
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      <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Demonstrate">Demonstrate</a>
 
 
       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Results">Results</a>
 
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       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Notebook">Notebook</a>
 
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       <a href="https://2016.igem.org/Team:LambertGA/Parts" class="dropbtn">Parts</a>
 
       <a href="https://2016.igem.org/Team:LambertGA/Parts" class="dropbtn">Parts</a>
 
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      <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Parts">Parts</a>
 
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       <a href="https://2016.igem.org/Team:LambertGA/Human_Practices" class="dropbtn">Human Practices</a>
 
       <a href="https://2016.igem.org/Team:LambertGA/Human_Practices" class="dropbtn">Human Practices</a>
 
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<a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Human_Practices">Human Practices</a>
 
       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/HP/Silver">Silver</a>
 
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       <a class="drplink" style="transition: color 0.5s ease-in-out;" href="https://2016.igem.org/Team:LambertGA/Integrated_Practices">Integrated Practices</a>
 
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<center> <h1 id="MainTitle"><b> Attributions </b></h1> <img src="https://static.igem.org/mediawiki/2016/2/26/T--LambertGA--purpleline.jpg" style="width:18%; margin:auto;"></center>
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<center> <h1 id="MainTitle"><b> Attributions and Acknowledgements </b></h1> <img src="https://static.igem.org/mediawiki/2016/2/26/T--LambertGA--purpleline.jpg" style="width:18%; margin:auto;"></center>
  
 
<br>
 
<br>
 +
<h3> Attributions </h3>
  
 
<h2>Research</h2>
 
<h2>Research</h2>
−
<p> <b> Constructs: </b> Jack Kwon, Arjun Bhatt, Kevin Tao </p>
+
<p> <hh3> <b> Constructs: </b> Arjun Bhatt, Jack Kwon </hh3> </p>
−
<p> <b> Camera: </b> Elynna Chang, Noora Chandasir, David Standeven </p>
+
<p> <hh3> <b> Measurement Model: </b> Elynna Chang, Noora Chandasir, David Standeven, Jackson Harris </hh3></p>
  
 
<h2>Labwork </h2>
 
<h2>Labwork </h2>
−
<p> Jack Kwon, Arjun Bhatt, Sara Cleland, Julia Leveille, Alyssa Franklin, Lauren Hong, Jackson Harris, Kevin Tao </p>
+
<p> <hh3> Arjun Bhatt, Jack Kwon, Sara Cleland, Julia Leveille, Alyssa Franklin, Lauren Hong, Jackson Harris, Kevin Tao, David Standeven </hh3></p>
 +
<p> <hh3> <b> Proof of Concept: </b> Janet Standeven </hh3> </p>
  
 
<h2> Wiki </h2>
 
<h2> Wiki </h2>
−
<p> Neha Balachandran, Jackson Harris </p>
+
<p><hh3> <b> Design: </b> Neha Balachandran </hh3></p>
 +
<p><hh3> <b> Design Support: </b> Sara Cleland, Jackson Harris, Arjun Bhatt </hh3></p>
 +
<p><hh3> <b> Information/Writing: </b> Arjun Bhatt, Jack Kwon, Natalie Shih, Nivi Minjur, Janet Standeven
 +
<p><hh3> <b> Pictures/Diagrams: </b> Arjun Bhatt
  
 
<h2> Design </h2>
 
<h2> Design </h2>
−
<p> <b> Spiritwear, Banner, Animations: </b> Elynna Chang </p>
+
<p> <hh3> <b> Spiritwear, Banner, Animations: </b> Elynna Chang </hh3></p>
−
<p> <b> Poster: </b> Alyssa Franklin, Lauren Hong, Julia Leveille, Noora Chandasir </p>
+
<p> <hh3> <b> Poster: </b> Alyssa Franklin, Lauren Hong, Julia Leveille, Noora Chandasir</hh3> </p>
−
<p> <b> Handouts: </b> Sara Cleland, Lubna Orberger </p>
+
<p> <hh3> <b> Handouts: </b> Sara Cleland, Lubna Orberger </hh3></p>
  
 
<h2> Outreach </h2>
 
<h2> Outreach </h2>
−
<p> <b> Atlanta Science Festival:</b> Noor Sohal, Elynna Chang, Neha Balachandran </p>
+
<p> <hh3> <b> Atlanta Science Festival: </b> Noor Sohal, Elynna Chang, Neha Balachandran </hh3></p>
−
<p><b> Building with Biology:</b> Nivi Minjur, Noora Chandasir, David Standeven, Natalie Shih </p>
+
<p> <hh3> <b> Building with Biology: </b> Nivi Minjur, Noora Chandasir, David Standeven, Natalie Shih </hh3></p>
−
<p><b> RESA: </b> Noor Sohal, Neha Balachandran </p>
+
<p> <hh3> <b> RESA: </b> Noor Sohal, Neha Balachandran </hh3></p>
−
<p><b> Next Generation Focus:</b> Neha Balachandran </p>
+
<p> <hh3> <b> Next Generation Focus: </b> Neha Balachandran</hh3> </p>
−
<p> <b>CHD Walk: </b>Noora Chandasir </p>
+
<p> <hh3> <b>CHD Walk: </b>Noora Chandasir</hh3> </p>
−
<p> <b>Sharon Science Day:</b> Sara Cleland </p>
+
<p> <hh3> <b>Sharon Science Day: </b> Sara Cleland</hh3> </p>
−
 
+
  
 
<h2>Presentation</h2>
 
<h2>Presentation</h2>
−
<p><b>Presenters: </b>Neha Balachandran, Arjun Bhatt, Elynna Chang</p>
+
<p> <hh3> <b>Presenters: </b>Arjun Bhatt, Neha Balachandran, Elynna Chang</hh3></p>
−
<p><b>Script/Other Help: </b>Jack Kwon, Lauren Hong, Jackson Harris</p>
+
<p> <hh3> <b>Script/Other Help: </b>Jack Kwon, Lauren Hong, Jackson Harris</hh3></p>
 
<br>
 
<br>
  
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<h2> General Support </h2>
 
<h2> General Support </h2>
−
<p><b>Mark Styczynski-</b> Associate Professor at Georgia Institute of Technology </p>
+
<p><hh3> <b>Mark Styczynski: </b> Associate Professor at Georgia Institute of Technology </hh3></p>
−
<p> <b>Monica McNerney - </b>Graduate Student at Georgia Institute of Technology </p>
+
<p> <hh3> <b>Monica McNerney: </b>Doctoral Student at Georgia Institute of Technology</hh3> </p>
−
<p><b>Dan Watstein- </b>Graduate Student at Georgia Institute of Technology </p>
+
<p><hh3> <b>Dan Watstein: </b>Doctoral Candidate at Georgia Institute of Technology </hh3></p>
 +
<p><hh3> <b>2015 Lambert iGEM Seniors: </b> Noor Sohal, Lily Ge, Hanna Minot, Lauren Pan, and Sarah Rupert </hh3></p>
 +
 
  
 
<h2> Parts Support </h2>
 
<h2> Parts Support </h2>
−
<p><b>Snapgene- </b>Software for sequence analysis</p>
+
<p><hh3> <b>Snapgene: </b>Software for sequence analysis</hh3></p>
−
<p><b>IDT- </b>Synthesis of g blocks</p>
+
<p><hh3> <b>IDT: </b>Synthesis of g blocks</hh3></p>
  
  
−
<h2> Funding Support </h2>
+
<h2> Funding/Materials Support </h2>
−
<p>Lambert High School</p>
+
<p><hh3> Lambert High School</hh3></p>
−
<p>Johns Creek Chick fil A</p>
+
<p><hh3> National Science Foundation Grant #1254382</hh3> </p>
−
<p>National Science Foundation Grant #1254382 </p>
+
<p><hh3> Siemens</hh3></p>
−
<p>Siemens</p>
+
<p><hh3> AGCO</hh3></p>
−
<p>AGCO</p>
+
<p><hh3> Franklin Technologies</hh3></p>
−
<p>Franklin Technologies</p>
+
<p><hh3> Gofundme</hh3></p>
−
<p>Gofundme</p>
+
<p><hh3> Johns Creek Chick fil A</hh3></p>
 +
<p><hh3> Rosco: Roscolux </hh3></p>
  
 
<h2> Wiki Support </h2>
 
<h2> Wiki Support </h2>
−
<p>Joel Joseprabu- Wiki Formatting </p>
+
<p><hh3> Joel Joseprabu: Wiki Formatting</hh3> </p>
−
 
+
<p><hh3> Balachandran Srinivasan: Wiki Formatting</hh3> </p>
  
 
<h2> Outreach Support </h2>
 
<h2> Outreach Support </h2>
−
<p> Next Generation Focus/ Grace Chapel Hill Church</p>
+
<p> <hh3> Next Generation Focus/ Grace Chapel Hill Church</hh3></p>
−
<p>Atlanta Science Festival</p>
+
<p> <hh3> Atlanta Science Festival</hh3></p>
−
<p> Maker Faire </p>
+
<p> <hh3> Atlanta Maker Faire </hh3></p>
−
<p> Sharon Elementary School </p>
+
<p> <hh3> Sharon Elementary School </hh3></p>
  
  
 
<h2> Sources </h2>
 
<h2> Sources </h2>
−
 
+
<p>And, S. A. (2009, February 13). Sarita Ahlawat. ClpXP Degrades SsrA-tagged proteins in S.pneumoniae.Retrieved Summer, 2016, from http://jb.asm.org/content/191/8/2894.full
 +
<br><br>
 +
Andersen , J.B. , Sternberg , C. , Poulsen , L.K. , Bjorn , S.P. , Givskov , M. , and Molin , S. ( 1998 ) New unstable variants of green fluorescent protein for studies of transient gene expression in bacteria . Appl Environ Microbiol 64 : 2240 – 2246 .
 +
<br><br>
 +
Baker, T. A., & Sauer, R. T. (2011, June 27). ClpXP, an ATP-powered unfolding and protein-degradation machine. Retrieved Summer, 2016, from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3209554/
 +
<br><br>
 +
Bar-Nun, S., & Glickman, M. H. (2012). Proteasomal AAA-ATPases: Structure and function. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1823(1), 67–82. doi:10.1016/j.bbamcr.2011.07.009. Retrieved Summer, 2016 from http://www.sciencedirect.com/science/article/pii/S0167488911001984
 +
<br><br>
 +
Bohn , C. , Binet , E. , and Bouloc , P. ( 2002 ) Screening for stabilization of proteins with a trans-translation signature in Escherichia coli selects for inactivation of the ClpXP protease . Mol Genet Genomics 266 : 827 –831 .
 +
<br><br>
 +
Burton , R.E. , Siddiqui , S.M. , Kim , Y.I. , Baker , T.A. , and Sauer , R.T. ( 2001 ) Effects of protein stability and structure on substrate processing by the ClpXP unfolding and degradation machine . EMBO J 20 : 3092 –3100 .
 +
<br><br>
 +
Ciechanover, A. (2005). Cell death and differentiation - abstract of article: Intracellular protein degradation: From a vague idea thru the lysosome and the ubiquitin-proteasome system and onto human diseases and drug targeting[ast]. Cell Death & Differentiation, 12(9), 1178–1190. doi:10.1038/sj.cdd.4401692
 +
<br><br>
 +
Cooper, G. M. (2000). Protein degradation. Retrieved Summer, 2016 from http://www.ncbi.nlm.nih.gov/books/NBK9957/
 +
<br><br>
 +
Dhakar, L. (n.d.). Image Color Picker (Z. A., Ed.). Retrieved October 10, 2016, from http://www.colorcodepicker.com/
 +
<br><br>
 +
Farrell, C., Grossman, A., & Sauer, R. (2005). Cytoplasmic degradation of ssrA-tagged proteins.Molecular microbiology., 57(6), 1750–61. Retrieved from http://www.ncbi.nlm.nih.gov/pubmed/16135238
 +
<br><br>
 +
Flynn , J.M. , Levchenko , I. , Seidel , M. , Wickner , S.H. , Sauer , R.T. , and Baker , T.A. ( 2001 ) Overlapping recognition determinants within the ssrA degradation tag allow modulation of proteolysis . Proc Natl Acad Sci USA 11 : 10584 – 10589.
 +
<br><br>
 +
Georgia Institute of Technology. (2015, September 1). “Bacterial litmus Test” provides inexpensive measurement of Micronutrients. Retrieved from GT News Center, http://www.news.gatech.edu/2015/09/01/bacterial-litmus-test-provides-inexpensive-measurement-micronutrients
 +
<br><br>
 +
Goldberg, A.L., A.S. Menon, S. Goff and D.T. Chin. 1987. The mechanism and regulation of the ATP-dependent protease La from Escherichia coli. Biochem. Soc. Trans. 15: 809-811. Retrieved October 1, 2016 from http://www.fao.org/wairdocs/ilri/x5550e/x5550e0d.htm
 +
<br><br>
 +
Hwang BJ, Woo KM, Goldberg AL, Chung CH. Protease Ti, a new ATP-dependent protease in Escherichia coli,contains protein-activated ATPase and proteolytic functions in distinct subunits. J Biol Chem. 1988;263:8727–8734.
 +
<br><br>
 +
Katayama-Fujimura Y, Gottesman S, Maurizi MR. A multiple-component, ATP-dependent protease from Escherichia coli. J Biol Chem. 1987;262:4477–4485.
 +
<br><br>
 +
Landry, B. P., & Stöckel, J. (2013). Use of degradation tags to control protein levels in the Cyanobacterium Synechocystis sp. Strain PCC 6803. Applied and Environmental Microbiology,79(8), 2833–2835. doi:10.1128/AEM.03741-12
 +
<br><br>
 +
Léa, D. (2016). Les meilleures banques en ligne - Banque en ligne de l'Université Cefi. Retrieved October 18, 2016, from http://univ-cefi.fr/les-meilleures-banques-en-ligne.html
 +
<br><br>
 +
Lee C, Schwartz MP, Prakash S, Iwakura M, Matouschek A. ATP-Dependent Proteases Degrade Their Substrates by Processively Unraveling Them from the Degradation Signal.
 +
<br><br>
 +
McNerney, M. P., Watstein, D. M., & Styczynski, M. P. (2015). Precision metabolic engineering: The design of responsive, selective, and controllable metabolic systems. Metabolic Engineering, 31, 123–131. doi:10.1016/j.ymben.2015.06.011
 +
<br><br>
 +
Minikel, E. V. (2013, June 11). Basics of protein degradation. Retrieved Summer, 2016, from http://www.cureffi.org/2013/07/11/basics-of-protein-degradation/
 +
<br><br>
 +
Mogk A, Schmidt R, Bukau B. The N-end rule pathway for regulated proteolysis: prokaryotic and eukaryotic strategies. Trends Cell Biol. 2007;17:165–172.
 +
<br><br>
 +
Purcell, O., Grierson, C. S., Bernardo, M. di, & Savery, N. J. (2012). Temperature dependence of ssrA-tag mediated protein degradation. Journal of Biological Engineering, 6(1), . doi:10.1186/1754-1611-6-10
 +
<br><br>
 +
Purple color codes. (n.d.). Retrieved October 10, 2016, from http://www.rapidtables.com/web/color/purple-color.htm
 +
<br><br>
 +
RGB Color Gradient Maker. (n.d.). Retrieved October 10, 2016, from http://www.perbang.dk/rgbgradient/
 +
<br><br>
 +
Schrader, E. K., Harstad, K. G., & Matouschek, A. (n.d.). Targeting proteins for degradation. , 5(11), . Retrieved from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4228941/
 +
<br><br>
 +
Snider, J., Thibault, G., & Houry, W. A. (2008). The AAA+ superfamily of functionally diverse proteins. , 9(4), . Retrieved Summer, 2016 from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2643927/
 +
<br><br>
 +
Tamura, K., Shimada, T., Ono, E., Tanaka, Y., Nagatani, A., Higashi, S., . . . Hara-Nishimura, I. (2003, September). Why green fluorescent fusion proteins have not been observed in the vacuoles of higher plants. The Plant Journal, 35(4), 545-555. doi:10.1046/j.1365-313X.2003.01822.x
 +
<br><br>
 +
Tanaka K. The proteasome: overview of structure and functions. Proc Jpn Acad Ser B Phys Biol Sci.2009;85:12–36.
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<br><br>
 +
Tao, L., & Biswas, I. (2015). Degradation of SsrA-tagged proteins in streptococci. , 161(Pt 4),. Retrieved September 9, 2016 from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4857447/
 +
<br><br>
 +
Tu, D., Lee, J., Ozdere, T., Lee, T. J., & You, L. (2007, January ). Engineering Genetic Circuits: Foundations and Applications. Retrieved from http://people.duke.edu/~you/publications/Tu_etal_SyntheticBiology.pdf
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<br><br>
 +
Watstein, D. M., McNerney, M. P., & Styczynski, M. P. (2015). Precise metabolic engineering of carotenoid biosynthesis in Escherichia coli towards a low-cost biosensor. Metabolic Engineering,31, 171–180. doi:10.1016/j.ymben.2015.06.007
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<a href="https://www.gofundme.com/"><img src="https://static.igem.org/mediawiki/2016/f/f6/T--LambertGA--gofundme.jpg" class="transparent" style="height:100px"></a>
 
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<a href="https://www.rosco.com/us/index.cfm"><img src="https://static.igem.org/mediawiki/2015/9/98/Lambert_roscologo.jpg" class="transparent" style="width:200px;height:45px"></a>
  
  

Latest revision as of 20:25, 24 December 2016


Attributions and Acknowledgements


Attributions

Research

Constructs: Arjun Bhatt, Jack Kwon

Measurement Model: Elynna Chang, Noora Chandasir, David Standeven, Jackson Harris

Labwork

Arjun Bhatt, Jack Kwon, Sara Cleland, Julia Leveille, Alyssa Franklin, Lauren Hong, Jackson Harris, Kevin Tao, David Standeven

Proof of Concept: Janet Standeven

Wiki

Design: Neha Balachandran

Design Support: Sara Cleland, Jackson Harris, Arjun Bhatt

Information/Writing: Arjun Bhatt, Jack Kwon, Natalie Shih, Nivi Minjur, Janet Standeven

Pictures/Diagrams: Arjun Bhatt

Design

Spiritwear, Banner, Animations: Elynna Chang

Poster: Alyssa Franklin, Lauren Hong, Julia Leveille, Noora Chandasir

Handouts: Sara Cleland, Lubna Orberger

Outreach

Atlanta Science Festival: Noor Sohal, Elynna Chang, Neha Balachandran

Building with Biology: Nivi Minjur, Noora Chandasir, David Standeven, Natalie Shih

RESA: Noor Sohal, Neha Balachandran

Next Generation Focus: Neha Balachandran

CHD Walk: Noora Chandasir

Sharon Science Day: Sara Cleland

Presentation

Presenters: Arjun Bhatt, Neha Balachandran, Elynna Chang

Script/Other Help: Jack Kwon, Lauren Hong, Jackson Harris


Acknowledgements

General Support

Mark Styczynski: Associate Professor at Georgia Institute of Technology

Monica McNerney: Doctoral Student at Georgia Institute of Technology

Dan Watstein: Doctoral Candidate at Georgia Institute of Technology

2015 Lambert iGEM Seniors: Noor Sohal, Lily Ge, Hanna Minot, Lauren Pan, and Sarah Rupert

Parts Support

Snapgene: Software for sequence analysis

IDT: Synthesis of g blocks

Funding/Materials Support

Lambert High School

National Science Foundation Grant #1254382

Siemens

AGCO

Franklin Technologies

Gofundme

Johns Creek Chick fil A

Rosco: Roscolux

Wiki Support

Joel Joseprabu: Wiki Formatting

Balachandran Srinivasan: Wiki Formatting

Outreach Support

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Sources

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