Difference between revisions of "Team:NCKU Tainan/Safety"
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| − | <style>@font-face { font-family: 'NotoSansCJKtc-Regular'; src: url("/wiki/images/0/0b/T--NCKU_Tainan--NotoSansCJKtc-Regular.woff") format('woff');}</style><nav class="navbar navbar-default"><div | + | <style>@font-face { font-family: 'NotoSansCJKtc-Regular'; src: url("/wiki/images/0/0b/T--NCKU_Tainan--NotoSansCJKtc-Regular.woff") format('woff');}</style><nav class="navbar navbar-default"><div id="navbar-container" class="container-fluid"> <div class="navbar-header"> <button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false"> <span class="sr-only">Toggle navigation</span> <span class="icon-bar"></span> <span class="icon-bar"></span> <span class="icon-bar"></span> </button> <a class="navbar-brand" href="/Team:NCKU_Tainan"> <h1>NCKU</h1><h4>Tainan</h4> </a> </div> <div id="navbar" class="navbar-collapse collapse"> <ul class="nav navbar-nav"> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu1" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="">Project</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu2"> <li><a href="/Team:NCKU_Tainan/Project">Background</a></li> <li><a href="/Team:NCKU_Tainan/Description">Description</a></li> <li><a href="/Team:NCKU_Tainan/Results">Results</a></li> <li><a href="/Team:NCKU_Tainan/Model">Modeling</a></li> <li><a href="/Team:NCKU_Tainan/Parts">Parts</a></li> </ul> </li> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu2" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="">Device</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu2"> <li><a href="/Team:NCKU_Tainan/Hardware">Hardware</a></li> <li><a href="/Team:NCKU_Tainan/Software">Software</a></li> <li><a href="/Team:NCKU_Tainan/Demonstrate">Demonstrate</a></li> </ul> </li> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu3" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="">Judging</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu3"> <li><a href="/Team:NCKU_Tainan/Medal">Medal</a></li> <li><a href="/Team:NCKU_Tainan/Safety">Safety</a></li> </ul> </li> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu4" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="/Team:NCKU_Tainan/Team">Team</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu4"> <li><a href="/Team:NCKU_Tainan/Team">Team</a></li> <li><a href="/Team:NCKU_Tainan/Attributions">Attributions</a></li> <li><a href="/Team:NCKU_Tainan/Acknowledgement">Acknowledgement</a></li> <li><a href="/Team:NCKU_Tainan/Collaborations">Collaborations</a></li> </ul> </li> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu5" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="/Team:NCKU_Tainan/Human_Practices">Human Practices</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu5"> <li><a href="/Team:NCKU_Tainan/Human_Practices">Overview</a></li> <li><a href="/Team:NCKU_Tainan/Integrated_Practices">Integrated Practices</a></li> <li><a href="/Team:NCKU_Tainan/Engagement">Engagement</a></li> </ul> </li> <li> <a class="dropdown-toggle" type="button" id="dropdownMenu6" data-toggle="dropdown" aria-haspopup="true" aria-expa="" nded="true" href="">Notebook</a><div class="nav-underline"></div> <ul class="dropdown-menu" aria-labelledby="dropdownMenu6"> <li><a href="/Team:NCKU_Tainan/Notebook_Construction">Construction</a></li> <li><a href="/Team:NCKU_Tainan/Notebook_Functional_Test">Functional Test</a></li> <li><a href="/Team:NCKU_Tainan/Notebook_Device_Design">Device Design</a></li> <li><a href="/Team:NCKU_Tainan/Notebook_Protocols">Protocols</a></li> <li><a href="/Team:NCKU_Tainan/Notebook_Model">Model</a></li> </ul> </li> </ul> <ul class="nav navbar-nav navbar-right"> </ul> </div><!--/.nav-collapse --></div><!--/.container-fluid --></nav><div id="container-big"><div id="iGEMbar"></div><div id="line-left"></div><div id="line-left2"></div><div id="line-right"></div><div id="photo-left"></div></div><!--/.container-big --> <style> |
#photo-left { background-image: url("/wiki/images/d/d6/T--NCKU_Tainan--Safety.png"); } | #photo-left { background-image: url("/wiki/images/d/d6/T--NCKU_Tainan--Safety.png"); } | ||
</style> | </style> | ||
<div class="container-fluid" style="margin-top:100px"> | <div class="container-fluid" style="margin-top:100px"> | ||
| − | <div class="head">JUDGING / | + | <div class="head">JUDGING / Safe Lab</div> |
<div class="content row"> | <div class="content row"> | ||
<div class="col-md-9"> | <div class="col-md-9"> | ||
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<div class="title-line" id="method">Safety Issues</div> | <div class="title-line" id="method">Safety Issues</div> | ||
<h5>How did we address the safety issues in our project?</h5> | <h5>How did we address the safety issues in our project?</h5> | ||
| − | <ul><li> | + | <ul><li><b>Non-pathogenic chassis</b>, i.e. <i>E. coli</i> DH5α, <i>E. coli</i> (DE3), were chosen.</li> |
<li>The chassis is in small <b>enclosed space</b> as a barrier to prevent contamination.</li> | <li>The chassis is in small <b>enclosed space</b> as a barrier to prevent contamination.</li> | ||
| − | <li><b>"Suicide-gene inducers"</b> in the enclosed space | + | <li><b>"Suicide-gene inducers"</b> in the enclosed space can induce expression of the suicide gene to kill <i>E. coli</i> in the bio-sensing strip.</li> |
</ul> | </ul> | ||
<div class="title-line" id="plan">Safety Plan</div> | <div class="title-line" id="plan">Safety Plan</div> | ||
| − | <p>Our <i>E.coli</i> can sense urea glucose. When the glucose level is high, the bacteria can express red fluorescent | + | <p>Our <i>E. coli</i> can sense urea glucose. When the glucose level is high, the bacteria can express red fluorescent proteins (RFP) as a reporter to give a signal which can be detected at the state of excitation. After the detection, the “suicide-gene inducers”, arabinose, induce the P<sub>BAD</sub> promoter (<a href="http://parts.igem.org/Part:BBa_K206000">BBa_K206000</a>) and then activate the transcription of the lysis gene (<a href="http://parts.igem.org/Part:BBa_K117000">BBa_K117000</a>). The functional assays are showed in <a href="/Team:NCKU_Tainan/Results#safety">Bio-Safety System (Project/ Results)</a>.</p> |
<img src="/wiki/images/c/c4/T--NCKU_Tainan--safety5.png"> | <img src="/wiki/images/c/c4/T--NCKU_Tainan--safety5.png"> | ||
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<p>We operated the project in the Biosafety Level 1 (BSL-1) Lab. The space is suitable for experiments in all of our chassis which are Risk Group 1 organisms. Additionally, we always handled biological materials in a laminar flow hood. All of biowastes were autoclaved at the typical 121 °C/15 psi for 15 minutes.</p> | <p>We operated the project in the Biosafety Level 1 (BSL-1) Lab. The space is suitable for experiments in all of our chassis which are Risk Group 1 organisms. Additionally, we always handled biological materials in a laminar flow hood. All of biowastes were autoclaved at the typical 121 °C/15 psi for 15 minutes.</p> | ||
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<h5>Obeying the laws and regulations of biosafety in our Country/ University</h5> | <h5>Obeying the laws and regulations of biosafety in our Country/ University</h5> | ||
<p>Regarding the Environmental Protection, Safety and Health Center is responsible for the safety of biology labs at National Cheng Kung University (<a href="/wiki/images/6/6c/T--NCKU_Tainan--ref3.pdf" target="_blank">Guidelines for Laboratory Biosafety</a>). And Centers for Disease Control (CDC) is the department to govern biosafety for research laboratories in our country (<a href="/wiki/images/a/a1/T--NCKU_Tainan--ref4.pdf" target="_blank">Laboratory Biosafety Management: A Compilation of Regulations and Administrative Guidance</a>).</p> | <p>Regarding the Environmental Protection, Safety and Health Center is responsible for the safety of biology labs at National Cheng Kung University (<a href="/wiki/images/6/6c/T--NCKU_Tainan--ref3.pdf" target="_blank">Guidelines for Laboratory Biosafety</a>). And Centers for Disease Control (CDC) is the department to govern biosafety for research laboratories in our country (<a href="/wiki/images/a/a1/T--NCKU_Tainan--ref4.pdf" target="_blank">Laboratory Biosafety Management: A Compilation of Regulations and Administrative Guidance</a>).</p> | ||
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<li><a href="#" onclick="return toEvent('plan');">Safety Plan</a></li> | <li><a href="#" onclick="return toEvent('plan');">Safety Plan</a></li> | ||
<li><a href="#" onclick="return toEvent('lab');">Safety Lab</a></li> | <li><a href="#" onclick="return toEvent('lab');">Safety Lab</a></li> | ||
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Revision as of 16:57, 18 October 2016
JUDGING / Safe Lab
Safety
Safety Issues
How did we address the safety issues in our project?
- Non-pathogenic chassis, i.e. E. coli DH5α, E. coli (DE3), were chosen.
- The chassis is in small enclosed space as a barrier to prevent contamination.
- "Suicide-gene inducers" in the enclosed space can induce expression of the suicide gene to kill E. coli in the bio-sensing strip.
Safety Plan
Our E. coli can sense urea glucose. When the glucose level is high, the bacteria can express red fluorescent proteins (RFP) as a reporter to give a signal which can be detected at the state of excitation. After the detection, the “suicide-gene inducers”, arabinose, induce the PBAD promoter (BBa_K206000) and then activate the transcription of the lysis gene (BBa_K117000). The functional assays are showed in Bio-Safety System (Project/ Results).
Safe Lab
Building a safe lab
We operated the project in the Biosafety Level 1 (BSL-1) Lab. The space is suitable for experiments in all of our chassis which are Risk Group 1 organisms. Additionally, we always handled biological materials in a laminar flow hood. All of biowastes were autoclaved at the typical 121 °C/15 psi for 15 minutes.
Obeying the laws and regulations of biosafety in our Country/ University
Regarding the Environmental Protection, Safety and Health Center is responsible for the safety of biology labs at National Cheng Kung University (Guidelines for Laboratory Biosafety). And Centers for Disease Control (CDC) is the department to govern biosafety for research laboratories in our country (Laboratory Biosafety Management: A Compilation of Regulations and Administrative Guidance).
