Difference between revisions of "Team:Stanford-Brown/Attributions"

 
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<li><a href="https://2016.igem.org/Team:Stanford-Brown/Engagement">Outreach</a></li>
 
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<li><a href="https://2016.igem.org/Team:Stanford-Brown/SB16_Practices_Exploration">Exploration</a></li>
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<li><a href="https://2016.igem.org/Team:Stanford-Brown/SB16_Practices_Exploration">Life Beyond the Lab</a></li>
 
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<h2 class="subHead">Funding</h2>
 
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<div class="col-sm-7 pagetext-L"><div class="text">
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<div class="col-sm-12 pagetext">
  
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<h3>Funding</h3>
 
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<br>We are very grateful for financial support from Stanford University REU, Brown University UTRA, NASA Ames Research Center Directors Discretionary Fund, Ames' Office of the Chief Technologist, Rhode Island Space Grant<br>
 
  
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<h3>Project Support and Advice</h3>
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We are very grateful for financial support from Stanford University REU, Stanford VPUE Grant for Undergraduate Research, Brown University UTRA, NASA Space Technology Mission Directorate Early Stage Innovation, and the Rhode Island Space Grant Consortium.<br><br>
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<br>Thank you to our advisors! Especially Trevor! who was always there for us even on those late nights.<br>
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</div>
  
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<h3>Functional Nucleic Acid Advice</h3><br>  
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<div class="row">
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<br>Mark Ditzler, NASA Research Scientist
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        <div class="col-sm-3">
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<br>Christina Smolke, Stanford University Associate Professor of Bioengineering<br>
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            <img src="https://static.igem.org/mediawiki/2016/a/a4/T--Stanford-Brown--Stanford_Logo.gif" alt="Stanford" height="200">
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</div>
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<div class="col-sm-3">
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            <img src="https://static.igem.org/mediawiki/2016/4/4f/T--Stanford-Brown--Brown.png" alt="Brown" height="200">
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<div class="col-sm-3">
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            <img src="https://static.igem.org/mediawiki/2016/5/58/RISG.png" alt="RISG" height="200">
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</div>
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<div class="col-sm-3">
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            <img src="https://static.igem.org/mediawiki/2016/7/79/T--Stanford-Brown--NASA.png" alt="NASA" height="200">
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</div>
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</div>
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<br><br>
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<h2 class="subHead">Team Member Contributions</h2>
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<div class="row">
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<div class="col-sm-12 pagetext">
  
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<h3>Melanin Production Metabolic Engineering</h3>
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All experiments were conducted by the team members and all images are originally created unless otherwise noted. List of sub-project attributions: <br>
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Guillermo Gosset, Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, Universidad Nacional Autónoma de México<br>
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<br>Other things to mention:
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<ul>
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<br>General Support
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<li>Collagen/Elastin: Charles Gleason, Anna Le, Eric Liu</li>
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<br>Project support and advice
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<li>p-Aramid: Eric Liu, Anna Le, Charles Gleason</li>
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<br>Fundraising help and advice
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<li>Latex: Gordon Sun, Taylor Sihavong, Elias Robinson</li>
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<br>Lab support
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<li>Nylon: Charles Gleason, Anna Le, Eric Liu</li>
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<br>Difficult technique support
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<li>UV Protection: Elias Robinson, Michael Becich</li>
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<br>Project Advisor support
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<li>Gas Production: Taylor Sihavong</li>
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<br>Wiki support: Forrest Tran
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<li>Chromoproteins: Cynthia Hale-Philips, Theresa Sievert, Taylor Pullinger</li>
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<br>Presentation coaching
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<li>Fluorophore-Quencher: Michael Becich</li>
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<br>Human Practices support
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<li>IRES: Julia Gross, Amy Weissenbach</li>
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<br>Thanks and acknowledgements for all other people involved in helping make a successful iGEM team!
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<li>Aptamer Purification: Amy Weissenbach, Julia Gross, Michael Becich</li>
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<li>Wiki Architect: Taylor Pullinger (with support from former team member, Forrest Tran, Stanford-Brown iGEM 2015)</li>
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<li>Graphic Design: Taylor Sihavong, Taylor Pullinger</li>
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<li>Human Practices Liason: Amy Weissenbach</li>
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<li>Modeling/Software: Gordon Sun, Eric Liu, Michael Becich</li>
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</ul>
 
<br>
 
<br>
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We would like to thank Dr. Lynn Rothschild, Dr. Kara Rogers, Dr. Gary Wessel, Dr. Kosuke Fujishima, Dr. Ivan Paulino-Lima, Dr. Mark Ditzler, Griffin McCutcheon, Trevor! Kalkus, Ryan Kent, Jesica Navarrete, Simon Vecchioni, Jim Head, Jill Tartar, Margaret Race, Maria Chavez, Ames Chief Technologist Office, NASA Ames Center Investment Fund, Brown UTRA Fellowship, Stanford VPUE Grant for Undergraduate Research, Rhode Island Space Grant,
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</div>
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<h3>Company Sponsors</h3>
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Biomatters Ltd., Flexicon, and SnapGene
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</div>
 
</div>
  
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<h3>Funding</h3>
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<h2 class="subHead">Project Support and Advice</h2>
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        <p>We are very grateful for financial support from Stanford University REU, Brown University UTRA, NASA Ames Research Center Directors Discretionary Fund, Ames' Office of the  Chief Technologist, Rhode Island Space Grant</p> 
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        <h3>Project support and advice</h3> Our advisors!
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        <h3> GC-MS Support and Funding</h3> Allis Chien, Stanford University Mass Spectrometry
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        <h3>HYDRA technique support</h3> Dr. Xi Chen from the Sahin lab at Columbia
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<h3>P(3HB) extraction advice</h3> Asif Rahman, Ryan Putman, NASA and USU iGEM team
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        <h3>Thanks and acknowledgements for all other people involved in helping make a successful iGEM team</h3>
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        <h3>Company Sponsors</h3>
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<div class="row">
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<div class="col-sm-12 pagetext">
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Thank you to our advisors! Especially Trevor! who was always there for us even on those late nights.<br><br>
  
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<i>Functional Nucleic Acid Advice</i><br>
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          <div class="row">
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Mark Ditzler, NASA Research Scientist<br>
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Christina Smolke, Stanford University Associate Professor of Bioengineering<br><br>
 +
 
 +
<i>Melanin Production Metabolic Engineering</i><br>
 +
Guillermo Gosset, Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, Universidad Nacional Autónoma de México<br><br>
 +
 
 +
<i>Protein Extraction Advice</i><br>
 +
Jesica Navarrete<br><br>
 +
 
 +
<i>Microscopy Instruction</i><br>
 +
Ivan Paulino-Lima<br><br>
 +
 
 +
<i>Modeling</i><br>
 +
Nils J. H. Averesch<br><br>
 +
 
 +
<i>General Lab Instruction/Troubleshooting</i><br>
 +
Trevor! Kalkus <br>
 +
Griffin McCutcheon<br>
 +
Ryan Kent <br>
 +
Kosuke Fujishima<br>
 +
Jesica Navarrete<br>
 +
Kara Rogers<br><br>
 +
 
 +
 
 +
We appreciate all the people involved in helping make a successful iGEM team!
 
<br>
 
<br>
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  <div class="col-sm-2">
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We would like to thank Dr. Lynn Rothschild, Dr. Kara Rogers, Dr. Gary Wessel, Dr. Kosuke Fujishima, Dr. Ivan Paulino-Lima, Dr. Mark Ditzler, Griffin McCutcheon, Trevor! Kalkus (Stanford-Brown iGEM 2013), Ryan Kent (Brown-Stanford iGEM 2011), Jesica Navarrete, Simon Vecchioni (Stanford-Brown iGEM 2013), Jim Head, Jill Tartar, Margaret Race, and Maria Chavez.
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<br>
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</div>
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</div>
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<h2 class="subHead">Company Sponsors</h2>
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<div class="row">
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<div class="col-sm-2">
 
             <img src="https://static.igem.org/mediawiki/2015/f/ff/SB2015_DNA2.0.jpg" alt="DNA 2.0" class="img-responsive" height="100">
 
             <img src="https://static.igem.org/mediawiki/2015/f/ff/SB2015_DNA2.0.jpg" alt="DNA 2.0" class="img-responsive" height="100">
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<div class="col-sm-2">
 
<div class="col-sm-2">
 
             <img src="https://static.igem.org/mediawiki/2015/a/ac/SB_geneious_logo.png" alt="geneious" class="img-responsive" height="100">
 
             <img src="https://static.igem.org/mediawiki/2015/a/ac/SB_geneious_logo.png" alt="geneious" class="img-responsive" height="100">
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           </div> <br>
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           </div>
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           <div class="col-sm-2">
 
           <div class="col-sm-2">
 
             <img src="https://static.igem.org/mediawiki/2015/2/2c/SB_IDT_Logo.png" alt="IDT" class="img-responsive" height="100">
 
             <img src="https://static.igem.org/mediawiki/2015/2/2c/SB_IDT_Logo.png" alt="IDT" class="img-responsive" height="100">
 
           </div>
 
           </div>
  
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<div class="col-sm-2">
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            <img src="https://static.igem.org/mediawiki/2016/a/af/T--Stanford-Brown--NEB.png" alt="NEB" class="img-responsive" height="100">
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</div>
  
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<div class="col-sm-2">
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            <img src="https://static.igem.org/mediawiki/2016/9/94/T--Stanford-Brown--SnapGene.png" alt="SnapGene" class="img-responsive" height="100">
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</div> <!--END col-sm-7-->
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</div>
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<div class="col-sm-5 imgcol-R">
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<img src="https://static.igem.org/mediawiki/2016/7/79/T--Stanford-Brown--NASA.png" align="bottom" width="80" class="img-R">
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                        <img src="https://static.igem.org/mediawiki/2016/1/1a/T--Stanford-Brown--Benchling.png" align="bottom" width="80" class="img-R">
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                        <img src="https://static.igem.org/mediawiki/2016/a/a4/T--Stanford-Brown--Stanford_Logo.gif" align="bottom" width="80" class="img-R">
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                        <img src="https://static.igem.org/mediawiki/2016/0/02/T--Stanford-Brown--Geneious.png" width="80" align="bottom" class="img-R">
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                        <img src="https://static.igem.org/mediawiki/2016/a/af/T--Stanford-Brown--NEB.png" width="80" align="bottom" class="img-R">
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                        <img src="https://static.igem.org/mediawiki/2016/9/94/T--Stanford-Brown--SnapGene.png" width="80" align="bottom" class="img-R">
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<div class="col-sm-12 pagetext">
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            <img src="https://static.igem.org/mediawiki/2016/a/a0/T--UConn--biomatters.jpg" alt="Biomatters" class="img-responsive" height="100">
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</div> <!--END col-sm-12-->
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Our institution (Stanford University) is well equipped for synthetic biology work, as an undergraduate Bioengineering program with several lab courses exists in full force. We alternated between using Dr. Lynn Rothschild's lab at the National Aeronautics and Space Administration and the open-resource Uytengsu Teaching Center in Stanford's bioengineering and chemical engineering building, Shriram. Most of the members on the Stanford side of the team became acquainted with bioengineering lab work through BIOE44 (Fundamentals for Engineering Biology Lab). This course is generally taken as a sophomore, and some of our team members took it during the fall quarter of 2015-2016 (9/21/2015-12/11/2015). Materials for this course, such as the syllabus, are readily available online: <a href="http://smolkelab.weebly.com/uploads/2/0/1/3/20135707/bioe44_syllabus_fall_2014.pdf">Here</a> is an example from 2014.<br><br>Our team brainstorms and cross-continental team Skype sessions in March 2016, where we stitched together rough subprojects and the overall theme of bioballoon. Our work in the lab did not start until late May 2016, when the Brown students ended their spring semester and travelled to California to work with the Stanford side in person. Stanford students got to lab after finishing their spring quarter in late June. All projects were begun by the Brown students, and ended by the Stanford students during the regular school year as the Jamboree approached.
 
  
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<div class="col-sm-12 pagetext last">
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Stanford University is well equipped for synthetic biology work, as an undergraduate Bioengineering program with several lab courses exists in full force. Brown University offers a Synthetic Biology Course every other year taught by Gary Wessel. We alternated between using Dr. Lynn Rothschild's lab at the National Aeronautics and Space Administration and the open-resource Uytengsu Teaching Center in Stanford's Shriram Center for Bioengineering and Chemical Engineering. Most of the members on the Stanford side of the team became acquainted with bioengineering lab work through BIOE44 (Fundamentals for Engineering Biology Lab). This course is generally taken as a sophomore, and some of our team members took it during the fall quarter of 2015-2016 (9/21/2015-12/11/2015). Materials for this course, such as the syllabus, are readily available online: <a href="http://smolkelab.weebly.com/uploads/2/0/1/3/20135707/bioe44_syllabus_fall_2014.pdf">here</a> is an example from 2014.<br>
 +
 
 +
<br>Our team had brainstorming meetings and cross-continental team Skype sessions beginning in March 2016, where we stitched together rough subprojects and the overall theme of bioballoon. Our work in the lab did not start until the beginning of June 2016, when the Brown students ended their spring semester and travelled to California to work with the Stanford side in person. Stanford students got to lab after finishing their spring quarter in late June. All projects were begun by the Brown students, and ended by the Stanford students during the regular school year as the Jamboree approached.
 
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Latest revision as of 23:39, 19 October 2016


Stanford-Brown 2016

Attributions

Funding

We are very grateful for financial support from Stanford University REU, Stanford VPUE Grant for Undergraduate Research, Brown University UTRA, NASA Space Technology Mission Directorate Early Stage Innovation, and the Rhode Island Space Grant Consortium.

Stanford
Brown
RISG
NASA


Team Member Contributions

All experiments were conducted by the team members and all images are originally created unless otherwise noted. List of sub-project attributions:
  • Collagen/Elastin: Charles Gleason, Anna Le, Eric Liu
  • p-Aramid: Eric Liu, Anna Le, Charles Gleason
  • Latex: Gordon Sun, Taylor Sihavong, Elias Robinson
  • Nylon: Charles Gleason, Anna Le, Eric Liu
  • UV Protection: Elias Robinson, Michael Becich
  • Gas Production: Taylor Sihavong
  • Chromoproteins: Cynthia Hale-Philips, Theresa Sievert, Taylor Pullinger
  • Fluorophore-Quencher: Michael Becich
  • IRES: Julia Gross, Amy Weissenbach
  • Aptamer Purification: Amy Weissenbach, Julia Gross, Michael Becich
  • Wiki Architect: Taylor Pullinger (with support from former team member, Forrest Tran, Stanford-Brown iGEM 2015)
  • Graphic Design: Taylor Sihavong, Taylor Pullinger
  • Human Practices Liason: Amy Weissenbach
  • Modeling/Software: Gordon Sun, Eric Liu, Michael Becich

Project Support and Advice

Thank you to our advisors! Especially Trevor! who was always there for us even on those late nights.

Functional Nucleic Acid Advice
Mark Ditzler, NASA Research Scientist
Christina Smolke, Stanford University Associate Professor of Bioengineering

Melanin Production Metabolic Engineering
Guillermo Gosset, Departamento de Ingeniería Celular y Biocatálisis, Instituto de Biotecnología, Universidad Nacional Autónoma de México

Protein Extraction Advice
Jesica Navarrete

Microscopy Instruction
Ivan Paulino-Lima

Modeling
Nils J. H. Averesch

General Lab Instruction/Troubleshooting
Trevor! Kalkus
Griffin McCutcheon
Ryan Kent
Kosuke Fujishima
Jesica Navarrete
Kara Rogers

We appreciate all the people involved in helping make a successful iGEM team!
We would like to thank Dr. Lynn Rothschild, Dr. Kara Rogers, Dr. Gary Wessel, Dr. Kosuke Fujishima, Dr. Ivan Paulino-Lima, Dr. Mark Ditzler, Griffin McCutcheon, Trevor! Kalkus (Stanford-Brown iGEM 2013), Ryan Kent (Brown-Stanford iGEM 2011), Jesica Navarrete, Simon Vecchioni (Stanford-Brown iGEM 2013), Jim Head, Jill Tartar, Margaret Race, and Maria Chavez.

Company Sponsors

DNA 2.0
geneious
IDT
NEB
SnapGene
Biomatters

Team Training and Project Start

Stanford University is well equipped for synthetic biology work, as an undergraduate Bioengineering program with several lab courses exists in full force. Brown University offers a Synthetic Biology Course every other year taught by Gary Wessel. We alternated between using Dr. Lynn Rothschild's lab at the National Aeronautics and Space Administration and the open-resource Uytengsu Teaching Center in Stanford's Shriram Center for Bioengineering and Chemical Engineering. Most of the members on the Stanford side of the team became acquainted with bioengineering lab work through BIOE44 (Fundamentals for Engineering Biology Lab). This course is generally taken as a sophomore, and some of our team members took it during the fall quarter of 2015-2016 (9/21/2015-12/11/2015). Materials for this course, such as the syllabus, are readily available online: here is an example from 2014.

Our team had brainstorming meetings and cross-continental team Skype sessions beginning in March 2016, where we stitched together rough subprojects and the overall theme of bioballoon. Our work in the lab did not start until the beginning of June 2016, when the Brown students ended their spring semester and travelled to California to work with the Stanford side in person. Stanford students got to lab after finishing their spring quarter in late June. All projects were begun by the Brown students, and ended by the Stanford students during the regular school year as the Jamboree approached.