Difference between revisions of "Team:LMU-TUM Munich/Part Collection"
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| + | =Signal peptide collection= | ||
To achieve the best possible secretion of our eucaryotic receptors we tested three different signal peptides for their secretion efficiency. The expression of all testing devices was regulatd by a cyto megalo virus (CMV) promotor. The secretion efficiency was tested by NanoGlo-Assay. | To achieve the best possible secretion of our eucaryotic receptors we tested three different signal peptides for their secretion efficiency. The expression of all testing devices was regulatd by a cyto megalo virus (CMV) promotor. The secretion efficiency was tested by NanoGlo-Assay. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170010 BBa_K2170010]== | |
BM40 secretory Nanoluciferase | BM40 secretory Nanoluciferase | ||
Fusion protein with Basement membrane 40 (BM40) signal peptide. | Fusion protein with Basement membrane 40 (BM40) signal peptide. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170011 BBa_K2170011]== | |
| − | + | EGFR secretory Nanoluciferase | |
Fusion protein with epidermal growth factor receptor (EGFR) signal peptide. | Fusion protein with epidermal growth factor receptor (EGFR) signal peptide. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170012 BBa_K2170012]== | |
| − | + | IgKappa secretory Nanoluciferase | |
Fusion protein with immunoglobulin Kappa (IgKappa) signal peptide. | Fusion protein with immunoglobulin Kappa (IgKappa) signal peptide. | ||
| − | + | =Eucaryotic receptor collection= | |
All eucaryotic receptors that we designed share a similar structure and were developed for use in eucaryotic cells. Due to the intracellular mRuby3 the general expression and location of the receptor can be detected by fluorescence signal. Additionaly we integrated an antibody binding site (A3C5 Tag) and a ''Strep'' Tag for better characterisation. | All eucaryotic receptors that we designed share a similar structure and were developed for use in eucaryotic cells. Due to the intracellular mRuby3 the general expression and location of the receptor can be detected by fluorescence signal. Additionaly we integrated an antibody binding site (A3C5 Tag) and a ''Strep'' Tag for better characterisation. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170000 BBa_K2170000]== | |
| − | + | Bap-NanoLuc receptor construct | |
Fusion protein with a Biotin acceptor peptide (BAP) for intracellular biotinylation by biotin ligase BirA from E. ''coli''. The Biobrick contains an internal ribosomal binding site in front of the BirA so that it, although it is part of the same mRNA, is translated seperately from the rest of the transcript. The fusion protein is directed to the cellmembrane where it presents the biotinylated BAP on the surface. At the C terminal end of the BAP a Nanoluciferase was introduced so that the correct location of the receptor could be tested by NanoGlo-Assay. | Fusion protein with a Biotin acceptor peptide (BAP) for intracellular biotinylation by biotin ligase BirA from E. ''coli''. The Biobrick contains an internal ribosomal binding site in front of the BirA so that it, although it is part of the same mRNA, is translated seperately from the rest of the transcript. The fusion protein is directed to the cellmembrane where it presents the biotinylated BAP on the surface. At the C terminal end of the BAP a Nanoluciferase was introduced so that the correct location of the receptor could be tested by NanoGlo-Assay. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170001 BBa_K2170001]== | |
| − | + | Biotin binding receptor with eMa | |
Fusion protein with an enhanced monomeric avidin (eMA). This monomeric avidin like protein is presented on the cellsurface, where it can bind extracellular biotin. | Fusion protein with an enhanced monomeric avidin (eMA). This monomeric avidin like protein is presented on the cellsurface, where it can bind extracellular biotin. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170002 BBa_K2170002]== | |
| − | + | Biotin binding receptor with scAvidin | |
Fusion protein with an single chain avidin (scAvidin). This cyclic permutated avidin is presented on the cellsurface, where it can bind extracellular biotin. | Fusion protein with an single chain avidin (scAvidin). This cyclic permutated avidin is presented on the cellsurface, where it can bind extracellular biotin. | ||
| − | + | =Procaryotic receptor collection= | |
All procaryotic receptors we designed share a similar structure. The expression is regulated by a TetR-TetO constuct which can be induced by Tetracycline. The secretion signal is an Outer membrane protein A (OmpA) signal peptide. The EspP autotransporter leads to a presentation of the receptor on the cell surface. The intruduction of the antibody binding site (A3C5 Tag) can be used as indicator for the right localisation of the receptor. | All procaryotic receptors we designed share a similar structure. The expression is regulated by a TetR-TetO constuct which can be induced by Tetracycline. The secretion signal is an Outer membrane protein A (OmpA) signal peptide. The EspP autotransporter leads to a presentation of the receptor on the cell surface. The intruduction of the antibody binding site (A3C5 Tag) can be used as indicator for the right localisation of the receptor. | ||
| − | + | ==[http://parts.igem.org/Part:BBa_K2170051 BBa_K2170051]== | |
| − | + | BAP-Nanoluc receptor construct | |
| − | + | ==[http://parts.igem.org/Part:BBa_K2170050 BBa_K2170050]== | |
| − | + | Biotin binding receptor with eMA | |
| − | + | ==[http://parts.igem.org/Part:BBa_K2170052 BBa_K2170052]== | |
| − | + | Biotin binding receptor with scAvidin | |
<groupparts>iGEM2016 LMU-TUM_Munich</groupparts> | <groupparts>iGEM2016 LMU-TUM_Munich</groupparts> | ||
{{LMU-TUM_Munich_html_end}} | {{LMU-TUM_Munich_html_end}} | ||
Revision as of 10:32, 18 October 2016
Signal peptide collection
To achieve the best possible secretion of our eucaryotic receptors we tested three different signal peptides for their secretion efficiency. The expression of all testing devices was regulatd by a cyto megalo virus (CMV) promotor. The secretion efficiency was tested by NanoGlo-Assay.
[http://parts.igem.org/Part:BBa_K2170010 BBa_K2170010]
BM40 secretory Nanoluciferase
Fusion protein with Basement membrane 40 (BM40) signal peptide.
[http://parts.igem.org/Part:BBa_K2170011 BBa_K2170011]
EGFR secretory Nanoluciferase
Fusion protein with epidermal growth factor receptor (EGFR) signal peptide.
[http://parts.igem.org/Part:BBa_K2170012 BBa_K2170012]
IgKappa secretory Nanoluciferase
Fusion protein with immunoglobulin Kappa (IgKappa) signal peptide.
Eucaryotic receptor collection
All eucaryotic receptors that we designed share a similar structure and were developed for use in eucaryotic cells. Due to the intracellular mRuby3 the general expression and location of the receptor can be detected by fluorescence signal. Additionaly we integrated an antibody binding site (A3C5 Tag) and a Strep Tag for better characterisation.
[http://parts.igem.org/Part:BBa_K2170000 BBa_K2170000]
Bap-NanoLuc receptor construct
Fusion protein with a Biotin acceptor peptide (BAP) for intracellular biotinylation by biotin ligase BirA from E. coli. The Biobrick contains an internal ribosomal binding site in front of the BirA so that it, although it is part of the same mRNA, is translated seperately from the rest of the transcript. The fusion protein is directed to the cellmembrane where it presents the biotinylated BAP on the surface. At the C terminal end of the BAP a Nanoluciferase was introduced so that the correct location of the receptor could be tested by NanoGlo-Assay.
[http://parts.igem.org/Part:BBa_K2170001 BBa_K2170001]
Biotin binding receptor with eMa
Fusion protein with an enhanced monomeric avidin (eMA). This monomeric avidin like protein is presented on the cellsurface, where it can bind extracellular biotin.
[http://parts.igem.org/Part:BBa_K2170002 BBa_K2170002]
Biotin binding receptor with scAvidin
Fusion protein with an single chain avidin (scAvidin). This cyclic permutated avidin is presented on the cellsurface, where it can bind extracellular biotin.
Procaryotic receptor collection
All procaryotic receptors we designed share a similar structure. The expression is regulated by a TetR-TetO constuct which can be induced by Tetracycline. The secretion signal is an Outer membrane protein A (OmpA) signal peptide. The EspP autotransporter leads to a presentation of the receptor on the cell surface. The intruduction of the antibody binding site (A3C5 Tag) can be used as indicator for the right localisation of the receptor.
[http://parts.igem.org/Part:BBa_K2170051 BBa_K2170051]
BAP-Nanoluc receptor construct
[http://parts.igem.org/Part:BBa_K2170050 BBa_K2170050]
Biotin binding receptor with eMA
[http://parts.igem.org/Part:BBa_K2170052 BBa_K2170052]
Biotin binding receptor with scAvidin
<groupparts>iGEM2016 LMU-TUM_Munich</groupparts>
